FC920666
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODC_ONCVO (Superoxide dismutase [Cu-Zn] OS=Onchocerca volvulus GN=sod-1 PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 4.876e-35 Identity = 69/115 (60.00%), Postives = 83/115 (72.17%), Query Frame = 3 Query: 342 VEGVVTLTQE-DGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGK 683 V G++ Q+ +G PTTV V GLTPG HGFH+H+YGDTTNGCIS G HFNP N THG DE+RH GDLGNI A A+G A +I D I L GPN+++GR+ VVH +DDLGK Sbjct: 14 VSGIIRFKQDKEGLPTTVTGEVKGLTPGLHGFHIHQYGDTTNGCISAGPHFNPYNKTHGDRTDEIRHVGDLGNIEAGADGTAHISISDQHIQLLGPNSIIGRSIVVHADQDDLGK 128
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODC_IPOBA (Superoxide dismutase [Cu-Zn] OS=Ipomoea batatas GN=SODCC PE=2 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 4.876e-35 Identity = 71/122 (58.20%), Postives = 81/122 (66.39%), Query Frame = 3 Query: 324 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 L + V G + +QE GPTTV V+GL PG HGFH+H GDTTNGC+STG HFNP HGAP D+ RHAGDLGNI +G A TI D QI L G N+V+GRA VVH DDLGK G Sbjct: 8 LSSSEGVSGTIFFSQEGDGPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPGDDNRHAGDLGNITVGEDGTASFTITDKQIPLTGANSVIGRAVVVHGDPDDLGKGG 129
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODC_SOLCS (Superoxide dismutase [Cu-Zn] OS=Solidago canadensis var. scabra GN=SODCC PE=2 SV=3) HSP 1 Score: 146.747 bits (369), Expect = 1.086e-34 Identity = 69/123 (56.10%), Postives = 85/123 (69.11%), Query Frame = 3 Query: 324 LKGTSNVEGVVTLTQE-DGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 L + V G + +QE +G PTTV ++GL PGPHGFH+H GDTTNGC+STG H+NP+ HGAP DE RHAGDLGN+ +G A+ TIVD QI L G +++GRA VVH DDLGK G Sbjct: 8 LSSSEGVSGTIFFSQEAEGAPTTVTGDLSGLKPGPHGFHVHALGDTTNGCMSTGPHYNPHGKDHGAPDDEHRHAGDLGNVTVGEDGTAKFTIVDKQIPLIGAQSIIGRAVVVHADPDDLGKGG 130
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODC_ZANAE (Superoxide dismutase [Cu-Zn] OS=Zantedeschia aethiopica GN=SODCC PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.419e-34 Identity = 69/122 (56.56%), Postives = 82/122 (67.21%), Query Frame = 3 Query: 324 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 L G+ V+G V QE GPTT+ ++GL PG HGFH+H GDTTNGC+STG HFNP HGAP+D RHAGDLGN+ +G T+ D+QI L G N+VVGRA VVH DDLGK G Sbjct: 8 LTGSEGVQGTVFFAQEGEGPTTITGSLSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDGNRHAGDLGNVTVGEDGTVNFTVTDSQIPLTGLNSVVGRAVVVHADSDDLGKGG 129
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODC_HYLLA (Superoxide dismutase [Cu-Zn] OS=Hylobates lar GN=SOD1 PE=2 SV=3) HSP 1 Score: 146.362 bits (368), Expect = 1.419e-34 Identity = 68/123 (55.28%), Postives = 86/123 (69.92%), Query Frame = 3 Query: 324 LKGTSNVEGVVTLTQ-EDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 LKG S V+G++ Q E GP V R+TGLT G HGFH+H++GD T GC S G HFNP + HG PKDE RH GDLGN+ A+ +GVA+ +I D+ ISL G ++++GR VVHE DDLGK G Sbjct: 9 LKGDSPVQGIINFEQKESNGPVKVYGRITGLTEGLHGFHVHQFGDNTQGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVAKVSIEDSVISLSGDHSIIGRTLVVHEKADDLGKGG 131
