FC920677

Overview
NameFC920677
Unique NameFC920677
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length489
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15279 contig Ccv1_Contig15279:575..1063. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_BACAN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus anthracis GN=metE PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 4.531e-52
Identity = 96/150 (64.00%), Postives = 117/150 (78.00%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNF 451
            L+GF+FT NGWVQSYGSRCVKPP+IYGDV+    MT+  +  AQS+T + +KGMLTGPVTILNWSFVRND PR E  YQIALA++ E+E LE +GI VIQ+DE ALREG+PL++ +   Y+ WAV SF +    V + TQIHTHMCYSNF
Sbjct:  502 LAGFSFTKNGWVQSYGSRCVKPPVIYGDVAFINGMTIKETVYAQSLTEKVVKGMLTGPVTILNWSFVRNDIPRKEVSYQIALALRHEIELLESSGIRVIQVDEPALREGMPLKEKDWDAYITWAVQSFLLATSSVANETQIHTHMCYSNF 651
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_BACAH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus thuringiensis (strain Al Hakam) GN=metE PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 4.531e-52
Identity = 96/150 (64.00%), Postives = 117/150 (78.00%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNF 451
            L+GF+FT NGWVQSYGSRCVKPP+IYGDV+    MT+  +  AQS+T + +KGMLTGPVTILNWSFVRND PR E  YQIALA++ E+E LE +GI VIQ+DE ALREG+PL++ +   Y+ WAV SF +    V + TQIHTHMCYSNF
Sbjct:  502 LAGFSFTKNGWVQSYGSRCVKPPVIYGDVAFINGMTIKETVYAQSLTEKVVKGMLTGPVTILNWSFVRNDIPRKEVSYQIALALRHEIELLESSGIRVIQVDEPALREGMPLKEKDWDAYITWAVQSFLLATSSVANETQIHTHMCYSNF 651
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_BACAC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=metE PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 4.531e-52
Identity = 96/150 (64.00%), Postives = 117/150 (78.00%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNF 451
            L+GF+FT NGWVQSYGSRCVKPP+IYGDV+    MT+  +  AQS+T + +KGMLTGPVTILNWSFVRND PR E  YQIALA++ E+E LE +GI VIQ+DE ALREG+PL++ +   Y+ WAV SF +    V + TQIHTHMCYSNF
Sbjct:  502 LAGFSFTKNGWVQSYGSRCVKPPVIYGDVAFINGMTIKETVYAQSLTEKVVKGMLTGPVTILNWSFVRNDIPRKEVSYQIALALRHEIELLESSGIRVIQVDEPALREGMPLKEKDWDAYITWAVQSFLLATSSVANETQIHTHMCYSNF 651
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_BACAA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus anthracis (strain A0248) GN=metE PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 4.531e-52
Identity = 96/150 (64.00%), Postives = 117/150 (78.00%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNF 451
            L+GF+FT NGWVQSYGSRCVKPP+IYGDV+    MT+  +  AQS+T + +KGMLTGPVTILNWSFVRND PR E  YQIALA++ E+E LE +GI VIQ+DE ALREG+PL++ +   Y+ WAV SF +    V + TQIHTHMCYSNF
Sbjct:  502 LAGFSFTKNGWVQSYGSRCVKPPVIYGDVAFINGMTIKETVYAQSLTEKVVKGMLTGPVTILNWSFVRNDIPRKEVSYQIALALRHEIELLESSGIRVIQVDEPALREGMPLKEKDWDAYITWAVQSFLLATSSVANETQIHTHMCYSNF 651
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_SYNJB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Synechococcus sp. GN=metE PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 5.918e-52
Identity = 98/160 (61.25%), Postives = 118/160 (73.75%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTLSTHIDMM 481
            L GFAFT +GWVQSYGSRCV+PPI+YGDV RP+ MTV    +AQS T +P+KGMLTGPVT+LNWSF R D PR E   QIALA++ EV DLE AG  ++Q+DE ALREGLPL+K     YL WAV +FR+   G +  TQIHTHMCYS F  +  HI+ +
Sbjct:  488 LEGFAFTEHGWVQSYGSRCVRPPILYGDVVRPQPMTVREFQVAQSHTQKPVKGMLTGPVTMLNWSFPRVDIPRREQALQIALALRAEVADLEAAGAVMVQVDEPALREGLPLKKERWPEYLSWAVDAFRLATGGAKPETQIHTHMCYSEFGDIIEHIERL 647
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_STRSY (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus suis (strain 05ZYH33) GN=metE PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 5.918e-52
Identity = 104/161 (64.60%), Postives = 123/161 (76.40%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTLSTHIDMM 481
            LSG+ F+ NGWVQSYG R VKPPII+GDV+R   +TV WSS AQS T +P+KGMLTGPVTILNWSF R D    E+  QIALAIK+EV DLE AGI +IQIDEAALRE LPLR+S+ ++ YLDWA+ +FR+ +  V   TQIHTHMCYS FT +   ID M
Sbjct:  492 LSGYLFSKNGWVQSYGMRGVKPPIIWGDVTRLNPITVKWSSYAQSRTNKPVKGMLTGPVTILNWSFPREDISIKESTLQIALAIKEEVLDLEAAGIKIIQIDEAALREKLPLRRSDWYSEYLDWAIPAFRLVHSTVAPDTQIHTHMCYSEFTDIIPAIDNM 652
