FC920663

Overview
NameFC920663
Unique NameFC920663
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length719
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920663 vs. ExPASy Swiss-Prot
Match: TSAA_HELPJ (Probable peroxiredoxin OS=Helicobacter pylori J99 GN=tsaA PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.541e-28
Identity = 66/131 (50.38%), Postives = 85/131 (64.89%), Query Frame = 2
Query:  308 LVGNTAPDFAAEAVFDQEFIN--VKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDK 694
            LV   APDF A AV     ++   +LS  +GK  VILFF+P DFTFVCPTEI AF  R  +F +    ++GVS DS   H AW  T  + GG+G + +P++ADITKSIS+ Y VL  ++ IALRG F+IDK
Sbjct:    2 LVTKLAPDFKAPAVLGNNEVDEHFELSKNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSISRDYDVLF-EEAIALRGAFLIDK 131          
BLAST of FC920663 vs. ExPASy Swiss-Prot
Match: TSA1_CANAL (Peroxiredoxin TSA1 OS=Candida albicans GN=TSA1 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.039e-28
Identity = 61/129 (47.29%), Postives = 86/129 (66.67%), Query Frame = 2
Query:  305 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIID 691
            P+V   AP F   AV D  F  V L  Y GK +V+L F PL FTFVCP+EI A+S+   +F + + ++L  STDS ++ LAW    RK GG+G + +P++AD   S+S+ YGVLI ++G+ALRG+F+ID
Sbjct:    3 PVVQQPAPSFKKTAVVDGVFEEVTLEQYKGK-WVLLAFIPLAFTFVCPSEIIAYSEAVKKFAEKDAQVLFASTDSEYTWLAWTNVARKDGGIGKVDFPVLADTNHSLSRDYGVLIEEEGVALRGIFLID 130          
BLAST of FC920663 vs. ExPASy Swiss-Prot
Match: TSAA_HELPY (Probable peroxiredoxin OS=Helicobacter pylori GN=tsaA PE=1 SV=3)

HSP 1 Score: 124.02 bits (310), Expect = 7.888e-28
Identity = 65/131 (49.62%), Postives = 85/131 (64.89%), Query Frame = 2
Query:  308 LVGNTAPDFAAEAVFDQEFIN--VKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDK 694
            LV   APDF A AV     ++   +LS  +GK   ILFF+P DFTFVCPTEI AF  R  +F++    ++GVS DS   H AW  T  + GG+G + +P++ADITKSIS+ Y VL  ++ IALRG F+IDK
Sbjct:    2 LVTKLAPDFKAPAVLGNNEVDEHFELSKNLGKNGAILFFWPKDFTFVCPTEIIAFDKRVKDFQEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVTFPMVADITKSISRDYDVLF-EEAIALRGAFLIDK 131          
BLAST of FC920663 vs. ExPASy Swiss-Prot
Match: TSAA_BUCAI (Probable peroxiredoxin OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=BU182 PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.113e-27
Identity = 59/130 (45.38%), Postives = 84/130 (64.62%), Query Frame = 2
Query:  308 LVGNTAPDFAAEAVFDQEFI--NVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIID 691
            LV   AP+F A A+     I     L  Y   +  +LFF+P+DFTFVCP+EI  F+  ++EF+K N +I+GVS DSV+ H AW  T  K+GG+G + +P+++D+   I KSYG+  P+ GIALR  F+ID
Sbjct:    3 LVTQNAPNFIAPAILKNNQIVEQFDLKKYSNGQSTVLFFWPMDFTFVCPSEIIEFNKLHSEFKKRNVKIVGVSIDSVYVHQAWQNTLPKNGGIGKINFPMVSDVKHDIQKSYGIQHPNLGIALRASFLID 132          
BLAST of FC920663 vs. ExPASy Swiss-Prot
Match: CR29_ENTHI (Putative peroxiredoxin OS=Entamoeba histolytica PE=1 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 8.721e-27
