FC920666
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODC_ANACO (Superoxide dismutase [Cu-Zn] OS=Ananas comosus GN=SOD1 PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 7.523e-36 Identity = 69/122 (56.56%), Postives = 83/122 (68.03%), Query Frame = 3 Query: 324 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 L + V+G + TQE GPTTV ++GL PG HGFH+H GDTTNGC+STG HFNP HGAP+DE RHAGDLGN+ +G IVD+QI L G N+++GRA VVH DDLGK G Sbjct: 8 LGSSEGVKGTIYFTQEGDGPTTVTGSISGLKPGLHGFHVHALGDTTNGCMSTGPHFNPAGNEHGAPEDETRHAGDLGNVTVGEDGTVNVNIVDSQIPLSGSNSIIGRAVVVHADPDDLGKGG 129
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODC_CARCR (Superoxide dismutase [Cu-Zn] OS=Caretta caretta PE=1 SV=2) HSP 1 Score: 150.214 bits (378), Expect = 9.826e-36 Identity = 66/116 (56.90%), Postives = 82/116 (70.69%), Query Frame = 3 Query: 342 VEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 V+G++ Q+ GP T++ +TGLT G HGFH+HE+GD TNGC S GAHFNP HG P+D RH GDLGN++AN GVAE I D+ ISL G +++GR VVHE EDDLGK G Sbjct: 28 VKGIIYFEQQGNGPVTLSGSITGLTEGKHGFHVHEFGDNTNGCTSAGAHFNPPGKNHGGPQDNERHVGDLGNVIANKEGVAEVCIKDSLISLTGSQSIIGRTMVVHEKEDDLGKGG 143
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODC2_ORYSJ (Superoxide dismutase [Cu-Zn] 2 OS=Oryza sativa subsp. japonica GN=SODCC2 PE=1 SV=2) HSP 1 Score: 150.214 bits (378), Expect = 9.826e-36 Identity = 70/122 (57.38%), Postives = 86/122 (70.49%), Query Frame = 3 Query: 324 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 L + V+G + +QE GPT+V V+GL PG HGFH+H GDTTNGC+STG HFNP HGAP+DE RHAGDLGNI A A+GVA + D+QI L G ++++GRA VVH DDLGK G Sbjct: 8 LASSEGVKGTIFFSQEGDGPTSVTGSVSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPTGKEHGAPQDENRHAGDLGNITAGADGVANVNVSDSQIPLTGAHSIIGRAVVVHADPDDLGKGG 129
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODC2_MESCR (Superoxide dismutase [Cu-Zn] 2 OS=Mesembryanthemum crystallinum GN=SODCC.2 PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 9.826e-36 Identity = 70/122 (57.38%), Postives = 87/122 (71.31%), Query Frame = 3 Query: 324 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 + G +NV+G + Q+ G T V R+TGLTPG HGFH+H GDTTNGC STG HFNP HGAP D RHAGDLGN+VA A+GVAE ++ D QI L G ++++GRA VVH +DDLG+ G Sbjct: 10 INGNNNVKGSLQFIQDSTGVTHVKGRITGLTPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPFDTERHAGDLGNVVAGADGVAEVSVRDTQIPLSGQHSILGRAVVVHADQDDLGRTG 131
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODC2_MAIZE (Superoxide dismutase [Cu-Zn] 2 OS=Zea mays GN=SODCC.1 PE=2 SV=2) HSP 1 Score: 149.828 bits (377), Expect = 1.283e-35 Identity = 71/122 (58.20%), Postives = 87/122 (71.31%), Query Frame = 3 Query: 324 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 L GT +V+G + +QE GPTTV ++GL PG HGFH+H GDTTNGC+STG HFNP HGAP+DE RHAGDLGN+ A +GV I D+QI L GP++++GRA VVH DDLGK G Sbjct: 8 LAGT-DVKGTIFFSQEGDGPTTVTGSISGLKPGLHGFHVHALGDTTNGCMSTGPHFNPVGKEHGAPEDEDRHAGDLGNVTAGEDGVVNVNITDSQIPLAGPHSIIGRAVVVHADPDDLGKGG 128
