FC920677

Overview
NameFC920677
Unique NameFC920677
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length489
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15279 contig Ccv1_Contig15279:575..1063. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_STAAC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain COL) GN=metE PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.412e-45
Identity = 96/150 (64.00%), Postives = 106/150 (70.67%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNF 451
            L GF  T  GWVQSYGSR VKPPIIYGDV     +TV  +  AQS+T +P+KGMLTGPVTILNWSF R D PR     QIALAI +EV  LE AGI VIQ+DE ALREGLPLR   H  YL  AV SF++    V+D TQIHTHMCYS F
Sbjct:  487 LQGFLVTKFGWVQSYGSRAVKPPIIYGDVKWTAPLTVDETVYAQSLTDKPVKGMLTGPVTILNWSFERVDLPRKVVQDQIALAINEEVLALEAAGIKVIQVDEPALREGLPLRSEYHEQYLKDAVLSFKLATSSVRDETQIHTHMCYSQF 636
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_STAAB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=metE PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.412e-45
Identity = 96/150 (64.00%), Postives = 106/150 (70.67%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNF 451
            L GF  T  GWVQSYGSR VKPPIIYGDV     +TV  +  AQS+T +P+KGMLTGPVTILNWSF R D PR     QIALAI +EV  LE AGI VIQ+DE ALREGLPLR   H  YL  AV SF++    V+D TQIHTHMCYS F
Sbjct:  487 LQGFLVTKFGWVQSYGSRAVKPPIIYGDVKWTAPLTVDETVYAQSLTDKPVKGMLTGPVTILNWSFERVDLPRKVVQDQIALAINEEVLALEAAGIKVIQVDEPALREGLPLRSEYHEQYLKDAVLSFKLATSSVRDETQIHTHMCYSQF 636
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_STAA9 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain JH9) GN=metE PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.412e-45
Identity = 96/150 (64.00%), Postives = 106/150 (70.67%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNF 451
            L GF  T  GWVQSYGSR VKPPIIYGDV     +TV  +  AQS+T +P+KGMLTGPVTILNWSF R D PR     QIALAI +EV  LE AGI VIQ+DE ALREGLPLR   H  YL  AV SF++    V+D TQIHTHMCYS F
Sbjct:  487 LQGFLVTKFGWVQSYGSRAVKPPIIYGDVKWTAPLTVDETVYAQSLTDKPVKGMLTGPVTILNWSFERVDLPRKVVQDQIALAINEEVLALEAAGIKVIQVDEPALREGLPLRSEYHEQYLKDAVLSFKLATSSVRDETQIHTHMCYSQF 636
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_STAA8 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain NCTC 8325) GN=metE PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.412e-45
Identity = 96/150 (64.00%), Postives = 106/150 (70.67%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNF 451
            L GF  T  GWVQSYGSR VKPPIIYGDV     +TV  +  AQS+T +P+KGMLTGPVTILNWSF R D PR     QIALAI +EV  LE AGI VIQ+DE ALREGLPLR   H  YL  AV SF++    V+D TQIHTHMCYS F
Sbjct:  487 LQGFLVTKFGWVQSYGSRAVKPPIIYGDVKWTAPLTVDETVYAQSLTDKPVKGMLTGPVTILNWSFERVDLPRKVVQDQIALAINEEVLALEAAGIKVIQVDEPALREGLPLRSEYHEQYLKDAVLSFKLATSSVRDETQIHTHMCYSQF 636
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_STAA3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain USA300) GN=metE PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.412e-45
Identity = 96/150 (64.00%), Postives = 106/150 (70.67%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNF 451
            L GF  T  GWVQSYGSR VKPPIIYGDV     +TV  +  AQS+T +P+KGMLTGPVTILNWSF R D PR     QIALAI +EV  LE AGI VIQ+DE ALREGLPLR   H  YL  AV SF++    V+D TQIHTHMCYS F
Sbjct:  487 LQGFLVTKFGWVQSYGSRAVKPPIIYGDVKWTAPLTVDETVYAQSLTDKPVKGMLTGPVTILNWSFERVDLPRKVVQDQIALAINEEVLALEAAGIKVIQVDEPALREGLPLRSEYHEQYLKDAVLSFKLATSSVRDETQIHTHMCYSQF 636
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_STAA2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain JH1) GN=metE PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.412e-45
Identity = 96/150 (64.00%), Postives = 106/150 (70.67%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNF 451
            L GF  T  GWVQSYGSR VKPPIIYGDV     +TV  +  AQS+T +P+KGMLTGPVTILNWSF R D PR     QIALAI +EV  LE AGI VIQ+DE ALREGLPLR   H  YL  AV SF++    V+D TQIHTHMCYS F
Sbjct:  487 LQGFLVTKFGWVQSYGSRAVKPPIIYGDVKWTAPLTVDETVYAQSLTDKPVKGMLTGPVTILNWSFERVDLPRKVVQDQIALAINEEVLALEAAGIKVIQVDEPALREGLPLRSEYHEQYLKDAVLSFKLATSSVRDETQIHTHMCYSQF 636
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_STAA1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=metE PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.412e-45