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_DESRM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Desulfotomaculum reducens (strain MI-1) GN=metE PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 5.918e-52
Identity = 97/160 (60.62%), Postives = 119/160 (74.38%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTLSTHIDMM 481
            LSGF FT NGWVQSYGSRCVKP +I+GDVSRPK MT+     A+S T + +KGMLTGPVTILNWS+ R+D  R   C QIALAI+DE+ DL+KAGI +IQ+DEAA +EG PLRK + A+Y +WAV SF++        TQIHTHMCYS+F  +   I+ M
Sbjct:  502 LSGFVFTQNGWVQSYGSRCVKPTVIFGDVSRPKPMTIDTILYAKSKTNKIVKGMLTGPVTILNWSYCRSDMERSAVCEQIALAIRDEINDLQKAGIKIIQVDEAAFKEGYPLRKEKVAYYENWAVKSFKLAVSSAAIETQIHTHMCYSDFNDIIHTIEKM 661
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_STRP4 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=metE PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 7.729e-52
Identity = 103/161 (63.98%), Postives = 122/161 (75.78%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTLSTHIDMM 481
            LSG+ F+ NGWVQSYG R VKPPII+GDV+R   +TV WSS AQS T +P+KGMLTGPVTILNWSF R D    ++  QIALAIKDEV DLE AG+ +IQIDEAALRE LPLR+S+ +  YLDWA+ +FR+ +  V   TQIHTHMCYS FT +   ID M
Sbjct:  492 LSGYLFSKNGWVQSYGMRGVKPPIIWGDVTRLNPITVKWSSYAQSRTNKPVKGMLTGPVTILNWSFPREDISIKDSTLQIALAIKDEVLDLEAAGVKIIQIDEAALREKLPLRRSDWYEDYLDWAIPAFRLVHSTVASDTQIHTHMCYSEFTDIIPAIDNM 652
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_STRGC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=metE PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 7.729e-52
Identity = 103/161 (63.98%), Postives = 122/161 (75.78%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTLSTHIDMM 481
            LSG+ F+ NGWVQSYG R VKPPII+GDV+R   +TV WSS AQS T +P+KGMLTGPVTILNWSF R D    ++  QIALAIKDEV DLE AG+ +IQIDEAALRE LPLR+S+ +  YLDWA+ +FR+ +  V   TQIHTHMCYS FT +   ID M
Sbjct:  492 LSGYLFSKNGWVQSYGMRGVKPPIIWGDVTRLNPITVKWSSYAQSRTEKPVKGMLTGPVTILNWSFPREDISIKDSTLQIALAIKDEVLDLEAAGVKIIQIDEAALREKLPLRRSDWYEDYLDWAIPAFRLVHSTVAPDTQIHTHMCYSEFTDIIPAIDNM 652
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_ENTS8 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=metE PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 7.729e-52
Identity = 96/157 (61.15%), Postives = 114/157 (72.61%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTLSTHI 472
            L GF FT NGWVQSYGSRCVKPP++ GD+SRP  +TV W+  AQS+T +P+KGMLTGPVTIL WSF R D  R     QIALA++DEV DLE AGI +IQIDE ALREGLPL++S+   YL W V +FR+     +D TQIHTHMCY  F  +   I
Sbjct:  498 LDGFVFTQNGWVQSYGSRCVKPPVVIGDISRPAPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPREDVSRETIAKQIALALRDEVADLEAAGIGIIQIDEPALREGLPLKRSDWDAYLAWGVEAFRLNAAVAKDDTQIHTHMCYCEFNDIMDSI 654
The following BLAST results are available for this feature:
BLAST of FC920677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 270
Match NameE-valueIdentityDescription
METE_BACAN4.531e-5264.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACAH4.531e-5264.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACAC4.531e-5264.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACAA4.531e-5264.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SYNJB5.918e-5261.255-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRSY5.918e-5264.605-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_DESRM5.918e-5260.635-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRP47.729e-5263.985-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRGC7.729e-5263.985-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ENTS87.729e-5261.155-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC32011F03EF RVDevelop1 Citrus clementina cDNA clone C32011F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920677 ID=FC920677; Name=FC920677; organism=Citrus clementina; type=EST; length=489bp
ATTATCAGGTTTCGCCTTCACTGCCAATGGGTGGGTGCAATCCTATGGAT
CTCGCTGTGTGAAGCCACCCATCATCTATGGTGATGTGAGCCGTCCCAAG
GCTATGACCGTCTTCTGGTCCTCCTTGGCTCAGAGCATGACAGCTCGCCC
AATGAAAGGAATGCTTACTGGCCCTGTCACCATTCTCAACTGGTCCTTTG
TTAGAAATGACCAGCCCAGACATGAAACCTGCTACCAGATTGCTTTGGCC
ATCAAGGACGAAGTCGAGGATCTTGAGAAGGCAGGCATTAACGTTATTCA
AATTGATGAGGCTGCCTTGAGGGAAGGATTGCCTCTTAGGAAATCTGAGC
ATGCTTTCTACTTGGACTGGGCAGTCCACTCCTTCAGAATCACCAACTGT
GGCGTCCAGGACACTACCCAGATCCACACCCACATGTGCTACTCCAACTT
CACGACATTATCCACTCATATCGACATGATGCTGATGTG
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