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODC_NICPL (Superoxide dismutase [Cu-Zn] OS=Nicotiana plumbaginifolia GN=SODCC PE=2 SV=2) HSP 1 Score: 149.443 bits (376), Expect = 1.676e-35 Identity = 69/122 (56.56%), Postives = 82/122 (67.21%), Query Frame = 3 Query: 324 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 L + V G + TQ+ PTTV V+GL PG HGFH+H GDTTNGC+STG H+NP HGAP+DEVRHAGDLGNI +G A T+ D QI L GP +++GRA VVH DDLGK G Sbjct: 8 LSSSEGVSGTIFFTQDGDAPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTGPHYNPAGKEHGAPEDEVRHAGDLGNITVGEDGTASFTLTDKQIPLAGPQSIIGRAVVVHADPDDLGKGG 129
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODC_CARPA (Superoxide dismutase [Cu-Zn] OS=Carica papaya GN=SODCC PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.676e-35 Identity = 68/122 (55.74%), Postives = 84/122 (68.85%), Query Frame = 3 Query: 324 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 L + V G + TQ GPTTV ++GL PG HGFH+H GDTTNGC+STG HFNP HGAP+D++RHAGDLGN+ +G +I+D+QI L GPN++VGRA VVH DDLGK G Sbjct: 8 LSSSEGVSGTIFFTQAADGPTTVTGEISGLKPGHHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDIRHAGDLGNVNVGDDGKVSFSIIDSQIPLTGPNSIVGRAVVVHADPDDLGKGG 129
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODC_CAVPO (Superoxide dismutase [Cu-Zn] OS=Cavia porcellus GN=SOD1 PE=1 SV=3) HSP 1 Score: 149.058 bits (375), Expect = 2.189e-35 Identity = 67/122 (54.92%), Postives = 83/122 (68.03%), Query Frame = 3 Query: 324 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 LKG V+G++ Q+ GP V R+TGL G HGFH+HE+GD T GC S G HFNP + HG P+DE RH GDLGN+ A A+GVA +I D+ ISL G N+++GR VVHE DDLGK G Sbjct: 9 LKGDGPVQGIIHFEQKANGPVVVKGRITGLVEGKHGFHVHEFGDNTQGCTSAGPHFNPLSKKHGGPQDEERHVGDLGNVTAGADGVANVSIEDSLISLSGANSIIGRTMVVHEKPDDLGKGG 130
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODC1_SOLLC (Superoxide dismutase [Cu-Zn] 1 OS=Solanum lycopersicum GN=SODCC.1 PE=2 SV=2) HSP 1 Score: 149.058 bits (375), Expect = 2.189e-35 Identity = 70/122 (57.38%), Postives = 81/122 (66.39%), Query Frame = 3 Query: 324 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 L + V G TQ PTTVN ++GL PG HGFH+H GDTTNGC+STG H+NP HGAP+DEVRHAGDLGNI +G A TI D QI L GP +++GRA VVH DDLGK G Sbjct: 8 LNSSEGVSGTYLFTQVGVAPTTVNGNISGLKPGLHGFHVHALGDTTNGCMSTGPHYNPAGKEHGAPEDEVRHAGDLGNITVGEDGTASFTITDKQIPLTGPQSIIGRAVVVHADPDDLGKGG 129
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODE_BRUPA (Extracellular superoxide dismutase [Cu-Zn] OS=Brugia pahangi PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.859e-35 Identity = 67/115 (58.26%), Postives = 83/115 (72.17%), Query Frame = 3 Query: 339 NVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGK 683 N+ G + Q+D TT++ + GLTPG HGFH+H+YGDTTNGCIS G HFNP N THG P DE+RH GDLGNIVA A+G A I D + L GPN+++GR+ VVH +DDLGK Sbjct: 58 NINGTIHF-QQDKNSTTISGEIKGLTPGLHGFHVHQYGDTTNGCISAGPHFNPYNKTHGDPTDEMRHVGDLGNIVAGADGTAHIDISDKHVQLLGPNSIIGRSLVVHADQDDLGK 171 The following BLAST results are available for this feature:
BLAST of FC920666 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 141
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920666 ID=FC920666; Name=FC920666; organism=Citrus clementina; type=EST; length=700bpback to top |