FC920661
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920661 vs. ExPASy Swiss-Prot
Match: RIR2_HHV1K (Ribonucleoside-diphosphate reductase small chain OS=Human herpesvirus 1 (strain KOS) GN=UL40 PE=3 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.186e-14 Identity = 57/196 (29.08%), Postives = 93/196 (47.45%), Query Frame = 1 Query: 91 PNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETV--PCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGITFSNELISRDEGLH 672 P+P+R+ + Q P I + + + W E+ D L+ E F + AF +A+D +V ENL G + + +Y Q IE HS +Y+++ ++D+ R + A T+ P + K W + + E+ I +EGIFF+ SF AI +L+ L+ SN+LISRDE +H Sbjct: 32 PDPERY-FYTSQCPDINHLRSLSILNRWLETELVFVGDEEDVSKLSEGELSFYRFLFAFLSAADDLVTENLGG-LSGLFEQKDILHYYVEQECIEVAHSRVYNIIQLVLFHNNDQARREYVA-GTINHPAIRAKVDWLEARVRECASVPEKFILMILIEGIFFAASFAAIAYLRTNNLLRVTCQSNDLISRDEAVH 224
BLAST of FC920661 vs. ExPASy Swiss-Prot
Match: RIR2_BHV1C (Ribonucleoside-diphosphate reductase small chain OS=Bovine herpesvirus 1.1 (strain Cooper) GN=UL40 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.186e-14 Identity = 54/189 (28.57%), Postives = 89/189 (47.09%), Query Frame = 1 Query: 115 FPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLA--GRFMTEVQVAEARAFYGFQIAIENIHSEMYSLL-LETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGITFSNELISRDEGLH 672 + + P + + + A+ W E L+ D + L+ E F + AF +A+D +V NL T+ + +Y Q +IE +HS +YS + L + D+ + P V +K W + +E+ AE+ + +EGIFFS SF AI +L+ L +N+LISRDE +H Sbjct: 18 YETECPDLDHLRSLSVANRWLETEFPLADDAKDVARLSGAELEFYRFLFAFLSAADDLVNVNLGDLSELFTQKDILH---YYIEQESIEVVHSRVYSAIQLLLFRNDAVARAGYVEGALGDPAVRRKVDWLERRVAAAESVAEKYVLMILIEGIFFSSSFAAIAYLRTHNLFVVTCQTNDLISRDEAVH 203
BLAST of FC920661 vs. ExPASy Swiss-Prot
Match: RIR2_EHV1B (Ribonucleoside-diphosphate reductase small chain OS=Equine herpesvirus 1 (strain Ab4p) GN=20 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.023e-14 Identity = 54/182 (29.67%), Postives = 88/182 (48.35%), Query Frame = 1 Query: 130 PQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLL-LETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGITFSNELISRDEGLH 672 P I + + A+ W ++ +S DL+ LT E+ F + AF +A+D +V NL G + +Y Q +IE HS +YS + L + D+ + R +I + +K W + + AE+ I +EG+FF+ SF +I +L+ L SN+LISRDE +H Sbjct: 28 PDIEHLRSLSVANRWLDTDLPISDDLKDVAKLTPAEREFYRFLFAFLSAADDLVNLNL-GDLSALFTQKDILHYYIEQESIEVTHSRVYSAIQLMLFGNDAAARARYVASIIGDAAIGRKVAWLQAKVRECGSVAEKYILMILIEGLFFASSFASIAYLRTHNLFVVTCQSNDLISRDEAIH 208
BLAST of FC920661 vs. ExPASy Swiss-Prot
