FC920666
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODC_PRIGL (Superoxide dismutase [Cu-Zn] OS=Prionace glauca GN=sod1 PE=1 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.054e-37 Identity = 71/122 (58.20%), Postives = 82/122 (67.21%), Query Frame = 3 Query: 324 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 LKGT V G V Q GP T+ +TGLTPG HGFH+H +GD TNGCIS G H+NP + HG P DE RH GDLGN+ AN NGVAE I D Q+ L G +++GR VVHE EDDLGK G Sbjct: 7 LKGTGEVTGTVLFEQAADGPVTLKGSITGLTPGKHGFHVHAFGDNTNGCISAGPHYNPFSKNHGGPDDEERHVGDLGNVEANGNGVAEFEIKDRQLHLSGERSIIGRTLVVHEKEDDLGKGG 128
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODC5_MAIZE (Superoxide dismutase [Cu-Zn] 4AP OS=Zea mays GN=SODCC.2 PE=2 SV=2) HSP 1 Score: 154.451 bits (389), Expect = 5.210e-37 Identity = 71/122 (58.20%), Postives = 87/122 (71.31%), Query Frame = 3 Query: 324 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 L + V+G + TQE GPT V V+GL PG HGFH+H GDTTNGC+STG H+NP + HGAP+DE RHAGDLGN+ A A+GVA + D+QI L GPN+++GRA VVH DDLGK G Sbjct: 8 LGSSDGVKGTIFFTQEGDGPTAVTGSVSGLKPGLHGFHVHALGDTTNGCMSTGPHYNPASKEHGAPEDENRHAGDLGNVTAGADGVANINVTDSQIPLTGPNSIIGRAVVVHADPDDLGKGG 129
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODC2_SOLLC (Superoxide dismutase [Cu-Zn] 2 OS=Solanum lycopersicum GN=SODCC.5 PE=3 SV=3) HSP 1 Score: 153.295 bits (386), Expect = 1.161e-36 Identity = 70/122 (57.38%), Postives = 83/122 (68.03%), Query Frame = 3 Query: 324 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 L + V G + TQ+ PTTVN ++GL PG HGFH+H GDTTNGC+STG H+NP HGAP+DEVRHAGDLGNI +G A TI D QI L GP +++GRA VVH DDLGK G Sbjct: 8 LNSSEGVSGTILFTQDGAAPTTVNGNISGLKPGLHGFHVHALGDTTNGCMSTGPHYNPAGKEHGAPEDEVRHAGDLGNITVGEDGTASFTITDKQIPLTGPQSIIGRAVVVHADPDDLGKGG 129
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODC1_ORYSJ (Superoxide dismutase [Cu-Zn] 1 OS=Oryza sativa subsp. japonica GN=SODCC1 PE=1 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.161e-36 Identity = 70/116 (60.34%), Postives = 84/116 (72.41%), Query Frame = 3 Query: 342 VEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 V+G + QE GPTTV V+GL PG HGFH+H GDTTNGC+STG H+NP HGAP+DE RHAGDLGN+ A +GVA +VD+QI L GPN+++GRA VVH DDLGK G Sbjct: 14 VKGTIHFVQEGDGPTTVTGSVSGLKPGLHGFHIHALGDTTNGCMSTGPHYNPAGKEHGAPEDETRHAGDLGNVTAGEDGVANIHVVDSQIPLTGPNSIIGRAVVVHADPDDLGKGG 129
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODC1_ORYSI (Superoxide dismutase [Cu-Zn] 1 OS=Oryza sativa subsp. indica GN=SODCC1 PE=2 SV=2) HSP 1 Score: 153.295 bits (386), Expect = 1.161e-36 Identity = 70/116 (60.34%), Postives = 84/116 (72.41%), Query Frame = 3 Query: 342 VEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 V+G + QE GPTTV V+GL PG HGFH+H GDTTNGC+STG H+NP HGAP+DE RHAGDLGN+ A +GVA +VD+QI L GPN+++GRA VVH DDLGK G Sbjct: 14 VKGTIHFVQEGDGPTTVTGSVSGLKPGLHGFHIHALGDTTNGCMSTGPHYNPAGKEHGAPEDETRHAGDLGNVTAGEDGVANIHVVDSQIPLTGPNSIIGRAVVVHADPDDLGKGG 129