Identity = 59/128 (46.09%), Postives = 86/128 (67.19%), Query Frame = 2
Query:  311 VGNTAPDFAAEAVFDQEFIN-VKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIID 691
            +G  AP+F A A      I  + +++Y GK YV+L FYPLD+TFVCPTE+  +S+   + +++N E++GVS DSV+ H AW + D+  GG+G L +PL++DI + IS  YG+L  + GIA RG  IID
Sbjct:   43 IGKEAPEFKAPAYCPCGSIKEIDINEYRGK-YVVLLFYPLDWTFVCPTEMIGYSELAGQLKEINCEVIGVSVDSVYCHQAWCEADKSKGGVGKLTFPLVSDIKRCISIKYGMLNVEAGIARRGYVIID 169          
BLAST of FC920663 vs. ExPASy Swiss-Prot
Match: TSAA_BUCAP (Probable peroxiredoxin OS=Buchnera aphidicola subsp. Schizaphis graminum GN=BUsg_176 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.943e-26
Identity = 60/131 (45.80%), Postives = 83/131 (63.36%), Query Frame = 2
Query:  308 LVGNTAPDFAAEAVFDQEFI--NVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDK 694
            LV   AP+F A A+     I  N  L  Y   +  +LFF+P+DFTFVCP+EI  F+  +  FEK N +I+GVS DSVF H AW  T  ++GG+G +K+P+++DI   I KSY +  P+  IALR  F+ID+
Sbjct:    3 LVTQKAPNFIAPAILKNGKIMNNFDLKKYSNGQITVLFFWPMDFTFVCPSEIIEFNKTFEAFEKRNVKIVGVSIDSVFVHQAWQNTFPENGGIGKIKFPMVSDIKHEIQKSYHIEHPELNIALRASFLIDE 133          
BLAST of FC920663 vs. ExPASy Swiss-Prot
Match: TDXH_THEVO (Probable peroxiredoxin OS=Thermoplasma volcanium GN=TV1123 PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.375e-24
Identity = 56/134 (41.79%), Postives = 88/134 (65.67%), Query Frame = 2
Query:  299 IPPLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEE 700
            +P ++G  APDF            + LS+Y GK +V+LF +P DFT VC TE  AF++RY +F+KL  E++G+S DSVFSH+AW++  ++  G+ D+ +P+IADI K +++ Y ++    G  +RG+FIID  +
Sbjct:    1 MPVVLGQKAPDFTVNTSKGP----ITLSNYRGK-WVLLFSHPGDFTPVCTTEFIAFTERYEDFQKLGVELIGLSIDSVFSHIAWIRDIKEHFGI-DIPFPIIADIDKEVAREYNLIDEKSGATVRGVFIIDPNQ 128          
BLAST of FC920663 vs. ExPASy Swiss-Prot
Match: TSAA_BUCBP (Probable peroxiredoxin OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=bbp_171 PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.291e-24
Identity = 54/131 (41.22%), Postives = 82/131 (62.60%), Query Frame = 2
Query:  308 LVGNTAPDFAAEAVFDQEFI--NVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDK 694
            LV   APDF A A+     I  N    ++   +  ILFF+P+DFTFVCP+EI AF+   ++F+K N +++GVS DSV+ H AW  T   +G +  + + +++D+ + I +SYG+  P  G+ALR  F+IDK
Sbjct:    3 LVTYPAPDFTASAISCNGDIINNFNFKEFTNNQTSILFFWPMDFTFVCPSEIIAFNQELSKFKKRNVKLIGVSIDSVYVHHAWRNTLSHNGQIDKINFTMVSDLKREIQRSYGIEHPQLGVALRATFLIDK 133          
BLAST of FC920663 vs. ExPASy Swiss-Prot
Match: PRXU_EUBAC (Selenocysteine-containing peroxiredoxin prxU OS=Eubacterium acidaminophilum GN=prxU PE=1 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 1.539e-23
Identity = 54/129 (41.86%), Postives = 79/129 (61.24%), Query Frame = 2
Query:  311 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKE 697
            VG  APDF     +  EF   +LS+Y+GK +V+L FYP DFTFV  TE++A +++Y EF+KL  E+L VS DSVF H  W   +      G + +P+++D   ++   YGV  P+ G+  RG F+ID +
