FC920677

Overview
NameFC920677
Unique NameFC920677
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length489
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15279 contig Ccv1_Contig15279:575..1063. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_STAES (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=metE PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 4.389e-47
Identity = 96/150 (64.00%), Postives = 108/150 (72.00%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNF 451
            L GF  T  GWVQSYGSR VKPP+IYGDV     +TV  +  AQS+T +P+KGMLTGPVTILNWSF R D PR     QIALAI +EV  LE+AGI VIQ+DE ALREGLPLR   H  YL+ AVHSF++    V D TQIHTHMCYS F
Sbjct:  487 LQGFLVTKFGWVQSYGSRAVKPPVIYGDVKWTAPLTVKETVYAQSLTDKPVKGMLTGPVTILNWSFERVDVPRKVVQDQIALAIDEEVLALEEAGIKVIQVDEPALREGLPLRSEYHEQYLEDAVHSFKLATSSVHDETQIHTHMCYSQF 636
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_STAEQ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=metE PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 4.389e-47
Identity = 96/150 (64.00%), Postives = 108/150 (72.00%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNF 451
            L GF  T  GWVQSYGSR VKPP+IYGDV     +TV  +  AQS+T +P+KGMLTGPVTILNWSF R D PR     QIALAI +EV  LE+AGI VIQ+DE ALREGLPLR   H  YL+ AVHSF++    V D TQIHTHMCYS F
Sbjct:  487 LQGFLVTKFGWVQSYGSRAVKPPVIYGDVKWTAPLTVKETVYAQSLTDKPVKGMLTGPVTILNWSFERVDVPRKVVQDQIALAIDEEVLALEEAGIKVIQVDEPALREGLPLRSEYHEQYLEDAVHSFKLATSSVHDETQIHTHMCYSQF 636
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_LISMF (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=metE PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 7.486e-47
Identity = 91/150 (60.67%), Postives = 114/150 (76.00%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNF 451
            L+GF  T  GWVQSYGSR V+PP+IYGDV+  + +TV  S  AQS+T RP+KGMLT PVTI+NWSFVR+D P      Q+ LA++ EVE LE+ GI VIQ+DE ALREGLPL+++    YLD AV+SF++T   VQ+ TQIHTHMCYS+F
Sbjct:  504 LAGFQATKFGWVQSYGSRAVRPPLIYGDVAFTEEITVKESVYAQSLTKRPVKGMLTAPVTIINWSFVRDDVPESVVANQVGLALRKEVEALERNGIKVIQVDEPALREGLPLKQARWQKYLDDAVYSFKLTTASVQNDTQIHTHMCYSDF 653
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_LISMC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=metE PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 7.486e-47
Identity = 91/150 (60.67%), Postives = 114/150 (76.00%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNF 451
            L+GF  T  GWVQSYGSR V+PP+IYGDV+  + +TV  S  AQS+T RP+KGMLT PVTI+NWSFVR+D P      Q+ LA++ EVE LE+ GI VIQ+DE ALREGLPL+++    YLD AV+SF++T   VQ+ TQIHTHMCYS+F
Sbjct:  504 LAGFQATKFGWVQSYGSRAVRPPLIYGDVAFTEEITVKESVYAQSLTKRPVKGMLTAPVTIINWSFVRDDVPESVVANQVGLALRKEVEALERNGIKVIQVDEPALREGLPLKQARWQKYLDDAVYSFKLTTASVQNDTQIHTHMCYSDF 653
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_LISIN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Listeria innocua GN=metE PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 7.486e-47
Identity = 91/150 (60.67%), Postives = 114/150 (76.00%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNF 451
            L+GF  T  GWVQSYGSR V+PP+IYGDV+  + +TV  S  AQS+T RP+KGMLT PVTI+NWSFVR+D P      Q+ LA++ EVE LE+ GI VIQ+DE ALREGLPL+++    YLD AV+SF++T   VQ+ TQIHTHMCYS+F
Sbjct:  504 LAGFQATKFGWVQSYGSRAVRPPLIYGDVAFTEEITVKESVYAQSLTKRPVKGMLTAPVTIINWSFVRDDVPESVVANQVGLALRKEVEALERNGIKVIQVDEPALREGLPLKQARWQKYLDDAVYSFKLTTASVQNDTQIHTHMCYSDF 653
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_STAHJ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=metE PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 1.277e-46
Identity = 96/150 (64.00%), Postives = 109/150 (72.67%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNF 451
            L GF  T  GWVQSYGSR VKPP+IYGDV   + +TV  +  AQS+T +P+KGMLTGPVTILNWSF R D PR     QIALAI +EV  LE+AGI VIQ+DE ALREGLPLR   H  YL  AV+SF++    VQD TQIHTHMCYS F
Sbjct:  487 LQGFLVTKFGWVQSYGSRAVKPPVIYGDVKWTEPLTVKETVYAQSLTDKPVKGMLTGPVTILNWSFERVDVPRKVVQDQIALAIDEEVLALEEAGIKVIQVDEPALREGLPLRSEYHEQYLADAVNSFKLATSSVQDETQIHTHMCYSQF 636
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_STRA5 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus agalactiae serotype V GN=metE PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 1.668e-46
