FC920677

Overview
NameFC920677
Unique NameFC920677
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length489
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_BACLD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=metE PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 7.729e-52
Identity = 97/158 (61.39%), Postives = 119/158 (75.32%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTLSTHID 475
            L GFAFT   WVQSYGSRCV+PP+IYGDV   + MTV  +  AQS+T++ +KGMLTGPVTILNWSF R D PR E  +QIA A++ EVE LEKAGI +IQ+DE ALREGLPL++ +   YL WA  +FR++   V+DTTQIHTHMCYSNF  +   I+
Sbjct:  502 LGGFAFTKYAWVQSYGSRCVRPPVIYGDVEFKEPMTVKETVYAQSLTSKKVKGMLTGPVTILNWSFARYDLPRKEIAFQIACALRKEVEALEKAGIQIIQVDEPALREGLPLKERDWDEYLKWAAEAFRLSTSSVEDTTQIHTHMCYSNFEDIVDAIE 659          
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_STRSV (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus sanguinis (strain SK36) GN=metE PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.009e-51
Identity = 103/161 (63.98%), Postives = 122/161 (75.78%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTLSTHIDMM 481
            LSG+ F+ NGWVQSYG R VKPPII+GDV+R   +TV WSS AQS T +P+KGMLTGPVTILNWSF R D    ++  QIALAIKDEV DLE AG+ +IQIDEAALRE LPLR+S+ +  YLDWA+ +FR+ +  V   TQIHTHMCYS FT +   ID M
Sbjct:  492 LSGYLFSKNGWVQSYGMRGVKPPIIWGDVTRLNPITVKWSSYAQSRTDKPVKGMLTGPVTILNWSFPREDISIKDSTLQIALAIKDEVLDLEAAGVKIIQIDEAALREKLPLRRSDWYEDYLDWAIPAFRLVHSTVAPDTQIHTHMCYSEFTDIIPAIDNM 652          
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_STRR6 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=metE PE=3 SV=2)

HSP 1 Score: 202.216 bits (513), Expect = 1.009e-51
Identity = 103/161 (63.98%), Postives = 122/161 (75.78%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTLSTHIDMM 481
            LSG+ F+ NGWVQSYG R VKPPII+GDV+R   +TV WSS AQS T +P+KGMLTGPVTILNWSF R D    ++  QIALAIKDEV DLE AG+ +IQIDEAALRE LPLR+S+ +  YLDWA+ +FR+ +  V   TQIHTHMCYS FT +   ID M
Sbjct:  492 LSGYLFSKNGWVQSYGMRGVKPPIIWGDVTRLNPITVKWSSYAQSRTNKPVKGMLTGPVTILNWSFPREDISIKDSTLQIALAIKDEVLDLEAAGVKIIQIDEAALREKLPLRRSDWYEDYLDWAIPAFRLVHSTVAPDTQIHTHMCYSEFTDIIPAIDNM 652          
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_STRPN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus pneumoniae GN=metE PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.009e-51
Identity = 103/161 (63.98%), Postives = 122/161 (75.78%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTLSTHIDMM 481
            LSG+ F+ NGWVQSYG R VKPPII+GDV+R   +TV WSS AQS T +P+KGMLTGPVTILNWSF R D    ++  QIALAIKDEV DLE AG+ +IQIDEAALRE LPLR+S+ +  YLDWA+ +FR+ +  V   TQIHTHMCYS FT +   ID M
Sbjct:  492 LSGYLFSKNGWVQSYGMRGVKPPIIWGDVTRLNPITVKWSSYAQSRTNKPVKGMLTGPVTILNWSFPREDISIKDSTLQIALAIKDEVLDLEAAGVKIIQIDEAALREKLPLRRSDWYEDYLDWAIPAFRLVHSTVAPDTQIHTHMCYSEFTDIIPAIDNM 652          
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_STRPI (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=metE PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.009e-51
Identity = 103/161 (63.98%), Postives = 122/161 (75.78%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTLSTHIDMM 481
            LSG+ F+ NGWVQSYG R VKPPII+GDV+R   +TV WSS AQS T +P+KGMLTGPVTILNWSF R D    ++  QIALAIKDEV DLE AG+ +IQIDEAALRE LPLR+S+ +  YLDWA+ +FR+ +  V   TQIHTHMCYS FT +   ID M
Sbjct:  492 LSGYLFSKNGWVQSYGMRGVKPPIIWGDVTRLNPITVKWSSYAQSRTNKPVKGMLTGPVTILNWSFPREDISIKDSTLQIALAIKDEVLDLEAAGVKIIQIDEAALREKLPLRRSDWYEDYLDWAIPAFRLVHSTVAPDTQIHTHMCYSEFTDIIPAIDNM 652          
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_STRP2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=metE PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.009e-51
Identity = 103/161 (63.98%), Postives = 122/161 (75.78%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTLSTHIDMM 481
            LSG+ F+ NGWVQSYG R VKPPII+GDV+R   +TV WSS AQS T +P+KGMLTGPVTILNWSF R D    ++  QIALAIKDEV DLE AG+ +IQIDEAALRE LPLR+S+ +  YLDWA+ +FR+ +  V   TQIHTHMCYS FT +   ID M
Sbjct:  492 LSGYLFSKNGWVQSYGMRGVKPPIIWGDVTRLNPITVKWSSYAQSRTNKPVKGMLTGPVTILNWSFPREDISIKDSTLQIALAIKDEVLDLEAAGVKIIQIDEAALREKLPLRRSDWYEDYLDWAIPAFRLVHSTVAPDTQIHTHMCYSEFTDIIPAIDNM 652          
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_PSEE4 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas entomophila (strain L48) GN=metE PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.009e-51
