FC920666
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODC4_DICDI (Superoxide dismutase [Cu-Zn] 4 OS=Dictyostelium discoideum GN=sodD PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 8.908e-29 Identity = 61/118 (51.69%), Postives = 81/118 (68.64%), Query Frame = 3 Query: 342 VEGVVTLTQE-DGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVA-NANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 V G + +QE +G P VN ++GL+ G HGFH+HE+GDT+NGC+S GAHFNP ++ HG P +RH GDLGNI + ++ VA I DN ISL G +++GR VVHE +DDLG G Sbjct: 13 VNGTIIFSQENEGSPVYVNGTISGLSGGLHGFHIHEFGDTSNGCLSAGAHFNPFHVEHGGPNSAIRHVGDLGNITSCPSSKVANVLIQDNVISLFGDLSIIGRTLVVHENQDDLGLGG 130
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODC_PIG (Superoxide dismutase [Cu-Zn] OS=Sus scrofa GN=SOD1 PE=1 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 1.519e-28 Identity = 57/122 (46.72%), Postives = 75/122 (61.48%), Query Frame = 3 Query: 324 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 LKG V+G + + V + GL G HGFH+H++GD T GC S G HFNP + HG PKD+ RH GDLGN+ A +GVA I D+ I+L G ++++GR VVHE DDLG+ G Sbjct: 9 LKGDGPVQGTIYFELKGEKTVLVTGTIKGLAEGDHGFHVHQFGDNTQGCTSAGPHFNPESKKHGGPKDQERHVGDLGNVTAGKDGVATVYIEDSVIALSGDHSIIGRTMVVHEKPDDLGRGG 130
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODC_KLULA (Superoxide dismutase [Cu-Zn] OS=Kluyveromyces lactis GN=SOD1 PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.519e-28 Identity = 62/124 (50.00%), Postives = 80/124 (64.52%), Query Frame = 3 Query: 324 LKGTSNVEGVVTLTQE-DGGPTTVNVRVTGLTPGP-HGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 LKG S+V G+V QE + T ++ +TG GFH+H +GD TNGC S G HFNP N HGAP+DE RH GDLGNI +A G+++ ++ D I L GP ++VGR VVH +DDLGK G Sbjct: 8 LKGDSSVSGIVRFEQESEDQQTKISWEITGNDANALRGFHIHTFGDNTNGCTSAGPHFNPFNKNHGAPEDEERHVGDLGNIPTDAQGISKGSLTDKHIKLLGPLSIVGRTVVVHAGQDDLGKGG 131
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODC_DROBS (Superoxide dismutase [Cu-Zn] (Fragment) OS=Drosophila busckii GN=Sod PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.984e-28 Identity = 62/118 (52.54%), Postives = 75/118 (63.56%), Query Frame = 3 Query: 339 NVEGVVTLTQE-DGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 + +G V QE + P V VTGL G HGFH+HE+GD TNGC+S+G HFNP HGAP DE RH GDLGNI A +G I D +I+L G N+++GR VVH DDLGK G Sbjct: 4 DAKGTVFFEQESEKCPVKVTGEVTGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPQGKEHGAPTDENRHLGDLGNITATGDGPTAVDICDCKITLFGANSIIGRTVVVHADPDDLGKGG 121
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODC_CERCA (Superoxide dismutase [Cu-Zn] OS=Ceratitis capitata GN=Sod PE=3 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 3.385e-28 Identity = 62/118 (52.54%), Postives = 74/118 (62.71%), Query Frame = 3 Query: 339 NVEGVVTLTQEDG-GPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 +V+G V Q+D P V V GL G HGFH+HE+GD TNGC S G HFNP +HGAP D RH GDLGNI A+ +G + I D I+L G N++VGR VVH DDLGK G Sbjct: 12 DVKGTVHFEQQDAKSPVLVTGEVNGLAKGLHGFHVHEFGDNTNGCTSAGPHFNPYGNSHGAPSDLNRHLGDLGNIEASGDGATKVEISDKLITLFGENSIVGRTIVVHADPDDLGKGG 129
