FC920666
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODC_MACFU (Superoxide dismutase [Cu-Zn] OS=Macaca fuscata fuscata GN=SOD1 PE=2 SV=3) HSP 1 Score: 140.198 bits (352), Expect = 1.017e-32 Identity = 66/123 (53.66%), Postives = 82/123 (66.67%), Query Frame = 3 Query: 324 LKGTSNVEGVVTLTQ-EDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 LKG S V+G + Q E GP V +TGLT G HGFH+H++GD T GC S G HFNP + HG PKDE RH GDLGN+ A +GVA+ + D+ ISL G ++++GR VVHE DDLGK G Sbjct: 9 LKGDSPVQGTINFEQKESNGPVKVWGSITGLTEGLHGFHVHQFGDNTQGCTSAGPHFNPLSRQHGGPKDEERHVGDLGNVTAGKDGVAKVSFEDSVISLSGDHSIIGRTLVVHEKADDLGKGG 131
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODC_MACFA (Superoxide dismutase [Cu-Zn] OS=Macaca fascicularis GN=SOD1 PE=2 SV=3) HSP 1 Score: 140.198 bits (352), Expect = 1.017e-32 Identity = 66/123 (53.66%), Postives = 82/123 (66.67%), Query Frame = 3 Query: 324 LKGTSNVEGVVTLTQ-EDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 LKG S V+G + Q E GP V +TGLT G HGFH+H++GD T GC S G HFNP + HG PKDE RH GDLGN+ A +GVA+ + D+ ISL G ++++GR VVHE DDLGK G Sbjct: 9 LKGDSPVQGTINFEQKESNGPVKVWGSITGLTEGLHGFHVHQFGDNTQGCTSAGPHFNPLSRQHGGPKDEERHVGDLGNVTAGKDGVAKVSFEDSVISLSGDHSIIGRTLVVHEKADDLGKGG 131
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODC_PANTR (Superoxide dismutase [Cu-Zn] OS=Pan troglodytes GN=SOD1 PE=2 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 1.734e-32 Identity = 66/123 (53.66%), Postives = 82/123 (66.67%), Query Frame = 3 Query: 324 LKGTSNVEGVVTLTQ-EDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 LKG V+G++ Q E GP V + GLT G HGFH+HE+GD T GC S G HFNP + HG PKDE RH GDLGN+ A+ +GVA+ +I D+ ISL G + ++GR VVHE DDLGK G Sbjct: 9 LKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGG 131
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODC_HUMAN (Superoxide dismutase [Cu-Zn] OS=Homo sapiens GN=SOD1 PE=1 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 1.734e-32 Identity = 66/123 (53.66%), Postives = 82/123 (66.67%), Query Frame = 3 Query: 324 LKGTSNVEGVVTLTQ-EDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 LKG V+G++ Q E GP V + GLT G HGFH+HE+GD T GC S G HFNP + HG PKDE RH GDLGN+ A+ +GVA+ +I D+ ISL G + ++GR VVHE DDLGK G Sbjct: 9 LKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGG 131
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODC_CANGA (Superoxide dismutase [Cu-Zn] OS=Candida glabrata GN=SOD1 PE=3 SV=3) HSP 1 Score: 139.043 bits (349), Expect = 2.265e-32 Identity = 68/124 (54.84%), Postives = 84/124 (67.74%), Query Frame = 3 Query: 324 LKGTSNVEGVVTLTQ-EDGGPTTVNVRVTGLTPGPH-GFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 L+G++ V GVVTL Q + PTT+ + G P GFH+HE+GD TNGC+S G HFNP THGAP+DE RH GDLGNI +A GVA+ I D+ + L GP +VVGR+ VVH DDLGK G Sbjct: 8 LRGSAGVSGVVTLEQASEQDPTTITYEIAGNDPNAERGFHIHEFGDVTNGCVSAGPHFNPFKKTHGAPQDENRHVGDLGNIKTDAQGVAKGVITDSLVKLIGPTSVVGRSVVVHAGTDDLGKGG 131