Sbjct:    4 VGKKAPDFEMAGFYKGEFKTFRLSEYLGK-WVVLCFYPGDFTFVUATEVSAVAEKYPEFQKLGVEVLSVSVDSVFVHKMWNDNELSKMVEGGIPFPMLSDGGGNVGTLYGVYDPEAGVENRGRFLIDPD 131          
BLAST of FC920663 vs. ExPASy Swiss-Prot
Match: TDXH2_THEAC (Probable peroxiredoxin 2 OS=Thermoplasma acidophilum GN=Ta0954 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.903e-22
Identity = 54/130 (41.54%), Postives = 83/130 (63.85%), Query Frame = 2
Query:  311 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEE 700
            +G  APDF            V LS Y GK +V+LF +P DFT VC TE  AF++RY +F+ L  E+LG+S DSV+SH+AW++  ++  G+ ++ +P+IADI K +++ Y ++    G  +RG+FIID  +
Sbjct:    1 MGQKAPDFTVNTSKGP----VTLSSYRGK-WVLLFSHPGDFTPVCTTEFIAFTERYKDFQALGVELLGLSIDSVYSHIAWIRDIKEHFGI-EIPFPIIADIDKEVARQYNLIDEKSGATVRGVFIIDPNQ 124          
The following BLAST results are available for this feature:
BLAST of FC920663 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
TSAA_HELPJ3.541e-2850.38Probable peroxiredoxin OS=Helicobacter pylori J99 ... [more]
TSA1_CANAL6.039e-2847.29Peroxiredoxin TSA1 OS=Candida albicans GN=TSA1 PE=... [more]
TSAA_HELPY7.888e-2849.62Probable peroxiredoxin OS=Helicobacter pylori GN=t... [more]
TSAA_BUCAI5.113e-2745.38Probable peroxiredoxin OS=Buchnera aphidicola subs... [more]
CR29_ENTHI8.721e-2746.09Putative peroxiredoxin OS=Entamoeba histolytica PE... [more]
TSAA_BUCAP1.943e-2645.80Probable peroxiredoxin OS=Buchnera aphidicola subs... [more]
TDXH_THEVO2.375e-2441.79Probable peroxiredoxin OS=Thermoplasma volcanium G... [more]
TSAA_BUCBP5.291e-2441.22Probable peroxiredoxin OS=Buchnera aphidicola subs... [more]
PRXU_EUBAC1.539e-2341.86Selenocysteine-containing peroxiredoxin prxU OS=Eu... [more]
TDXH2_THEAC2.903e-2241.54Probable peroxiredoxin 2 OS=Thermoplasma acidophil... [more]

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Properties
Property NameValue
Genbank descriptionC32011D09EF RVDevelop1 Citrus clementina cDNA clone C32011D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920663 ID=FC920663; Name=FC920663; organism=Citrus clementina; type=EST; length=719bp
GGCAACAGATAGCCACACTTTGCTTTTCCCCGTTCGTTGACTCCAGCTGA
ACAATAATACAACAACAAAAACAATGGCTTGCTCAGCTGCTTCTGCTGCT
GCCACGGCAACAGCCGCTCTCATTTCCTCTAACCCCAAGGCTTTCTCTTC
TTCCTCAATCTCCCCTTCTCAAAACCTAACCATTCCCCGCTCCTTCTCCG
GCCTCCGCAATCCCCTCCAGTCCCAGGTCCCCCGCCCCGTTTCTCTTTCC
CGCGGGTCCCGTTCTCGCAAGTCCTTCGTTGTCAAAGCATCCGTTGAAAT
ACCACCATTGGTGGGCAACACGGCACCTGATTTTGCTGCAGAGGCTGTTT
TCGATCAAGAGTTCATCAATGTCAAGCTTTCGGATTACATTGGGAAGAAA
TATGTGATTCTCTTTTTCTACCCGTTGGACTTCACATTTGTTTGCCCCAC
AGAAATCACTGCTTTCAGCGACCGATATACTGAATTTGAGAAGCTAAACA
CAGAGATATTGGGTGTCTCAACCGACAGTGTGTTTTCACACTTGGCATGG
GTCCAAACAGACAGAAAGTCAGGTGGTCTTGGTGATTTGAAGTACCCACT
AATTGCTGATATCACCAAATCAATTTCAAAATCCTATGGTGTTCTGATCC
CTGATCAGGGAATTGCATTGAGAGGACTCTTTATTATTGACAAAGAGGAG
TCATCCAGCACTCAACCAT
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