FC920667
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920667 vs. ExPASy Swiss-Prot
Match: HOX9_ORYSI (Homeobox-leucine zipper protein HOX9 OS=Oryza sativa subsp. indica GN=HOX9 PE=2 SV=2) HSP 1 Score: 339.347 bits (869), Expect = 1.152e-92 Identity = 170/232 (73.28%), Postives = 191/232 (82.33%), Query Frame = 2 Query: 2 RVYSECPQPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLSAMNKLLMEENDRLQKQVSHLVYENGYMRQQLHSAPATTTDNSCESVVMSGXXXXXXXXXXXXXXRDASNPAGLLAVAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLDPTKIAEILKDCPSWFRDCRCLDVLSVIPTGNGGTIELIYMQ 697 RVY+ECP+PSS RRQQL+R+CPIL+NIEPKQIKVWFQNRRCR+KQRKEASRLQ VNRKL+AMNKLLMEEN+RLQKQVS LV+EN YM+QQL + P+ D SCES V + RDASNP+GLL +AEETL EFLSKATGTAVDWV M GMKPGPDS GIVAVS C GVAARACGLV+L+PTKI EILKD PSWFRDCR L+V ++ P GNGGTIEL+YMQ Sbjct: 43 RVYAECPKPSSSRRQQLLRDCPILANIEPKQIKVWFQNRRCRDKQRKEASRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAYMKQQLQN-PSLGNDTSCESNVTT----------PQNPLRDASNPSGLLTIAEETLTEFLSKATGTAVDWVPMPGMKPGPDSFGIVAVSHGCRGVAARACGLVNLEPTKIVEILKDRPSWFRDCRSLEVFTMFPAGNGGTIELVYMQ 263
BLAST of FC920667 vs. ExPASy Swiss-Prot
Match: HOX10_ORYSJ (Homeobox-leucine zipper protein HOX10 OS=Oryza sativa subsp. japonica GN=HOX10 PE=2 SV=1) HSP 1 Score: 337.421 bits (864), Expect = 4.376e-92 Identity = 165/232 (71.12%), Postives = 193/232 (83.19%), Query Frame = 2 Query: 2 RVYSECPQPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLSAMNKLLMEENDRLQKQVSHLVYENGYMRQQLHSAPATTTDNSCESVVMSGXXXXXXXXXXXXXXRDASNPAGLLAVAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLDPTKIAEILKDCPSWFRDCRCLDVLSVIPTGNGGTIELIYMQ 697 RVY++CP+P+S RRQQL+RECPIL+NIEPKQIKVWFQNRRCR+KQRKE+SRLQ VNRKL+AMNKLLMEEN+RLQKQVS LV+EN +MRQQL + P D SCES V + RDASNP+GLL++AEETL EFLSKATGTA+DWVQM GMKPGPDS+GIVA+S C GVAARACGLV+L+PTK+ EILKD PSWFRDCR L+V ++IP GNGGT+EL+Y Q Sbjct: 41 RVYADCPKPTSSRRQQLLRECPILANIEPKQIKVWFQNRRCRDKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAHMRQQLQNTPLAN-DTSCESNVTT----------PQNPLRDASNPSGLLSIAEETLTEFLSKATGTAIDWVQMPGMKPGPDSVGIVAISHGCRGVAARACGLVNLEPTKVVEILKDRPSWFRDCRNLEVFTMIPAGNGGTVELVYTQ 261
BLAST of FC920667 vs. ExPASy Swiss-Prot
Match: HOX10_ORYSI (Homeobox-leucine zipper protein HOX10 OS=Oryza sativa subsp. indica GN=HOX10 PE=2 SV=2) HSP 1 Score: 337.421 bits (864), Expect = 4.376e-92 Identity = 165/232 (71.12%), Postives = 193/232 (83.19%), Query Frame = 2 Query: 2 RVYSECPQPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLSAMNKLLMEENDRLQKQVSHLVYENGYMRQQLHSAPATTTDNSCESVVMSGXXXXXXXXXXXXXXRDASNPAGLLAVAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLDPTKIAEILKDCPSWFRDCRCLDVLSVIPTGNGGTIELIYMQ 697 RVY++CP+P+S RRQQL+RECPIL+NIEPKQIKVWFQNRRCR+KQRKE+SRLQ VNRKL+AMNKLLMEEN+RLQKQVS LV+EN +MRQQL + P D SCES V + RDASNP+GLL++AEETL EFLSKATGTA+DWVQM GMKPGPDS+GIVA+S C GVAARACGLV+L+PTK+ EILKD PSWFRDCR L+V ++IP GNGGT+EL+Y Q Sbjct: 41 RVYADCPKPTSSRRQQLLRECPILANIEPKQIKVWFQNRRCRDKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAHMRQQLQNTPLAN-DTSCESNVTT----------PQNPLRDASNPSGLLSIAEETLTEFLSKATGTAIDWVQMPGMKPGPDSVGIVAISHGCRGVAARACGLVNLEPTKVVEILKDRPSWFRDCRNLEVFTMIPAGNGGTVELVYTQ 261