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODC_HALRO (Superoxide dismutase [Cu-Zn] OS=Halocynthia roretzi PE=1 SV=2) HSP 1 Score: 145.206 bits (365), Expect = 3.161e-34 Identity = 66/117 (56.41%), Postives = 83/117 (70.94%), Query Frame = 3 Query: 339 NVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 +V+G + Q+ G TV V+GL PG HGFH+HEYGD TNGC S+G HFNP HGAP+D++RH GDLGNI A+++GVA I D ISL G ++++GRA VVH EDDLGK G Sbjct: 12 SVKGTLNFKQDAIGSCTVTGEVSGLIPGKHGFHIHEYGDLTNGCTSSGGHFNPFKQIHGAPEDDIRHVGDLGNITADSSGVATVNITDRMISLTGEHSIIGRAVVVHAGEDDLGKGG 128
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODC_CHICK (Superoxide dismutase [Cu-Zn] OS=Gallus gallus GN=SOD1 PE=1 SV=3) HSP 1 Score: 145.206 bits (365), Expect = 3.161e-34 Identity = 67/122 (54.92%), Postives = 82/122 (67.21%), Query Frame = 3 Query: 324 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 +KG + VEGV+ Q+ GP V ++TGL+ G HGFH+HE+GD TNGC S GAHFNP HG PKD RH GDLGN+ A GVAE I D+ ISL GP+ ++GR VVH DDLG+ G Sbjct: 10 MKGDAPVEGVIHFQQQGSGPVKVTGKITGLSDGDHGFHVHEFGDNTNGCTSAGAHFNPEGKQHGGPKDADRHVGDLGNVTAK-GGVAEVEIEDSVISLTGPHCIIGRTMVVHAKSDDLGRGG 130
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODC2_XENLA (Superoxide dismutase [Cu-Zn] B OS=Xenopus laevis GN=sod1-B PE=1 SV=3) HSP 1 Score: 144.821 bits (364), Expect = 4.128e-34 Identity = 68/122 (55.74%), Postives = 85/122 (69.67%), Query Frame = 3 Query: 324 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 L G+ +V+GVV Q+D G +V ++ GLT G HGFH+H +GD TNGC+S G+HFNP N HGAP D RH GDLGN+ A GVA+ I D+ ISL GPN+++GR VVHE DDLGK G Sbjct: 8 LAGSGDVKGVVHFEQQDEGAVSVEGKIEGLTDGLHGFHIHVFGDNTNGCMSAGSHFNPENKNHGAPGDTDRHVGDLGNVTAE-GGVAQFKITDSLISLKGPNSIIGRTAVVHEKADDLGKGG 128
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODC1_XENLA (Superoxide dismutase [Cu-Zn] A OS=Xenopus laevis GN=sod1-A PE=1 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 5.392e-34 Identity = 67/122 (54.92%), Postives = 83/122 (68.03%), Query Frame = 3 Query: 324 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 L G+ +V+GVV Q+D G TV ++ GLT G HGFH+H +GD TNGC+S G HFNP N HG+PKD RH GDLGN+ A GVA+ D QISL G +++GR VVHE +DDLGK G Sbjct: 8 LAGSGDVKGVVRFEQQDDGDVTVEGKIEGLTDGNHGFHIHVFGDNTNGCLSAGPHFNPQNKNHGSPKDADRHVGDLGNVTAE-GGVAQFKFTDPQISLKGERSIIGRTAVVHEKQDDLGKGG 128
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODC_CAPAN (Superoxide dismutase [Cu-Zn] OS=Capsicum annuum GN=SODCC PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 7.042e-34 Identity = 67/122 (54.92%), Postives = 80/122 (65.57%), Query Frame = 3 Query: 324 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 L + V G + +Q+ PTTV V+GL PG HGFH+H GDTTNGC+STG H+NP HGAP+DE RHAGDLGNI +G A TI D QI L GP +++GR VVH DDLGK G Sbjct: 8 LSSSECVSGTILFSQDGDAPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTGPHYNPAGKEHGAPEDENRHAGDLGNITVGEDGTASFTITDEQIPLTGPQSIIGRGVVVHADPDDLGKGG 129 The following BLAST results are available for this feature:
BLAST of FC920666 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 141
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920666 ID=FC920666; Name=FC920666; organism=Citrus clementina; type=EST; length=700bpback to top |