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODC_CEREL (Superoxide dismutase [Cu-Zn] OS=Cervus elaphus GN=SOD1 PE=2 SV=3) HSP 1 Score: 137.887 bits (346), Expect = 5.046e-32 Identity = 64/122 (52.46%), Postives = 81/122 (66.39%), Query Frame = 3 Query: 324 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 LKG V+G + + G V +TGLT G HGFH+H++GD T GC S G HFNP + HG PKDE RH GDLGN+ A+ NGVA+ IVD+ ISL G ++++GR VVHE DDLG+ G Sbjct: 9 LKGDGPVQGTIRF-EAKGHTVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVTADKNGVAKVDIVDSLISLSGEHSIIGRTMVVHEKPDDLGRGG 129
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODC_CANFA (Superoxide dismutase [Cu-Zn] OS=Canis familiaris GN=SOD1 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.591e-32 Identity = 62/120 (51.67%), Postives = 79/120 (65.83%), Query Frame = 3 Query: 324 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGK 683 LKG VEG + Q+ GP V+ +TGLT G HGFH+H++ D T GC S G HFNP + HG PKD+ RH GDLGN+ A +GVA +I D+ I+L G +++GR VVHE DDLGK Sbjct: 9 LKGQGPVEGTIHFVQKGSGPVVVSGTITGLTEGEHGFHVHQFEDXTQGCTSAGPHFNPLSKKHGGPKDQERHVGDLGNVTAGKDGVAIVSIEDSLIALSGDYSIIGRTMVVHEKRDDLGK 128
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODC_CAEBR (Superoxide dismutase [Cu-Zn] OS=Caenorhabditis briggsae GN=sod-1 PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.591e-32 Identity = 62/115 (53.91%), Postives = 79/115 (68.70%), Query Frame = 3 Query: 342 VEGVVTLTQE-DGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGK 683 V G + +TQ + P + + GLTPG HGFH+H+YGD+TNGC+S G HFNP THG P E RH GDLGN+ A A+GVA+ I D I+L G NTV+GR+ VVH +DDLG+ Sbjct: 36 VSGTIWITQNSESDPAVIEGEIKGLTPGLHGFHVHQYGDSTNGCLSAGPHFNPFGKTHGGPNSETRHVGDLGNVEAGADGVAKVHITDKLITLYGANTVIGRSMVVHAGQDDLGQ 150
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODC_ASHGO (Superoxide dismutase [Cu-Zn] OS=Ashbya gossypii GN=SOD1 PE=3 SV=3) HSP 1 Score: 137.117 bits (344), Expect = 8.608e-32 Identity = 65/124 (52.42%), Postives = 86/124 (69.35%), Query Frame = 3 Query: 324 LKGTSNVEGVVTLTQE-DGGPTTVNVRVTGLTPGP-HGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 LKG + V GVV QE D TT++ +TG P HGFH+HE+GD TNGC S+G+HFNP THG+P+DE RH GD+GN++A+ANGVA + D I + GP +++GR VVH +DDLG+ G Sbjct: 8 LKGDAGVSGVVHFEQEADAAVTTISWNITGFEPNTEHGFHIHEFGDVTNGCTSSGSHFNPFKKTHGSPEDENRHVGDMGNVLADANGVAVGSAKDPLIKIFGPTSILGRTVVVHAGKDDLGRGG 131
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODC_YEAST (Superoxide dismutase [Cu-Zn] OS=Saccharomyces cerevisiae GN=SOD1 PE=1 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 1.124e-31 Identity = 65/122 (53.28%), Postives = 83/122 (68.03%), Query Frame = 3 Query: 324 LKGTSNVEGVVTLTQ-EDGGPTTVNVRVTGLTPGPH-GFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGK 683 LKG + V GVV Q + PTTV+ + G +P GFH+HE+GD TNGC+S G HFNP THGAP DEVRH GD+GN+ + NGVA+ + D+ I L GP +VVGR+ V+H +DDLGK Sbjct: 8 LKGDAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHIHEFGDATNGCVSAGPHFNPFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGSFKDSLIKLIGPTSVVGRSVVIHAGQDDLGK 129 The following BLAST results are available for this feature:
BLAST of FC920666 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 141
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920666 ID=FC920666; Name=FC920666; organism=Citrus clementina; type=EST; length=700bpback to top |