Identity = 98/160 (61.25%), Postives = 115/160 (71.88%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTLSTHIDMM 481
            L G+ FT  GWVQSYGSRCVKP +I+GD+SRPKAMTV W   AQ +T + MKGMLTGPVT+L WSF R D  R     Q+ALAI+DEV DLE AGI ++QIDEAA REGLPLR+S    YL+WA  +FR+    V+D TQIHTHMCYS F  +   I  M
Sbjct:  506 LDGYVFTRFGWVQSYGSRCVKPAVIFGDLSRPKAMTVEWIKYAQGLTRKAMKGMLTGPVTMLMWSFPREDVTREVQARQLALAIRDEVVDLEAAGIKIVQIDEAAFREGLPLRRSAWPHYLEWATEAFRLCASDVRDETQIHTHMCYSEFNDVIESIAAM 665          
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_STRTD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=metE PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 1.722e-51
Identity = 103/159 (64.78%), Postives = 121/159 (76.10%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTLSTHID 475
            LSG+ F+ NGWVQSYG R VKPPII+GDV+R   +TV WSS AQS T +P+KGMLTGPVTILNWSF R D    ++  QIALAIKDEV DLE AGI +IQIDEAALRE LPLR+S+ +  YLDWA+ +FR+ +  V   TQIHTHMCYS FT +   ID
Sbjct:  492 LSGYLFSKNGWVQSYGMRGVKPPIIWGDVTRLNPITVKWSSYAQSRTDKPVKGMLTGPVTILNWSFPREDISIKDSTLQIALAIKDEVLDLEAAGIKIIQIDEAALREKLPLRRSDWYEDYLDWAIPAFRLVHSTVAPDTQIHTHMCYSEFTDIIPAID 650          
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_STRAW (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptomyces avermitilis GN=metE PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 1.722e-51
Identity = 95/158 (60.13%), Postives = 122/158 (77.22%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTLSTHID 475
            L+G+  T +GWVQSYG+R V+PP++ GD+SRP+ MTV W++ AQS+T RP+KGMLTGPVT+L WSFVR+DQP  ET  Q+ALA++DEV DLE AG +VIQ+DE ALRE LPLR ++   YL WA  +FR+T  GV+  TQIHTHMCY+ F  +   ID
Sbjct:  513 LTGYLTTQHGWVQSYGTRYVRPPVLAGDISRPEPMTVPWTTYAQSLTDRPVKGMLTGPVTMLAWSFVRDDQPLGETARQVALALRDEVGDLEAAGTSVIQVDEPALRETLPLRAADRPAYLAWATEAFRLTTGGVRPDTQIHTHMCYAEFGDIVQAID 670          
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_PSEPW (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas putida (strain W619) GN=metE PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 1.722e-51
Identity = 98/160 (61.25%), Postives = 115/160 (71.88%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTLSTHIDMM 481
            L G+ FT  GWVQSYGSRCVKP +IYGD+SRP+AMTV W   AQ +T + MKGMLTGPVT+L WSF R D  R     Q+ALAI+DEV DLE A I ++QIDEAA REGLPLR+S    YL+WA  +FR+   GV+D TQIHTHMCYS F  +   I  M
Sbjct:  510 LDGYVFTRFGWVQSYGSRCVKPAVIYGDLSRPEAMTVAWIRYAQGLTRKVMKGMLTGPVTMLMWSFPREDVSRETQARQLALAIRDEVLDLEAADIKIVQIDEAAFREGLPLRRSAWPAYLEWATEAFRLCASGVRDETQIHTHMCYSEFNDVIESIAAM 669          
The following BLAST results are available for this feature:
BLAST of FC920677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 270
Match NameE-valueIdentityDescription
METE_BACLD7.729e-5261.395-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRSV1.009e-5163.985-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRR61.009e-5163.985-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRPN1.009e-5163.985-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRPI1.009e-5163.985-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRP21.009e-5163.985-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEE41.009e-5161.255-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRTD1.722e-5164.785-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRAW1.722e-5160.135-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEPW1.722e-5161.255-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC32011F03EF RVDevelop1 Citrus clementina cDNA clone C32011F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920677 ID=FC920677; Name=FC920677; organism=Citrus clementina; type=EST; length=489bp
ATTATCAGGTTTCGCCTTCACTGCCAATGGGTGGGTGCAATCCTATGGAT
CTCGCTGTGTGAAGCCACCCATCATCTATGGTGATGTGAGCCGTCCCAAG
GCTATGACCGTCTTCTGGTCCTCCTTGGCTCAGAGCATGACAGCTCGCCC
AATGAAAGGAATGCTTACTGGCCCTGTCACCATTCTCAACTGGTCCTTTG
TTAGAAATGACCAGCCCAGACATGAAACCTGCTACCAGATTGCTTTGGCC
ATCAAGGACGAAGTCGAGGATCTTGAGAAGGCAGGCATTAACGTTATTCA
AATTGATGAGGCTGCCTTGAGGGAAGGATTGCCTCTTAGGAAATCTGAGC
ATGCTTTCTACTTGGACTGGGCAGTCCACTCCTTCAGAATCACCAACTGT
GGCGTCCAGGACACTACCCAGATCCACACCCACATGTGCTACTCCAACTT
CACGACATTATCCACTCATATCGACATGATGCTGATGTG
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