FC920677

Overview
NameFC920677
Unique NameFC920677
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length489
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15279 contig Ccv1_Contig15279:575..1063. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_THEMA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Thermotoga maritima GN=metE PE=1 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 2.178e-46
Identity = 86/160 (53.75%), Postives = 116/160 (72.50%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTLSTHIDMM 481
            L+G A T NGWV SYGSRC +PPIIYG V+RP+ MT+   + AQS+T +P+KGMLTGPVTI++WS+ R D P  E  YQIALAI +EV+DLE+AGI ++QIDE A RE  P++KS+   Y +WA+++F +     +  TQIH HMCYS+F  +  +I  +
Sbjct:  476 LNGIATTQNGWVLSYGSRCYRPPIIYGTVTRPEPMTLKEITYAQSLTEKPVKGMLTGPVTIMSWSYYREDIPEREIAYQIALAINEEVKDLEEAGIKIVQIDEPAFREKAPIKKSKWPEYFEWAINAFNLA-ANARPETQIHAHMCYSDFNEIIEYIHQL 634
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_LISW6 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=metE PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 2.845e-46
Identity = 90/150 (60.00%), Postives = 114/150 (76.00%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNF 451
            L+GF  T  GWVQSYGSR V+PP+IYGDV+  + +TV  S  AQS+T RP+KGMLT PVTI+NWSFVR+D P      Q+ LA++ EVE LE+ GI VIQ+DE ALREGLPL+++    YL+ AV+SF++T   VQ+ TQIHTHMCYS+F
Sbjct:  504 LAGFQATKFGWVQSYGSRAVRPPLIYGDVAFTEEITVKESVYAQSLTKRPVKGMLTAPVTIINWSFVRDDVPESVVANQVGLALRKEVEALERNGIKVIQVDEPALREGLPLKQARWEKYLNDAVYSFKLTTASVQNDTQIHTHMCYSDF 653
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_LISMO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Listeria monocytogenes GN=metE PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 2.845e-46
Identity = 90/150 (60.00%), Postives = 114/150 (76.00%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNF 451
            L+GF  T  GWVQSYGSR V+PP+IYGDV+  + +TV  S  AQS+T RP+KGMLT PVTI+NWSFVR+D P      Q+ LA++ EVE LE+ GI VIQ+DE ALREGLPL+++    YL+ AV+SF++T   VQ+ TQIHTHMCYS+F
Sbjct:  504 LAGFQATKFGWVQSYGSRAVRPPLIYGDVAFTEEITVKESVYAQSLTKRPVKGMLTAPVTIINWSFVRDDVPESVVANQVGLALRKEVEALERNGIKVIQVDEPALREGLPLKQARWEKYLNDAVYSFKLTTASVQNDTQIHTHMCYSDF 653
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_STAAW (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain MW2) GN=metE PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.412e-45
Identity = 96/150 (64.00%), Postives = 106/150 (70.67%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNF 451
            L GF  T  GWVQSYGSR VKPPIIYGDV     +TV  +  AQS+T +P+KGMLTGPVTILNWSF R D PR     QIALAI +EV  LE AGI VIQ+DE ALREGLPLR   H  YL  AV SF++    V+D TQIHTHMCYS F
Sbjct:  487 LQGFLVTKFGWVQSYGSRAVKPPIIYGDVKWTAPLTVDETVYAQSLTDKPVKGMLTGPVTILNWSFERVDLPRKVVQDQIALAINEEVLALEAAGIKVIQVDEPALREGLPLRSEYHEQYLKDAVLSFKLATSSVRDETQIHTHMCYSQF 636
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_STAAT (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=metE PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.412e-45
Identity = 96/150 (64.00%), Postives = 106/150 (70.67%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNF 451
            L GF  T  GWVQSYGSR VKPPIIYGDV     +TV  +  AQS+T +P+KGMLTGPVTILNWSF R D PR     QIALAI +EV  LE AGI VIQ+DE ALREGLPLR   H  YL  AV SF++    V+D TQIHTHMCYS F
Sbjct:  487 LQGFLVTKFGWVQSYGSRAVKPPIIYGDVKWTAPLTVDETVYAQSLTDKPVKGMLTGPVTILNWSFERVDLPRKVVQDQIALAINEEVLALEAAGIKVIQVDEPALREGLPLRSEYHEQYLKDAVLSFKLATSSVRDETQIHTHMCYSQF 636
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_STAAS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain MSSA476) GN=metE PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.412e-45
Identity = 96/150 (64.00%), Postives = 106/150 (70.67%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNF 451
            L GF  T  GWVQSYGSR VKPPIIYGDV     +TV  +  AQS+T +P+KGMLTGPVTILNWSF R D PR     QIALAI +EV  LE AGI VIQ+DE ALREGLPLR   H  YL  AV SF++    V+D TQIHTHMCYS F
Sbjct:  487 LQGFLVTKFGWVQSYGSRAVKPPIIYGDVKWTAPLTVDETVYAQSLTDKPVKGMLTGPVTILNWSFERVDLPRKVVQDQIALAINEEVLALEAAGIKVIQVDEPALREGLPLRSEYHEQYLKDAVLSFKLATSSVRDETQIHTHMCYSQF 636