Identity = 91/150 (60.67%), Postives = 114/150 (76.00%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNF 451
            L+GF  T  GWVQSYGSR VKPPIIYGDV   + +++  +  AQS+T +P+KGMLTGP+TI NWSF R+D  R +   QIALAIKDE++ LE++GI +IQ+DEAALREGLPLR+ +   YLD AV +F+I    V+D TQIHTHMCYS F
Sbjct:  487 LAGFTTTKLGWVQSYGSRAVKPPIIYGDVKHIQPLSLEETVYAQSLTKKPVKGMLTGPITITNWSFERDDISRSDLFNQIALAIKDEIQLLEQSGIAIIQVDEAALREGLPLRQQKQQAYLDDAVAAFKIATSSVKDETQIHTHMCYSKF 636
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_STRA3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus agalactiae serotype III GN=metE PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 1.668e-46
Identity = 91/150 (60.67%), Postives = 114/150 (76.00%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNF 451
            L+GF  T  GWVQSYGSR VKPPIIYGDV   + +++  +  AQS+T +P+KGMLTGP+TI NWSF R+D  R +   QIALAIKDE++ LE++GI +IQ+DEAALREGLPLR+ +   YLD AV +F+I    V+D TQIHTHMCYS F
Sbjct:  487 LAGFTTTKLGWVQSYGSRAVKPPIIYGDVKHIQPLSLEETVYAQSLTKKPVKGMLTGPITITNWSFERDDISRSDLFNQIALAIKDEIQLLEQSGIAIIQVDEAALREGLPLRQQKQQAYLDDAVAAFKIATSSVKDETQIHTHMCYSKF 636
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_STRA1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus agalactiae serotype Ia GN=metE PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 1.668e-46
Identity = 91/150 (60.67%), Postives = 114/150 (76.00%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNF 451
            L+GF  T  GWVQSYGSR VKPPIIYGDV   + +++  +  AQS+T +P+KGMLTGP+TI NWSF R+D  R +   QIALAIKDE++ LE++GI +IQ+DEAALREGLPLR+ +   YLD AV +F+I    V+D TQIHTHMCYS F
Sbjct:  487 LAGFTTTKLGWVQSYGSRAVKPPIIYGDVKHIQPLSLEETVYAQSLTKKPVKGMLTGPITITNWSFERDDISRSDLFNQIALAIKDEIQLLEQSGIAIIQVDEAALREGLPLRQQKQQAYLDDAVAAFKIATSSVKDETQIHTHMCYSKF 636
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_THESQ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Thermotoga sp. (strain RQ2) GN=metE PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 2.178e-46
Identity = 86/160 (53.75%), Postives = 116/160 (72.50%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTLSTHIDMM 481
            L+G A T NGWV SYGSRC +PPIIYG V+RP+ MT+   + AQS+T +P+KGMLTGPVTI++WS+ R D P  E  YQIALAI +EV+DLE+AGI ++QIDE A RE  P++KS+   Y +WA+++F +     +  TQIH HMCYS+F  +  +I  +
Sbjct:  476 LNGIATTQNGWVLSYGSRCYRPPIIYGTVTRPEPMTLKEITYAQSLTEKPVKGMLTGPVTIMSWSYYREDIPEREIAYQIALAINEEVKDLEEAGIKIVQIDEPAFREKAPIKKSKWPEYFEWAINAFNLA-ANARPETQIHAHMCYSDFNEIIEYIHQL 634
The following BLAST results are available for this feature:
BLAST of FC920677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 270
Match NameE-valueIdentityDescription
METE_STAES4.389e-4764.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAEQ4.389e-4764.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LISMF7.486e-4760.675-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LISMC7.486e-4760.675-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LISIN7.486e-4760.675-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAHJ1.277e-4664.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRA51.668e-4660.675-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRA31.668e-4660.675-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRA11.668e-4660.675-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_THESQ2.178e-4653.755-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC32011F03EF RVDevelop1 Citrus clementina cDNA clone C32011F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920677 ID=FC920677; Name=FC920677; organism=Citrus clementina; type=EST; length=489bp
ATTATCAGGTTTCGCCTTCACTGCCAATGGGTGGGTGCAATCCTATGGAT
CTCGCTGTGTGAAGCCACCCATCATCTATGGTGATGTGAGCCGTCCCAAG
GCTATGACCGTCTTCTGGTCCTCCTTGGCTCAGAGCATGACAGCTCGCCC
AATGAAAGGAATGCTTACTGGCCCTGTCACCATTCTCAACTGGTCCTTTG
TTAGAAATGACCAGCCCAGACATGAAACCTGCTACCAGATTGCTTTGGCC
ATCAAGGACGAAGTCGAGGATCTTGAGAAGGCAGGCATTAACGTTATTCA
AATTGATGAGGCTGCCTTGAGGGAAGGATTGCCTCTTAGGAAATCTGAGC
ATGCTTTCTACTTGGACTGGGCAGTCCACTCCTTCAGAATCACCAACTGT
GGCGTCCAGGACACTACCCAGATCCACACCCACATGTGCTACTCCAACTT
CACGACATTATCCACTCATATCGACATGATGCTGATGTG
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