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODE_DIRIM (Extracellular superoxide dismutase [Cu-Zn] OS=Dirofilaria immitis PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.541e-28 Identity = 57/118 (48.31%), Postives = 74/118 (62.71%), Query Frame = 3 Query: 333 TSNVEGVVTLTQED-GGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGK 683 + V G++ Q + TT+ + GLTPG HGFH+H+YG NGC S AH+NP THG P + ++H GDL NI A A+GVA I+ N I L GP +V+GR+ VVH DDLGK Sbjct: 48 SDTVNGIIYFQQNNRASATTIYGTINGLTPGLHGFHIHQYGIKANGCTSAAAHYNPFEKTHGRPTNNIKHIGDLRNIKAGADGVANVNIISNHIQLSGPLSVIGRSLVVHANPDDLGK 165
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODC_ASPJA (Superoxide dismutase [Cu-Zn] (Fragment) OS=Aspergillus japonicus GN=sodC PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.541e-28 Identity = 56/88 (63.64%), Postives = 66/88 (75.00%), Query Frame = 3 Query: 426 HGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 HGFH+H GDTTNGC+STG HFNP HGAP+DE RHAGDLGNI A A+GVA + D+QI L G ++++GRA VVH DDLGK G Sbjct: 8 HGFHVHALGDTTNGCMSTGPHFNPTGKEHGAPQDENRHAGDLGNITAGADGVANVNVSDSQIPLTGAHSIIGRAVVVHADPDDLGKGG 95
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODC_DROPS (Superoxide dismutase [Cu-Zn] OS=Drosophila pseudoobscura pseudoobscura GN=Sod PE=3 SV=3) HSP 1 Score: 123.635 bits (309), Expect = 9.848e-28 Identity = 60/118 (50.85%), Postives = 75/118 (63.56%), Query Frame = 3 Query: 339 NVEGVVTLTQEDG-GPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 + +G V QE P V V GL G HGFH+HE+GD TNGC+S+G HFNP N HGAP DE RH GDLGNI A + +I D++I+L G ++++GR VVH DDLGK G Sbjct: 11 DAKGTVFFEQETSEAPVKVTGEVLGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPRNKEHGAPTDENRHLGDLGNIQAAGDSPTAVSITDSKITLFGADSIIGRTVVVHADADDLGKGG 128
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODC_CLAPU (Superoxide dismutase [Cu-Zn] OS=Claviceps purpurea GN=SOD1 PE=3 SV=3) HSP 1 Score: 123.635 bits (309), Expect = 9.848e-28 Identity = 58/122 (47.54%), Postives = 76/122 (62.30%), Query Frame = 3 Query: 324 LKGTSNVEGVVTLTQE-DGGPTTVNVRVTGLTPGP-HGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGK 683 L+G + V G V QE + PTT+ +TG GFH+H +GD TNGC S G HFNP+ THGAP DE RH GDLGN+ + G A+ ++ D + L GP++V+GR V+H DDLGK Sbjct: 8 LRGDAKVGGTVVFEQESESAPTTITWDITGNDANAKRGFHIHTFGDNTNGCTSAGPHFNPHGKTHGAPTDEARHVGDLGNLETDGQGNAKGSVKDEHVKLIGPHSVIGRTVVIHAGTDDLGK 129
BLAST of FC920666 vs. ExPASy Swiss-Prot
Match: SODC_HUMLT (Superoxide dismutase [Cu-Zn] OS=Humicola lutea PE=1 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 1.680e-27 Identity = 60/124 (48.39%), Postives = 77/124 (62.10%), Query Frame = 3 Query: 324 LKGTSNVEGVVTLTQ-EDGGPTTVNVRVTGLTPGPH-GFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVG 689 L+G S + G VT Q + PTTV+ +TG P G H+H++GD TNGC S G H+NP THGAP DEVRH GDLGNI +A G A ++ D I + G +++GR VVH DDLG+ G Sbjct: 8 LRGDSKITGTVTFEQANESAPTTVSWNITGHDPNAERGMHIHQFGDNTNGCTSAGPHYNPFKKTHGAPTDEVRHVGDLGNIKTDAEGNAVGSVQDKLIKVIGAESILGRTIVVHAGTDDLGRGG 131 The following BLAST results are available for this feature:
BLAST of FC920666 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 141
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920666 ID=FC920666; Name=FC920666; organism=Citrus clementina; type=EST; length=700bpback to top |