FC920668

Overview
NameFC920668
Unique NameFC920668
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10260 contig Ccv1_Contig10260:6..694. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920668 vs. ExPASy Swiss-Prot
Match: CHSA_IPOCO (Chalcone synthase A (Fragment) OS=Ipomoea cordatotriloba GN=CHSA PE=3 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 3.000e-70
Identity = 122/173 (70.52%), Postives = 146/173 (84.39%), Query Frame = 2
Query:   80 AQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNR 598
            A+R +G A +LAIGTATP + V+QA YPD+YFRIT SEH+ E KEKF+R+C+KS I+KR++ LTEE+LKENPN+C Y   SL+ RQDI+V EVPKLGKEAA KAIKEWG+P S+ITHL+FCTTSGVDMPGAD+QLTKL+GL  SVKR MMYQQGC AG  +LRL K LAENN+
Sbjct:   14 AKRFEGHAKLLAIGTATPTNWVDQATYPDFYFRITNSEHLLEHKEKFRRICNKSKIRKRHLVLTEELLKENPNLCTYNDASLNTRQDILVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFQLTKLLGLNSSVKRLMMYQQGCNAGAAMLRLVKGLAENNK 186          

HSP 2 Score: 33.113 bits (74), Expect = 3.000e-70
Identity = 17/28 (60.71%), Postives = 20/28 (71.43%), Query Frame = 1
Query:  595 QGARVLVVCSEITAVTFRGPADTHLDSL 678
            +GARVLVVCS IT   FRGP+    D+L
Sbjct:  186 KGARVLVVCSGITINIFRGPSLEQDDNL 213          
BLAST of FC920668 vs. ExPASy Swiss-Prot
Match: CHSB_IPONI (Chalcone synthase B (Fragment) OS=Ipomoea nil GN=CHSB PE=3 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 6.653e-70
Identity = 119/173 (68.79%), Postives = 147/173 (84.97%), Query Frame = 2
Query:   80 AQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNR 598
            A++ +G A + AIGTATPA+ V+Q  YPD+YFRIT S+H+ E KEKF+R+C+KS I+KR++ LTEE+LK+NPN+C Y   SL+ RQDI+V EVPKLGKEAA KAIKEWG+P S+ITHL+FCTTSGVDMPGAD+QLTKL+GL  SVKR MMYQQGC AG  +LRLAKDLAE+N+
Sbjct:   16 AKKLEGDAKIWAIGTATPANWVDQTTYPDFYFRITNSQHLLEHKEKFRRICNKSKIRKRHLVLTEELLKKNPNLCTYNETSLNTRQDILVAEVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFQLTKLLGLNSSVKRLMMYQQGCNAGAAMLRLAKDLAESNK 188          

HSP 2 Score: 33.113 bits (74), Expect = 6.653e-70
Identity = 16/28 (57.14%), Postives = 20/28 (71.43%), Query Frame = 1
Query:  595 QGARVLVVCSEITAVTFRGPADTHLDSL 678
            +G RVLVVC+EIT   FRGP+    D+L
Sbjct:  188 KGGRVLVVCAEITINIFRGPSLEQDDNL 215          
BLAST of FC920668 vs. ExPASy Swiss-Prot
Match: CHSB_IPOTF (Chalcone synthase B (Fragment) OS=Ipomoea trifida GN=CHSB PE=3 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 8.675e-70
Identity = 123/177 (69.49%), Postives = 148/177 (83.62%), Query Frame = 2
Query:   74 RNAQR--ADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNR 598
            R A+R   +G A +LAIGTATPA+ V+Q  YPD+YFRIT S+H+ E KEKF+R+C+KS I+KR+M LTEE+LK+NPN+C Y   SL+ RQDI+V EVPKLGKEAA KAIK WG+P S+ITHL+FCTTSGVDMPGAD+QLTKL+GL  SVKR MMYQQGC AG  +LRLAKDLAENN+
Sbjct:   14 RRAKRFEIEGYAKILAIGTATPANWVDQTTYPDFYFRITNSQHLLEHKEKFRRICNKSNIRKRHMVLTEELLKKNPNLCTYNDASLNTRQDILVSEVPKLGKEAAMKAIKVWGRPISEITHLVFCTTSGVDMPGADFQLTKLLGLNSSVKRLMMYQQGCNAGAAMLRLAKDLAENNK 190          

