FC920677

Overview
NameFC920677
Unique NameFC920677
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length489
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15279 contig Ccv1_Contig15279:575..1063. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_VIBHB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=metE PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 2.749e-49
Identity = 91/153 (59.48%), Postives = 114/153 (74.51%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTL 460
            L+GF  T  GWVQSYGSRCVKP I+  D+ R K +TV WS+ AQS+T++ MKGMLTGPVTIL W+F R D  R E   Q+ALA++DEV DL+ +GIN+IQIDE A+REGLPL+K +H  YL WAV +F+I+    +  TQIHTHMCYS F  +
Sbjct:  503 LAGFQTTKFGWVQSYGSRCVKPAIVVADIEREKPITVEWSTYAQSLTSKQMKGMLTGPVTILCWTFPREDITRKEIAEQLALALRDEVSDLQDSGINIIQIDEPAIREGLPLKKRDHDAYLQWAVDAFKISAASAKPETQIHTHMCYSEFNEI 655          
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_PHOPR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Photobacterium profundum GN=metE PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 2.749e-49
Identity = 92/150 (61.33%), Postives = 113/150 (75.33%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNF 451
            L GFA T  GWVQSYGSRCVKP +I  D+ R K MTV W++ AQS+T + +KGMLTGPVTIL W+F R D PR     QIALA++DEV DL+ AGI +IQIDE A+REGLPL++S+   YLDWAV++F+I+    +  TQIHTHMCYS F
Sbjct:  505 LEGFAVTRFGWVQSYGSRCVKPAVIVSDIYRAKPMTVEWTTYAQSLTDKLVKGMLTGPVTILGWTFPREDLPRQGIANQIALALRDEVSDLQAAGIKIIQIDEPAIREGLPLKESQWQAYLDWAVNAFKISAASAEPQTQIHTHMCYSEF 654          
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_VIBFM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio fischeri (strain MJ11) GN=metE PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 3.590e-49
Identity = 89/153 (58.17%), Postives = 112/153 (73.20%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTL 460
            L+GF  T  GWVQSYGSRCVKP I+  D+ R   +TV W+  AQS+T + MKGMLTGPVTIL W+F R D  R E   Q+AL ++DEV DL++AGIN+IQIDE A+REGLP++KS+   YLDWAV +F+I+    +  TQIHTHMCYS F  +
Sbjct:  513 LNGFQATRFGWVQSYGSRCVKPAIVVADIEREAPITVSWTQYAQSLTTKQMKGMLTGPVTILGWTFPREDITRKEIAQQLALVLRDEVSDLQQAGINIIQIDEPAIREGLPIKKSDQKAYLDWAVEAFKISAASAKSETQIHTHMCYSEFNEI 665          
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_VIBF1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=metE PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 3.590e-49
Identity = 89/153 (58.17%), Postives = 112/153 (73.20%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTL 460
            L+GF  T  GWVQSYGSRCVKP I+  D+ R   +TV W+  AQS+T + MKGMLTGPVTIL W+F R D  R E   Q+AL ++DEV DL++AGIN+IQIDE A+REGLP++KS+   YLDWAV +F+I+    +  TQIHTHMCYS F  +
Sbjct:  513 LNGFQATRFGWVQSYGSRCVKPAIVVADIEREAPITVSWTQYAQSLTTKQMKGMLTGPVTILGWTFPREDITRKEIAQQLALVLRDEVSDLQQAGINIIQIDEPAIREGLPIKKSDQKAYLDWAVEAFKISAASAKSETQIHTHMCYSEFNEI 665          
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_BACSU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus subtilis GN=metE PE=1 SV=4)