Match: RIR2_SUHVK (Ribonucleoside-diphosphate reductase small chain OS=Suid herpesvirus 1 (strain Kaplan) GN=RR2 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.311e-13 Identity = 52/186 (27.96%), Postives = 87/186 (46.77%), Query Frame = 1 Query: 124 QYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAG--RFMTEVQVAEARAFYGFQIAIENIHSEMYSLL-LETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGITFSNELISRDEGLH 672 Q P + + + A+ W ++ L D + AL+ E F + AF +A+D +V NL T+ + +Y Q IE +HS +YS + L + D+ + R A + +K W + + + AE+ + +EGIFF+ SF +I +L+ L SN+ ISRDE +H Sbjct: 8 QCPDMDHLRSLSVANRWLETDLPLGDDAKDVAALSEPELEFYRFLFAFLSAADDLVNVNLGSLSELFTQKDILH---YYIEQECIEVVHSRVYSAIQLMLFRGDAAARERYVRAALRDEAIRRKVEWLDSRVAECASVAEKYLLMILIEGIFFASSFASISYLRTHNLFVVTCQSNDFISRDEAIH 190
BLAST of FC920661 vs. ExPASy Swiss-Prot
Match: RIR2_EHV4 (Ribonucleoside-diphosphate reductase small chain OS=Equine herpesvirus 4 (strain 1942) PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.311e-13 Identity = 52/182 (28.57%), Postives = 88/182 (48.35%), Query Frame = 1 Query: 130 PQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLL-LETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGITFSNELISRDEGLH 672 P I + + A+ W ++ +S DL+ L E+ F + AF +A+D +V NL G + +Y Q +IE HS +YS + L + D+ + R ++ + K +W + ++ AE+ I +EG+FF+ SF +I +L+ L SN+LISRDE +H Sbjct: 27 PDIEHLRLLSVANRWLDTDLPISDDLKDVAKLAPAEREFYRFLFAFLSAADDLVNLNL-GDLSALFTQKDILHYYIEQESIEVTHSRVYSAIQLMLFGNDATARARYVASVVKDVAIDLKVSWLQAKVRECKSVAEKYILMILIEGVFFASSFASIAYLRTHNLFVVTCQSNDLISRDEAIH 207
BLAST of FC920661 vs. ExPASy Swiss-Prot
Match: RIR2_SHV21 (Ribonucleoside-diphosphate reductase small chain OS=Saimiriine herpesvirus 2 (strain 11) GN=60 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.507e-13 Identity = 48/178 (26.97%), Postives = 88/178 (49.44%), Query Frame = 1 Query: 142 EMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHA-IETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGITFSNELISRDEGLH 672 E+ K+ + W +V L D+ + L + F + F ++ +V N+ +++ + +Y Q+A+ENIH ++Y+ +L K++ + + I + +K W + + AE+++ F VEGIFF SF +I + RG+M GI +N+ I+RDE LH Sbjct: 18 ELTKETWKNRWFPSQVPLQGDVCCVDMLNERDLEFYKFLFTFLGMAEKLVNINIED-LLSQFDSHDISHYYAEQMAMENIHGKVYANILNMLFKNNITEVYSYACDIMNDSALQEKLRWLNGRVTEASDKAEKILLFLLVEGIFFISSFFSIGLFRVRGIMNGICLANDYIARDEMLH 194
BLAST of FC920661 vs. ExPASy Swiss-Prot
Match: RIR2_TREPA (Ribonucleoside-diphosphate reductase subunit beta OS=Treponema pallidum GN=nrdB PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.472e-12 Identity = 51/191 (26.70%), Postives = 89/191 (46.60%), Query Frame = 1 Query: 121 IQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENL--AGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKK---ATWALNWIDGSETFAERLIAFA--CVEGIFFSGSFCAIFWLKKRGLMPGITFSNELISRDEGLH 672 ++YP + + Y++A +FW EE+++S D++ + L+A EK +L+F D I NL G+++T ++ FQ E +HS+ YS +L+T + + L+ + +A+ + D A +A A +EGI+F F + L + MPG I+RDE H Sbjct: 41 MKYPWVSKWYRQAMNNFWIPEEINMSSDVQDYRNLSAIEKTAYDKILSFLIFLDSIQTANLPNIGQYITANEINLCLTIQAFQ---EAVHSQSYSYMLDTICSPEERNDILYQWKDDEHLLARNKFIGNLYNEFQDDKSVLALLKVAIANYVLEGIYFYSGFMFFYNLGRNNKMPGSVQEIRYINRDENTH 228
BLAST of FC920661 vs. ExPASy Swiss-Prot