BLAST of FC920667 vs. ExPASy Swiss-Prot
Match: HOX29_ORYSJ (Homeobox-leucine zipper protein HOX29 OS=Oryza sativa subsp. japonica GN=HOX29 PE=2 SV=2) HSP 1 Score: 316.235 bits (809), Expect = 1.044e-85 Identity = 158/250 (63.20%), Postives = 191/250 (76.40%), Query Frame = 2 Query: 2 RVYSECPQPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLSAMNKLLMEENDRLQKQVSHLVYENGY-------MRQQLHSAP-----------ATTTDNSCESVVMSGXXXXXXXXXXXXXXRDASNPAGLLAVAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLDPTKIAEILKDCPSWFRDCRCLDVLSVIPTGNGGTIELIYMQ 697 R+Y ECP+PSSLRRQQL+RECP L+N++PKQIKVWFQNRRCREKQRKE+SRLQ +NRKL+AMNKLLMEENDRLQKQVS LVY++G M +++ + P AT TD SCESVV SG ++PAGL+++AEETL EFLSKATGTAV+W+QM GMKPGPDSIGI+A+S C+GVAARACGLV ++P K+AEILKD P W RDCR +DV++V+P G GTIEL+YMQ Sbjct: 26 RLYYECPKPSSLRRQQLVRECPALANVDPKQIKVWFQNRRCREKQRKESSRLQALNRKLTAMNKLLMEENDRLQKQVSQLVYDHGRHGVAAAGMMRRVPAFPPQAAAAAGHQLATATDTSCESVVTSGHHHQQQQHNVVQPPPRDASPAGLMSIAEETLTEFLSKATGTAVEWLQMPGMKPGPDSIGIIAISHGCAGVAARACGLVGMEPAKVAEILKDRPLWLRDCRSMDVVNVLPAGANGTIELLYMQ 275
BLAST of FC920667 vs. ExPASy Swiss-Prot
Match: HOX29_ORYSI (Homeobox-leucine zipper protein HOX29 OS=Oryza sativa subsp. indica GN=HOX29 PE=2 SV=2) HSP 1 Score: 316.235 bits (809), Expect = 1.044e-85 Identity = 158/250 (63.20%), Postives = 191/250 (76.40%), Query Frame = 2 Query: 2 RVYSECPQPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLSAMNKLLMEENDRLQKQVSHLVYENGY-------MRQQLHSAP-----------ATTTDNSCESVVMSGXXXXXXXXXXXXXXRDASNPAGLLAVAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLDPTKIAEILKDCPSWFRDCRCLDVLSVIPTGNGGTIELIYMQ 697 R+Y ECP+PSSLRRQQL+RECP L+N++PKQIKVWFQNRRCREKQRKE+SRLQ +NRKL+AMNKLLMEENDRLQKQVS LVY++G M +++ + P AT TD SCESVV SG ++PAGL+++AEETL EFLSKATGTAV+W+QM GMKPGPDSIGI+A+S C+GVAARACGLV ++P K+AEILKD P W RDCR +DV++V+P G GTIEL+YMQ Sbjct: 19 RLYYECPKPSSLRRQQLVRECPALANVDPKQIKVWFQNRRCREKQRKESSRLQALNRKLTAMNKLLMEENDRLQKQVSQLVYDHGRHGVAAAGMMRRVPAFPPQAAAAAGHQLATATDTSCESVVTSGHHHQQQQHNVVQPPPRDASPAGLMSIAEETLTEFLSKATGTAVEWLQMPGMKPGPDSIGIIAISHGCAGVAARACGLVGMEPAKVAEILKDRPLWLRDCRSMDVVNVLPAGANGTIELLYMQ 268 The following BLAST results are available for this feature:
BLAST of FC920667 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920667 ID=FC920667; Name=FC920667; organism=Citrus clementina; type=EST; length=701bpback to top |