FC920677

Overview
NameFC920677
Unique NameFC920677
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length489
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15279 contig Ccv1_Contig15279:575..1063. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_CANAL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Candida albicans GN=MET6 PE=1 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 1.458e-50
Identity = 98/150 (65.33%), Postives = 117/150 (78.00%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRK-SEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSN 448
            L+GFAFT NGWVQSYGSR V+PPII GDVSRPKAMTV  S  AQS+T++PMKGMLTGPVTIL WSF R+D        Q+ LA++DEV DLE AGI VIQ+DE A+REGLPLR   E + YL+WA  SFR+   GV+++TQIH+H CYS+
Sbjct:  513 LNGFAFTTNGWVQSYGSRYVRPPIIVGDVSRPKAMTVKESVYAQSITSKPMKGMLTGPVTILRWSFPRDDVSGKIQALQLGLALRDEVNDLEGAGITVIQVDEPAIREGLPLRAGKERSDYLNWAAQSFRVATSGVENSTQIHSHFCYSD 662          
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_VIBPA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio parahaemolyticus GN=metE PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 1.904e-50
Identity = 92/153 (60.13%), Postives = 116/153 (75.82%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTL 460
            L+GF  T  GWVQSYGSRCVKP I+  D+ R K +TV WS+ AQS+T++ MKGMLTGPVTIL W+F R D  R E   Q+ALA++DEV DL+ AGIN+IQIDE A+REGLPL+K +H  YL+WAV++F+I+    +  TQIHTHMCYS F  +
Sbjct:  503 LAGFQTTKFGWVQSYGSRCVKPAIVVADIEREKPITVEWSTYAQSLTSKQMKGMLTGPVTILCWTFPREDITRQEIAQQLALALRDEVSDLQDAGINIIQIDEPAIREGLPLKKRDHKAYLEWAVNAFKISAASAKPETQIHTHMCYSEFNEI 655          
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_CORGL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Corynebacterium glutamicum GN=metE PE=1 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 1.904e-50
Identity = 92/157 (58.60%), Postives = 115/157 (73.25%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTLSTHI 472
            L GF  TANGWVQSYGSRCV+PP+++G+VSRP  MTV W   AQS+T + +KGMLTGPVTIL WSFVR+DQP   T  Q+ALA++DE+ DL +AG  +IQ+DE A+RE LPLR  +   YL W+V SFR+   G  D  QIHTHMCYS F  + + +
Sbjct:  485 LDGFLSTANGWVQSYGSRCVRPPVLFGNVSRPAPMTVKWFQYAQSLTQKHVKGMLTGPVTILAWSFVRDDQPLATTADQVALALRDEINDLIEAGAKIIQVDEPAIRELLPLRDVDKPAYLQWSVDSFRLATAGAPDDVQIHTHMCYSEFNEVISSV 641          
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_CORGB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Corynebacterium glutamicum (strain R) GN=metE PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 1.904e-50
Identity = 92/157 (58.60%), Postives = 115/157 (73.25%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTLSTHI 472
            L GF  TANGWVQSYGSRCV+PP+++G+VSRP  MTV W   AQS+T + +KGMLTGPVTIL WSFVR+DQP   T  Q+ALA++DE+ DL +AG  +IQ+DE A+RE LPLR  +   YL W+V SFR+   G  D  QIHTHMCYS F  + + +
Sbjct:  485 LDGFLSTANGWVQSYGSRCVRPPVLFGNVSRPAPMTVKWFQYAQSLTQKHVKGMLTGPVTILAWSFVRDDQPLATTADQVALALRDEINDLIEAGAKIIQVDEPAIRELLPLRDVDKPAYLQWSVDSFRLATAGAPDDVQIHTHMCYSEFNEVISSV 641          
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_VIBCH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio cholerae GN=metE PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 2.486e-50
Identity = 93/153 (60.78%), Postives = 115/153 (75.16%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTL 460
            L+GF  T  GWVQSYGSRCVKP I+  D+ R K +TV WS+ AQS+T++ MKGMLTGPVTIL W+F R D  R E   Q+ALA++DEV DL+ AGIN+IQIDE A+REGLPL+K +H  YLDWAV +F+I+    +  TQIHTHMCYS F  +
Sbjct:  503 LAGFQTTQFGWVQSYGSRCVKPAIVVADIEREKPITVEWSTYAQSLTSKQMKGMLTGPVTILCWTFPREDISRQEIAQQLALALRDEVADLQDAGINIIQIDEPAIREGLPLKKRDHQTYLDWAVQAFKISAGSARPETQIHTHMCYSEFNEI 655          
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_LACPL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Lactobacillus plantarum GN=metE PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 5.539e-50
Identity = 95/153 (62.09%), Postives = 121/153 (79.08%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTL 460
            L+GF  T NGWVQSYGSR V+PP+I+GDV+  + +TV  S  AQS+T +P+KGMLT P+TI+NWSFVR+D PR +   QIALA++ EV++LEKAGI +IQ+DE ALREGLPL++     YLD AV+SF+IT  GVQ+ TQIHTHMCYSNF  +
Sbjct:  507 LTGFYATQNGWVQSYGSRGVRPPVIFGDVAYTEPITVAESVYAQSLTDQPVKGMLTAPLTIINWSFVRDDIPRAQVQNQIALALRQEVQNLEKAGIKIIQVDEPALREGLPLKQRHWQAYLDEAVYSFKITTTGVQNDTQIHTHMCYSNFADI 659          