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_STAAR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain MRSA252) GN=metE PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.412e-45
Identity = 96/150 (64.00%), Postives = 106/150 (70.67%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNF 451
            L GF  T  GWVQSYGSR VKPPIIYGDV     +TV  +  AQS+T +P+KGMLTGPVTILNWSF R D PR     QIALAI +EV  LE AGI VIQ+DE ALREGLPLR   H  YL  AV SF++    V+D TQIHTHMCYS F
Sbjct:  487 LQGFLVTKFGWVQSYGSRAVKPPIIYGDVKWTAPLTVDETVYAQSLTDKPVKGMLTGPVTILNWSFERVDLPRKVVQDQIALAINEEVLALEAAGIKVIQVDEPALREGLPLRSEYHEQYLKDAVLSFKLATSSVRDETQIHTHMCYSQF 636
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_STAAN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain N315) GN=metE PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.412e-45
Identity = 96/150 (64.00%), Postives = 106/150 (70.67%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNF 451
            L GF  T  GWVQSYGSR VKPPIIYGDV     +TV  +  AQS+T +P+KGMLTGPVTILNWSF R D PR     QIALAI +EV  LE AGI VIQ+DE ALREGLPLR   H  YL  AV SF++    V+D TQIHTHMCYS F
Sbjct:  487 LQGFLVTKFGWVQSYGSRAVKPPIIYGDVKWTAPLTVDETVYAQSLTDKPVKGMLTGPVTILNWSFERVDLPRKVVQDQIALAINEEVLALEAAGIKVIQVDEPALREGLPLRSEYHEQYLKDAVLSFKLATSSVRDETQIHTHMCYSQF 636
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_STAAM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=metE PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.412e-45
Identity = 96/150 (64.00%), Postives = 106/150 (70.67%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNF 451
            L GF  T  GWVQSYGSR VKPPIIYGDV     +TV  +  AQS+T +P+KGMLTGPVTILNWSF R D PR     QIALAI +EV  LE AGI VIQ+DE ALREGLPLR   H  YL  AV SF++    V+D TQIHTHMCYS F
Sbjct:  487 LQGFLVTKFGWVQSYGSRAVKPPIIYGDVKWTAPLTVDETVYAQSLTDKPVKGMLTGPVTILNWSFERVDLPRKVVQDQIALAINEEVLALEAAGIKVIQVDEPALREGLPLRSEYHEQYLKDAVLSFKLATSSVRDETQIHTHMCYSQF 636
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_STAAE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain Newman) GN=metE PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.412e-45
Identity = 96/150 (64.00%), Postives = 106/150 (70.67%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNF 451
            L GF  T  GWVQSYGSR VKPPIIYGDV     +TV  +  AQS+T +P+KGMLTGPVTILNWSF R D PR     QIALAI +EV  LE AGI VIQ+DE ALREGLPLR   H  YL  AV SF++    V+D TQIHTHMCYS F
Sbjct:  487 LQGFLVTKFGWVQSYGSRAVKPPIIYGDVKWTAPLTVDETVYAQSLTDKPVKGMLTGPVTILNWSFERVDLPRKVVQDQIALAINEEVLALEAAGIKVIQVDEPALREGLPLRSEYHEQYLKDAVLSFKLATSSVRDETQIHTHMCYSQF 636
The following BLAST results are available for this feature:
BLAST of FC920677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 270
Match NameE-valueIdentityDescription
METE_THEMA2.178e-4653.755-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LISW62.845e-4660.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LISMO2.845e-4660.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAAW1.412e-4564.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAAT1.412e-4564.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAAS1.412e-4564.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAAR1.412e-4564.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAAN1.412e-4564.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAAM1.412e-4564.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAAE1.412e-4564.005-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC32011F03EF RVDevelop1 Citrus clementina cDNA clone C32011F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920677 ID=FC920677; Name=FC920677; organism=Citrus clementina; type=EST; length=489bp
ATTATCAGGTTTCGCCTTCACTGCCAATGGGTGGGTGCAATCCTATGGAT
CTCGCTGTGTGAAGCCACCCATCATCTATGGTGATGTGAGCCGTCCCAAG
GCTATGACCGTCTTCTGGTCCTCCTTGGCTCAGAGCATGACAGCTCGCCC
AATGAAAGGAATGCTTACTGGCCCTGTCACCATTCTCAACTGGTCCTTTG
TTAGAAATGACCAGCCCAGACATGAAACCTGCTACCAGATTGCTTTGGCC
ATCAAGGACGAAGTCGAGGATCTTGAGAAGGCAGGCATTAACGTTATTCA
AATTGATGAGGCTGCCTTGAGGGAAGGATTGCCTCTTAGGAAATCTGAGC
ATGCTTTCTACTTGGACTGGGCAGTCCACTCCTTCAGAATCACCAACTGT
GGCGTCCAGGACACTACCCAGATCCACACCCACATGTGCTACTCCAACTT
CACGACATTATCCACTCATATCGACATGATGCTGATGTG
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