HSP 2 Score: 34.2686 bits (77), Expect = 8.675e-70
Identity = 16/28 (57.14%), Postives = 20/28 (71.43%), Query Frame = 1
Query:  595 QGARVLVVCSEITAVTFRGPADTHLDSL 678
            +GARVLVVCSE+    FRGP+    D+L
Sbjct:  190 KGARVLVVCSEVMLSVFRGPSLQQEDNL 217          
BLAST of FC920668 vs. ExPASy Swiss-Prot
Match: CHSC_IPOPU (Chalcone synthase C (Fragment) OS=Ipomoea purpurea GN=CHSC PE=3 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 3.273e-69
Identity = 119/175 (68.00%), Postives = 145/175 (82.86%), Query Frame = 2
Query:   74 RNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNR 598
            R  +R DG A +LAIGTA PA+ V+Q  YPD+YFRIT SEH+ E KEKF+R+C+KS I+KR++ +TEE+LK+NPN+C Y   SL+ RQDI+V EVPKLGKEAA KAIKEWG+P S+ITHL+FCT+SGVDMPGAD+QL KL+GL  SV R MMYQQGC AG  +LRLAKDLAENN+
Sbjct:   14 RREKRFDGHAKILAIGTAIPANWVDQTTYPDFYFRITNSEHLLEYKEKFRRICNKSKIRKRHLVITEELLKKNPNLCTYNDASLNTRQDILVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTSSGVDMPGADFQLAKLLGLSSSVNRLMMYQQGCNAGAVMLRLAKDLAENNK 188          

HSP 2 Score: 32.7278 bits (73), Expect = 3.273e-69
Identity = 15/28 (53.57%), Postives = 19/28 (67.86%), Query Frame = 1
Query:  595 QGARVLVVCSEITAVTFRGPADTHLDSL 678
            +G RVLVVCSE+    FRGP+    D+L
Sbjct:  188 KGGRVLVVCSEVMLSVFRGPSLQQEDNL 215          
BLAST of FC920668 vs. ExPASy Swiss-Prot
Match: CHSA_IPOTR (Chalcone synthase A (Fragment) OS=Ipomoea triloba GN=CHSA PE=3 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 5.565e-69
Identity = 119/173 (68.79%), Postives = 145/173 (83.82%), Query Frame = 2
Query:   80 AQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNR 598
            A+R +G A +LAIGTATP + V+QA YPD+YFRIT SE + E KEKF+R+C+KS I+ R++ LTEE+LK++PN+C Y   SL+ RQDI+V EVPKLGKEAA KAIKEWG+P S+ITHL+FCTTSGVDMPGAD+QLTKL+GL  SVKR MMYQQGC AG  +LRL KDLAENN+
Sbjct:   14 AKRFEGHAKLLAIGTATPTNWVDQATYPDFYFRITNSERLLEHKEKFRRICNKSKIRFRHLVLTEELLKKSPNLCTYNDASLNTRQDILVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFQLTKLLGLNSSVKRLMMYQQGCNAGAAMLRLVKDLAENNK 186          

HSP 2 Score: 35.8094 bits (81), Expect = 5.565e-69
Identity = 18/28 (64.29%), Postives = 21/28 (75.00%), Query Frame = 1
Query:  595 QGARVLVVCSEITAVTFRGPADTHLDSL 678
            +GARVLVVCSEIT   FRGP+    D+L
Sbjct:  186 KGARVLVVCSEITINIFRGPSLEQDDNL 213          
BLAST of FC920668 vs. ExPASy Swiss-Prot
Match: CHSB_IPOTR (Chalcone synthase B (Fragment) OS=Ipomoea triloba GN=CHSB PE=3 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 2.737e-68
Identity = 119/177 (67.23%), Postives = 149/177 (84.18%), Query Frame = 2
Query:   74 RNAQR--ADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNR 598
            R A+R   +G A +LAIGTATPA+ V+Q  YPD+YFRIT S+H+ E KEKF+R+C+KS I+KR++ LTEE+L++NP++C Y   SL+ RQDI+V EVPKLGKEAA KAIKEWG+P S+ITHL+FCTTSGVDMPGAD++LTKL+GL  SVKR MMYQQGC AG  +LRLAKDLAE+N+
Sbjct:   14 RRAKRFEIEGYAKILAIGTATPANWVDQTTYPDFYFRITNSQHLLEHKEKFRRICNKSKIRKRHLVLTEELLQKNPSLCTYNETSLNTRQDILVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFRLTKLLGLNSSVKRLMMYQQGCNAGAAMLRLAKDLAESNK 190          