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_VIBVU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio vulnificus GN=metE PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 9.448e-50
Identity = 92/153 (60.13%), Postives = 114/153 (74.51%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTL 460
            L+GF  T  GWVQSYGSRCVKP I+  D+ R + +TV WS+ AQS+T++ MKGMLTGPVTIL W+F R D  R     Q+ALA++DEV DL+ AGIN+IQIDE A+REGLPL+K +H  YLDWAV +FRI+    +  TQIHTHMCYS F  +
Sbjct:  503 LAGFQTTQFGWVQSYGSRCVKPAIVVADIEREQPITVGWSTYAQSLTSKQMKGMLTGPVTILCWTFPREDISRKAIAQQLALALRDEVSDLQDAGINIIQIDEPAIREGLPLKKRDHQNYLDWAVEAFRISAASARPETQIHTHMCYSEFNEI 655          
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_STRMU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus mutans GN=metE PE=1 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 9.448e-50
Identity = 98/150 (65.33%), Postives = 113/150 (75.33%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNF 451
            L+GF  T  GWVQSYGSR VKPPIIYGDV   + +TV  +  AQS+T RP+KGMLTGP+TI NWSF R D PR +   QI LAIKDE++ LE AGI +IQ+DEAALREGLPLRKS+   YLD AVH+F I    V+D TQIHTHMCYS F
Sbjct:  487 LAGFTTTKFGWVQSYGSRAVKPPIIYGDVQHLEPITVEETVYAQSLTDRPVKGMLTGPITITNWSFERTDIPRDQLFNQIGLAIKDEIKLLENAGIAIIQVDEAALREGLPLRKSKQKAYLDDAVHAFHIATSSVKDETQIHTHMCYSKF 636          
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_COREF (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Corynebacterium efficiens GN=metE PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 1.612e-49
Identity = 93/153 (60.78%), Postives = 114/153 (74.51%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTL 460
            L GF  T NGWVQSYGSRCV+PPI++G V+RP+ MTV W + AQS+T RP+KGMLTGPVTIL WSFVR+DQP   T  QIALA+++E+ DL  AG  +IQ+DE A+RE LPLR++E   Y  WAV +FR++     D  QIHTHMCYS F  L
Sbjct:  490 LDGFLTTTNGWVQSYGSRCVRPPILFGTVTRPEPMTVRWFAHAQSLTNRPVKGMLTGPVTILAWSFVRDDQPLAVTADQIALALREEITDLVDAGAKIIQVDEPAIRELLPLRRAEQDAYTRWAVGAFRLSTSTAPDHVQIHTHMCYSEFNEL 642          
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_VIBVY (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio vulnificus (strain YJ016) GN=metE PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 2.105e-49
Identity = 91/153 (59.48%), Postives = 114/153 (74.51%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTL 460
            L+GF  T  GWVQSYGSRCVKP I+  D+ R + +TV WS+ AQS+T++ MKGMLTGPVTIL W+F R D  R     Q+ALA++DEV DL+ AGIN+IQIDE A+REGLPL+K +H  YLDWA+ +FRI+    +  TQIHTHMCYS F  +
Sbjct:  503 LAGFQTTQFGWVQSYGSRCVKPAIVVADIEREQPITVGWSTYAQSLTSKQMKGMLTGPVTILCWTFPREDISRKAIAQQLALALRDEVSDLQDAGINIIQIDEPAIREGLPLKKRDHQNYLDWALEAFRISAASARPETQIHTHMCYSEFNEI 655          
The following BLAST results are available for this feature:
BLAST of FC920677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 270
Match NameE-valueIdentityDescription
METE_CANAL1.458e-5065.335-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBPA1.904e-5060.135-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CORGL1.904e-5058.605-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CORGB1.904e-5058.605-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBCH2.486e-5060.785-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LACPL5.539e-5062.095-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBVU9.448e-5060.135-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRMU9.448e-5065.335-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_COREF1.612e-4960.785-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBVY2.105e-4959.485-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC32011F03EF RVDevelop1 Citrus clementina cDNA clone C32011F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920677 ID=FC920677; Name=FC920677; organism=Citrus clementina; type=EST; length=489bp
ATTATCAGGTTTCGCCTTCACTGCCAATGGGTGGGTGCAATCCTATGGAT
CTCGCTGTGTGAAGCCACCCATCATCTATGGTGATGTGAGCCGTCCCAAG
GCTATGACCGTCTTCTGGTCCTCCTTGGCTCAGAGCATGACAGCTCGCCC
AATGAAAGGAATGCTTACTGGCCCTGTCACCATTCTCAACTGGTCCTTTG
TTAGAAATGACCAGCCCAGACATGAAACCTGCTACCAGATTGCTTTGGCC
ATCAAGGACGAAGTCGAGGATCTTGAGAAGGCAGGCATTAACGTTATTCA
AATTGATGAGGCTGCCTTGAGGGAAGGATTGCCTCTTAGGAAATCTGAGC
ATGCTTTCTACTTGGACTGGGCAGTCCACTCCTTCAGAATCACCAACTGT
GGCGTCCAGGACACTACCCAGATCCACACCCACATGTGCTACTCCAACTT
CACGACATTATCCACTCATATCGACATGATGCTGATGTG
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