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODC_PEA (Superoxide dismutase [Cu-Zn] OS=Pisum sativum GN=SODCC PE=2 SV=2) HSP 1 Score: 152.91 bits (385), Expect = 1.516e-36 Identity = 71/122 (58.20%), Postives = 82/122 (67.21%), Query Frame = 3 Query: 324 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 L ++ V G + +QE GPTTV + GL PG HGFH+H GDTTNGCISTG HFNPN HGAP+DE RHAGDLGNI +G TI DN I L G N+++GRA VVH DDLGK G Sbjct: 8 LSNSNEVSGTINFSQEGNGPTTVTGTLAGLKPGLHGFHIHALGDTTNGCISTGPHFNPNGKEHGAPEDETRHAGDLGNINVGDDGTVSFTITDNHIPLTGTNSIIGRAVVVHADPDDLGKGG 129
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODC_BRAOC (Superoxide dismutase [Cu-Zn] OS=Brassica oleracea var. capitata GN=SODCC PE=1 SV=2) HSP 1 Score: 151.369 bits (381), Expect = 4.411e-36 Identity = 71/122 (58.20%), Postives = 84/122 (68.85%), Query Frame = 3 Query: 324 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 L + V+G + T E G TTV V+GL PG HGFH+H GD TNGC+STG HFNP+ THGAP+D RHAGDLGNI+ +G A TI D+QI L GPN++VGRA VVH DDLGK G Sbjct: 8 LNSSEGVKGTIFFTHEGNGATTVTGTVSGLRPGLHGFHVHALGDNTNGCMSTGPHFNPDGKTHGAPEDANRHAGDLGNIIVGDDGTATFTITDSQIPLSGPNSIVGRAIVVHADPDDLGKGG 129
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODC_SCHMA (Superoxide dismutase [Cu-Zn] OS=Schistosoma mansoni GN=SOD PE=1 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.760e-36 Identity = 69/123 (56.10%), Postives = 87/123 (70.73%), Query Frame = 3 Query: 324 LKGTSNVEGVVTLTQE-DGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 + GT+ V+GVV TQE D GP V+ +GL G HGFH+HE+GDTTNGC S GAHFNP HGAP+D +RH GDLGN+VA A+G A D ISL+G ++++GR V+HE EDDLG+ G Sbjct: 7 MTGTAGVKGVVKFTQETDNGPVHVHAEFSGLKAGKHGFHVHEFGDTTNGCTSAGAHFNPTKQEHGAPEDSIRHVGDLGNVVAGADGNAVYNATDKLISLNGSHSIIGRTMVIHENEDDLGRGG 129
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODC_DANRE (Superoxide dismutase [Cu-Zn] OS=Danio rerio GN=sod1 PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 7.523e-36 Identity = 69/123 (56.10%), Postives = 86/123 (69.92%), Query Frame = 3 Query: 324 LKGTSNVEGVVTLTQE-DGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 LKGT V G V QE + P V +TGLTPG HGFH+H +GD TNGCIS G HFNP++ THG P D VRH GDLGN+ A+A+GVA+ I D ++L G ++++GR V+HE EDDLGK G Sbjct: 9 LKGTGEVTGTVYFNQEGEKKPVKVTGEITGLTPGKHGFHVHAFGDNTNGCISAGPHFNPHDKTHGGPTDSVRHVGDLGNVTADASGVAKIEIEDAMLTLSGQHSIIGRTMVIHEKEDDLGKGG 131
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODC_ARATH (Superoxide dismutase [Cu-Zn] OS=Arabidopsis thaliana GN=SODCC PE=1 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 7.523e-36 Identity = 73/122 (59.84%), Postives = 84/122 (68.85%), Query Frame = 3 Query: 324 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 L + V G + TQE G TTV+ V+GL PG HGFH+H GDTTNGC+STG HFNP+ THGAP+D RHAGDLGNI +G A TI D QI L GPN++VGRA VVH DDLGK G Sbjct: 8 LNSSEGVTGTIFFTQEGDGVTTVSGTVSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPDGKTHGAPEDANRHAGDLGNITVGDDGTATFTITDCQIPLTGPNSIVGRAVVVHADPDDLGKGG 129 The following BLAST results are available for this feature:
BLAST of FC920666 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 141
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920666 ID=FC920666; Name=FC920666; organism=Citrus clementina; type=EST; length=700bpback to top |