HSP 2 Score: 33.8834 bits (76), Expect = 2.737e-68
Identity = 16/28 (57.14%), Postives = 20/28 (71.43%), Query Frame = 1
Query:  595 QGARVLVVCSEITAVTFRGPADTHLDSL 678
            +G R+LVVCSEIT   FRGP+    D+L
Sbjct:  190 KGGRILVVCSEITINIFRGPSLEQDDNL 217          
BLAST of FC920668 vs. ExPASy Swiss-Prot
Match: CHSA_IPONI (Chalcone synthase A (Fragment) OS=Ipomoea nil GN=CHSA PE=3 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 2.738e-68
Identity = 118/175 (67.43%), Postives = 145/175 (82.86%), Query Frame = 2
Query:   74 RNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNR 598
            R  +R +G A +LAIGTA PA+ V+Q  YPD+YFRIT SEH+ E KEKF+R+C+KS I+KR++ +TEE+LK+NPN+C Y   SL+ RQDI+V EVPKLGKEAA KAIKEWG+P S+ITHL+FCT+SGVDMPGAD+QL KL+GL  SV R MMYQQGC AG  +LRLAKDLAENN+
Sbjct:   11 RREKRIEGHAKILAIGTAIPANWVDQTTYPDFYFRITNSEHLLEHKEKFRRICNKSKIRKRHLVITEELLKKNPNLCTYNEASLNTRQDILVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTSSGVDMPGADFQLAKLLGLSSSVNRLMMYQQGCNAGAAMLRLAKDLAENNK 185          

HSP 2 Score: 31.187 bits (69), Expect = 2.738e-68
Identity = 13/21 (61.90%), Postives = 16/21 (76.19%), Query Frame = 1
Query:  595 QGARVLVVCSEITAVTFRGPA 657
            +G RVLVVCSE+    FRGP+
Sbjct:  185 KGGRVLVVCSEVMLNVFRGPS 205          
BLAST of FC920668 vs. ExPASy Swiss-Prot
Match: TBSYN_HYPAN (Trihydroxybenzophenone synthase OS=Hypericum androsaemum PE=1 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 1.125e-66
Identity = 115/165 (69.70%), Postives = 133/165 (80.61%), Query Frame = 2
Query:  101 ATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENN 595
            A+VLAIGT  P H + Q DYPD+YFR T SEHMTELKEKFKR+C KS I+KR+ YLTEEILKEN  +  Y A SLDARQ I+  EVPKLG+EAA KAI EWGQP SKITH++F TTSG  MPGADY +T+L+GL  +V+R M+Y QGCFAGGT LR+AKDLAENN
Sbjct:   20 ASVLAIGTTNPEHFILQEDYPDFYFRNTNSEHMTELKEKFKRICVKSHIRKRHFYLTEEILKENQGIATYGAGSLDARQRILETEVPKLGQEAALKAIAEWGQPISKITHVVFATTSGFMMPGADYVITRLLGLNRTVRRVMLYNQGCFAGGTALRVAKDLAENN 184          

HSP 2 Score: 40.0466 bits (92), Expect = 1.125e-66
Identity = 17/26 (65.38%), Postives = 22/26 (84.62%), Query Frame = 1
Query:  595 QGARVLVVCSEITAVTFRGPADTHLD 672
            +GARVLVVC+E TA+TF  P ++HLD
Sbjct:  185 EGARVLVVCAENTAMTFHAPNESHLD 210          
BLAST of FC920668 vs. ExPASy Swiss-Prot
Match: BBS_PHASS (Bibenzyl synthase OS=Phalaenopsis sp. GN=BIBSY212 PE=2 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 1.125e-66
Identity = 106/182 (58.24%), Postives = 146/182 (80.22%), Query Frame = 2
Query:   53 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNR 598
            M +++ I+ A RADG A++LAIG A P + + Q+ YPD+YFR+T SEH+ +LK+KF+R+C+K+ I+KR+    EE L  NP    +M  SL+ RQ++ + E+PKLG +AATKAI++WGQPKS+ITHLIFCTTSG+D+PGADYQLT+++GL P+V+R M+YQQGCFAGGT LRLAK LAE+ +
Sbjct:    1 MLSLESIKKAPRADGFASILAIGRANPDNIIEQSAYPDFYFRVTNSEHLVDLKKKFQRICEKTAIRKRHFVWNEEFLTANPCFSTFMDKSLNVRQEVAISEIPKLGAKAATKAIEDWGQPKSRITHLIFCTTSGMDLPGADYQLTQILGLNPNVERVMLYQQGCFAGGTTLRLAKCLAESRK 182          