Match: RIR2_CHLTR (Ribonucleoside-diphosphate reductase subunit beta OS=Chlamydia trachomatis GN=nrdB PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.395e-12 Identity = 50/203 (24.63%), Postives = 90/203 (44.33%), Query Frame = 1 Query: 112 MFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA--LTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWAL-------------NWIDGSETFAERLIAFACV-EGIFFSGSFCAIFWLKKRGLMPGITFSNELISRDEGLH 672 + PI+Y WE Y A+ W E+ + +D+ W++ L+ DE+ + L FF+ ++ +V N+ V EAR + Q E +H+ + + E+ D E +F+A + K + + + ++G + F + L+ + + EGIFF F I ++ M GI + I RDE +H Sbjct: 31 LVPIKYKWAWEHYLNGCANNWLPTEIPMGKDIELWKSDRLSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHVTNPEARQYLLRQAFEEAVHTHTFLYICESLGLDEKE---IFNAYNERAAIKAKDDFQMEITGKVLDPNFRTDSVEGLQEFVKNLVGYYIIMEGIFFYSGFVMILSFHRQNKMIGIGEQYQYILRDETIH 230
BLAST of FC920661 vs. ExPASy Swiss-Prot
Match: RIR2_CHLMU (Ribonucleoside-diphosphate reductase subunit beta OS=Chlamydia muridarum GN=nrdB PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.395e-12 Identity = 50/203 (24.63%), Postives = 90/203 (44.33%), Query Frame = 1 Query: 112 MFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA--LTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWAL-------------NWIDGSETFAERLIAFACV-EGIFFSGSFCAIFWLKKRGLMPGITFSNELISRDEGLH 672 + PI+Y WE Y A+ W E+ + +D+ W++ L+ DE+ + L FF+ ++ +V N+ V EAR + Q E +H+ + + E+ D E +F+A + K + + + ++G + F + L+ + + EGIFF F I ++ M GI + I RDE +H Sbjct: 31 LVPIKYKWAWEHYLNGCANNWLPTEISMGKDIELWKSNVLSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHVTNPEARQYLLRQAFEEAVHTHTFLYICESLGLDEKE---IFNAYNERASIKAKDDFQMEITGKVLDPNFRTDSVEGLQEFIKNLVGYYIIMEGIFFYSGFVMILSFHRQNKMVGIGEQYQYILRDETIH 230
BLAST of FC920661 vs. ExPASy Swiss-Prot
Match: RIR2_CHLPN (Ribonucleoside-diphosphate reductase subunit beta OS=Chlamydia pneumoniae GN=nrdB PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.090e-11 Identity = 50/203 (24.63%), Postives = 89/203 (43.84%), Query Frame = 1 Query: 112 MFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA--LTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKK-------------ATWALNWIDGSETFAERLIAFACV-EGIFFSGSFCAIFWLKKRGLMPGITFSNELISRDEGLH 672 + PI+Y WE Y A+ W EV +++D+ W++ L+ DE+ + L FF+ ++ +V N+ + EAR + Q E +H+ + + E+ D E +F+A + K +++ +G F + L+ + + EGIFF F I ++ M GI + I RDE +H Sbjct: 31 LVPIKYKWAWEHYLNGCANNWLPTEVPMARDIELWKSDELSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHITNPEARQYLLRQAFEEAVHTHTFLYICESLGLDEGE---VFNAYNERASIRAKDDFQMTLTVDVLDPNFSVQSSEGLGQFIKNLVGYYIIMEGIFFYSGFVMILSFHRQNKMTGIGEQYQYILRDETIH 230 The following BLAST results are available for this feature:
BLAST of FC920661 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920661 ID=FC920661; Name=FC920661; organism=Citrus clementina; type=EST; length=679bpback to top |