HSP 1 Score: 192.586 bits (488), Expect = 7.998e-49
Identity = 93/150 (62.00%), Postives = 114/150 (76.00%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNF 451
            L+GFAFT   WVQSYGSRCV+PP+IYGDV   + MTV  +  AQS+T++ +KGMLTGPVTILNWSF RND  R E  +QI LA++ EV+ LE AGI +IQ+DE ALREGLPL+  +   YL WA  +FR+T   V++ TQIHTHMCYSNF
Sbjct:  502 LAGFAFTKYAWVQSYGSRCVRPPVIYGDVEFIEPMTVKDTVYAQSLTSKHVKGMLTGPVTILNWSFPRNDISRKEIAFQIGLALRKEVKALEDAGIQIIQVDEPALREGLPLKTRDWDEYLTWAAEAFRLTTSSVKNETQIHTHMCYSNF 651          
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_VIBHA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio harveyi GN=metE PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.045e-48
Identity = 91/153 (59.48%), Postives = 112/153 (73.20%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTL 460
            L+GF  T  GWVQSYGSRCVKP I+  D+ R K +TV WS+ AQS+T + MKGMLTGPVTIL W+F R D  R     Q+ALA++DEV DL++AGIN+IQIDE A+REGLPL+K +H  YL WAV +F+I     +  TQIHTHMCYS F  +
Sbjct:  503 LAGFQTTKFGWVQSYGSRCVKPAIVVADIEREKPITVEWSTYAQSLTNKQMKGMLTGPVTILCWTFPREDITRKAIADQLALALRDEVSDLQQAGINIIQIDEPAIREGLPLKKRDHKAYLQWAVDAFKIAAASAKPETQIHTHMCYSEFNEI 655          
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_AQUAE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Aquifex aeolicus GN=metE PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.045e-48
Identity = 96/160 (60.00%), Postives = 115/160 (71.88%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTLSTHIDMM 481
            L G A T +GWV SYGSR  +PPIIYGDVSRP  MT+   + AQS+T +P+KGMLTGPVTILNWS+ R D P+ E  YQIALA+ DEV+DLE AGI VIQIDE A REG PL+K +   Y DWAV +FR+ +   +  TQIHTHMCYS F  +  +I  M
Sbjct:  501 LDGIATTKHGWVLSYGSRVYRPPIIYGDVSRPAPMTLEEITYAQSLTNKPVKGMLTGPVTILNWSYYREDVPKREIAYQIALALLDEVKDLENAGIKVIQIDEPAFREGAPLKKRDWPEYFDWAVKAFRLAS-RAKPETQIHTHMCYSEFNEIIEYIYQM 659          
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_TRIEI (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Trichodesmium erythraeum (strain IMS101) GN=metE PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 3.039e-48
Identity = 88/160 (55.00%), Postives = 118/160 (73.75%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTLSTHIDMM 481
            L G+ FT +GWVQSYGSR V+PPII+GD+ RP AMT+    +AQS+T +P+KGMLTGPVT+LNWS+ R D  R E  +Q+ALAI++E++DLEKAG   IQ+DE A+REGLPL++     YL+WAV +FR++    +  TQ+HTHMCYS F  +   I  +
Sbjct:  489 LDGYTFTTHGWVQSYGSRYVRPPIIFGDIYRPHAMTIREFEVAQSLTEKPVKGMLTGPVTMLNWSYPRTDISRQEQAFQLALAIREELKDLEKAGAAFIQVDEPAMREGLPLKQQRWHEYLNWAVDAFRLSTAIARPETQVHTHMCYSEFGDIMESIKQL 648          
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_YEAST (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Saccharomyces cerevisiae GN=MET6 PE=1 SV=4)

HSP 1 Score: 190.274 bits (482), Expect = 3.969e-48
Identity = 91/150 (60.67%), Postives = 116/150 (77.33%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRK-SEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSN 448
            ++G+AFT NGWVQSYGSR V+PPII GD+SRPKAM+V  S  AQS+T++P+KGMLTGP+T L WSF R+D  +     Q+ALA++DEV DLE AGI VIQ+DE ALREGLPLR+ +E + Y  WA  +FR+   GV + TQIH+H CYS+
Sbjct:  511 INGYAFTVNGWVQSYGSRYVRPPIIVGDLSRPKAMSVKESVYAQSITSKPVKGMLTGPITCLRWSFPRDDVDQKTQAMQLALALRDEVNDLEAAGIKVIQVDEPALREGLPLREGTERSAYYTWAAEAFRVATSGVANKTQIHSHFCYSD 660          
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_BACA2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus amyloliquefaciens (strain FZB42) GN=metE PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 3.969e-48
Identity = 93/150 (62.00%), Postives = 112/150 (74.67%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNF 451
            L+GFAFT   WVQSYGSRCV+PP+I+GDV   + MTV  +  AQS+T + MKGMLTGPVTILNWSF R D  R E  +QI LA++ EV+ LE AGI +IQ+DE ALREGLPL+  +   YL WA  +FR+T   VQ+ TQIHTHMCYSNF
Sbjct:  502 LAGFAFTKYAWVQSYGSRCVRPPVIFGDVEFIEPMTVKDTVYAQSLTEKHMKGMLTGPVTILNWSFPRVDISRKEIAFQIGLALRKEVKALEDAGIQIIQVDEPALREGLPLKTQDWDEYLTWAAEAFRLTTSSVQNETQIHTHMCYSNF 651          
The following BLAST results are available for this feature:
BLAST of FC920677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 270
Match NameE-valueIdentityDescription
METE_VIBHB2.749e-4959.485-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PHOPR2.749e-4961.335-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBFM3.590e-4958.175-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBF13.590e-4958.175-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACSU7.998e-4962.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBHA1.045e-4859.485-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_AQUAE1.045e-4860.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_TRIEI3.039e-4855.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YEAST3.969e-4860.675-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACA23.969e-4862.005-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC32011F03EF RVDevelop1 Citrus clementina cDNA clone C32011F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920677 ID=FC920677; Name=FC920677; organism=Citrus clementina; type=EST; length=489bp
ATTATCAGGTTTCGCCTTCACTGCCAATGGGTGGGTGCAATCCTATGGAT
CTCGCTGTGTGAAGCCACCCATCATCTATGGTGATGTGAGCCGTCCCAAG
GCTATGACCGTCTTCTGGTCCTCCTTGGCTCAGAGCATGACAGCTCGCCC
AATGAAAGGAATGCTTACTGGCCCTGTCACCATTCTCAACTGGTCCTTTG
TTAGAAATGACCAGCCCAGACATGAAACCTGCTACCAGATTGCTTTGGCC
ATCAAGGACGAAGTCGAGGATCTTGAGAAGGCAGGCATTAACGTTATTCA
AATTGATGAGGCTGCCTTGAGGGAAGGATTGCCTCTTAGGAAATCTGAGC
ATGCTTTCTACTTGGACTGGGCAGTCCACTCCTTCAGAATCACCAACTGT
GGCGTCCAGGACACTACCCAGATCCACACCCACATGTGCTACTCCAACTT
CACGACATTATCCACTCATATCGACATGATGCTGATGTG
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