HSP 2 Score: 39.6614 bits (91), Expect = 1.125e-66
Identity = 17/29 (58.62%), Postives = 22/29 (75.86%), Query Frame = 1
Query:  592 QQGARVLVVCSEITAVTFRGPADTHLDSL 678
            ++GARVLVVC+E T V FR P++ H D L
Sbjct:  181 RKGARVLVVCAETTTVLFRAPSEEHQDDL 209          
BLAST of FC920668 vs. ExPASy Swiss-Prot
Match: VPS_PSINU (Phloroisovalerophenone synthase OS=Psilotum nudum GN=VPS PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 4.241e-66
Identity = 112/175 (64.00%), Postives = 140/175 (80.00%), Query Frame = 2
Query:   74 RNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNR 598
            R  +RA GP +VLAIG+A P +  +Q+ +PD+YF IT+S HM E+K KF RMC KS IKKR M++ E+IL+ +P++ +Y   SLD RQD++V EVPKLGK AA  AI EWGQPKS ITHLIFCT+SG+DMPGAD+ L KL+GLRP+V R M+YQQGCFAG TVLR+AKDLAENN+
Sbjct:   15 RKKERASGPVSVLAIGSANPPNVFHQSLFPDFYFNITQSNHMAEVKAKFTRMCAKSGIKKRRMHINEDILEAHPSIRSYHDNSLDVRQDMLVEEVPKLGKVAADNAIAEWGQPKSNITHLIFCTSSGIDMPGADWALMKLLGLRPTVNRVMVYQQGCFAGCTVLRIAKDLAENNK 189          

HSP 2 Score: 40.4318 bits (93), Expect = 4.241e-66
Identity = 15/28 (53.57%), Postives = 24/28 (85.71%), Query Frame = 1
Query:  595 QGARVLVVCSEITAVTFRGPADTHLDSL 678
            +G+R+LVVCSE+T ++FRGP + H ++L
Sbjct:  189 KGSRILVVCSELTLISFRGPTEDHPENL 216          
The following BLAST results are available for this feature:
BLAST of FC920668 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CHSA_IPOCO3.000e-7070.52Chalcone synthase A (Fragment) OS=Ipomoea cordatot... [more]
CHSB_IPONI6.653e-7068.79Chalcone synthase B (Fragment) OS=Ipomoea nil GN=C... [more]
CHSB_IPOTF8.675e-7069.49Chalcone synthase B (Fragment) OS=Ipomoea trifida ... [more]
CHSC_IPOPU3.273e-6968.00Chalcone synthase C (Fragment) OS=Ipomoea purpurea... [more]
CHSA_IPOTR5.565e-6968.79Chalcone synthase A (Fragment) OS=Ipomoea triloba ... [more]
CHSB_IPOTR2.737e-6867.23Chalcone synthase B (Fragment) OS=Ipomoea triloba ... [more]
CHSA_IPONI2.738e-6867.43Chalcone synthase A (Fragment) OS=Ipomoea nil GN=C... [more]
TBSYN_HYPAN1.125e-6669.70Trihydroxybenzophenone synthase OS=Hypericum andro... [more]
BBS_PHASS1.125e-6658.24Bibenzyl synthase OS=Phalaenopsis sp. GN=BIBSY212 ... [more]
VPS_PSINU4.241e-6664.00Phloroisovalerophenone synthase OS=Psilotum nudum ... [more]

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Properties
Property NameValue
Genbank descriptionC32011E03EF RVDevelop1 Citrus clementina cDNA clone C32011E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920668 ID=FC920668; Name=FC920668; organism=Citrus clementina; type=EST; length=688bp
GGAACTCACCAAGCACGAGCCACCAACATATTCATTAAGGGTTCAACTTG
AAATGGCAACCGTTCAAGAGATCAGAAACGCTCAGCGTGCCGACGGCCCG
GCCACCGTCCTCGCCATCGGTACGGCCACGCCTGCCCACAGTGTCAACCA
GGCTGATTATCCCGACTATTACTTCAGGATCACAAAGAGCGAGCATATGA
CGGAGCTTAAAGAGAAGTTCAAGCGCATGTGTGACAAGTCGATGATTAAG
AAGCGTTACATGTACTTAACGGAAGAGATTTTGAAGGAAAACCCCAACAT
GTGCGCTTACATGGCTCCATCACTCGACGCACGTCAAGACATTGTGGTGG
TCGAAGTGCCGAAGCTCGGGAAAGAAGCTGCTACAAAGGCCATCAAAGAA
TGGGGCCAGCCCAAGTCTAAGATCACCCACCTCATCTTCTGCACCACCTC
CGGCGTCGACATGCCCGGCGCCGACTACCAGCTCACCAAACTGATCGGCC
TGCGCCCCTCCGTCAAGCGCTTCATGATGTACCAACAAGGATGTTTCGCC
GGCGGCACTGTTCTTCGCCTCGCTAAAGACTTGGCTGAGAACAACAGGGC
GCTCGCGTTCTTGTTGTCTGTTCGGAGATCACGGCAGTCACTTTCCGCGG
CCCTGCCGATACTCATCTTGATTCTCTTTGTGAGCCAG
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