Identity = 96/150 (64.00%), Postives = 106/150 (70.67%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNF 451
            L GF  T  GWVQSYGSR VKPPIIYGDV     +TV  +  AQS+T +P+KGMLTGPVTILNWSF R D PR     QIALAI +EV  LE AGI VIQ+DE ALREGLPLR   H  YL  AV SF++    V+D TQIHTHMCYS F
Sbjct:  487 LQGFLVTKFGWVQSYGSRAVKPPIIYGDVKWTAPLTVDETVYAQSLTDKPVKGMLTGPVTILNWSFERVDLPRKVVQDQIALAINEEVLALEAAGIKVIQVDEPALREGLPLRSEYHEQYLKDAVLSFKLATSSVRDETQIHTHMCYSQF 636
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_THEP1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=metE PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 4.108e-45
Identity = 85/160 (53.12%), Postives = 113/160 (70.62%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTLSTHIDMM 481
            L+G A T NGWV SYGSRC +PPIIYG VSR   MT+   + AQS+T +P+KGMLTGP+TI+ WS+ R D P  E  YQIALAI +EV+DLE+AGI ++QIDE A RE  P++KS+   Y +WA+++F +     +  TQIH HMCYS+F  +  +I  +
Sbjct:  476 LNGIATTQNGWVLSYGSRCYRPPIIYGTVSRTGPMTLKEITYAQSLTEKPVKGMLTGPITIMGWSYYREDIPEREIAYQIALAINEEVKDLEEAGIKIVQIDEPAFREKAPVKKSKWPEYFEWAINAFNLA-ANARPETQIHAHMCYSDFNEIIEYIHQL 634
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_CHLRE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Chlamydomonas reinhardtii PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 8.296e-38
Identity = 78/160 (48.75%), Postives = 100/160 (62.50%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTLSTHIDMM 481
            L G  FT  GWVQSYGSRCV+PP++  D++     T +   +A    A+P+KG+LTGPVTILNWSF R D  R     Q+ LA++ EV  LE AG  +IQ+D+ ALREGLPL     A YL WAV +FR+        TQ+ TH+CYS+F  +   ID M
Sbjct:  512 LGGMLFTRAGWVQSYGSRCVRPPLVVDDITYRGPSTCWEYKVAIPTAAQPVKGLLTGPVTILNWSFPRKDISRAAQAMQLGLALRQEVAALEAAGCTIIQVDDPALREGLPLNGERWASYLSWAVDAFRLCTGVAAAGTQVVTHLCYSDFQDILPAIDRM 671
[Close]
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_SULAC (Probable methylcobalamin:homocysteine methyltransferase OS=Sulfolobus acidocaldarius GN=metE PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 2.687e-12
Identity = 46/161 (28.57%), Postives = 82/161 (50.93%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMT-ARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTLSTHIDMM 481
            LSGF F   G V+ +G    + P + G +     M +   + A+S++  + +K  +TGP TI  WS+    + + +  + +A  I  E+++L   GI VIQ+DE A+      RK +    ++WA+ S   +  GV    ++  H+CY  ++ L  H+D +
Sbjct:   80 LSGFKFY--GHVRVWGDHYYRKPSVTGKIKYNNPMLLDEVNFAKSVSYTQNLKVTITGPYTISEWSYNEYYKTQRDMAFDLAKVINQEIKNLVDIGIKVIQVDEPAIH----TRKED----VEWAIDSINESIKGV--NVKVVLHVCYGEYSYLEPHLDKL 228
The following BLAST results are available for this feature:
BLAST of FC920677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 270
Match NameE-valueIdentityDescription
METE_STAAC1.412e-4564.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAAB1.412e-4564.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAA91.412e-4564.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAA81.412e-4564.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAA31.412e-4564.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAA21.412e-4564.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAA11.412e-4564.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_THEP14.108e-4553.135-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CHLRE8.296e-3848.755-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SULAC2.687e-1228.57Probable methylcobalamin:homocysteine methyltransf... [more]

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Properties
Property NameValue
Genbank descriptionC32011F03EF RVDevelop1 Citrus clementina cDNA clone C32011F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920677 ID=FC920677; Name=FC920677; organism=Citrus clementina; type=EST; length=489bp
ATTATCAGGTTTCGCCTTCACTGCCAATGGGTGGGTGCAATCCTATGGAT
CTCGCTGTGTGAAGCCACCCATCATCTATGGTGATGTGAGCCGTCCCAAG
GCTATGACCGTCTTCTGGTCCTCCTTGGCTCAGAGCATGACAGCTCGCCC
AATGAAAGGAATGCTTACTGGCCCTGTCACCATTCTCAACTGGTCCTTTG
TTAGAAATGACCAGCCCAGACATGAAACCTGCTACCAGATTGCTTTGGCC
ATCAAGGACGAAGTCGAGGATCTTGAGAAGGCAGGCATTAACGTTATTCA
AATTGATGAGGCTGCCTTGAGGGAAGGATTGCCTCTTAGGAAATCTGAGC
ATGCTTTCTACTTGGACTGGGCAGTCCACTCCTTCAGAATCACCAACTGT
GGCGTCCAGGACACTACCCAGATCCACACCCACATGTGCTACTCCAACTT
CACGACATTATCCACTCATATCGACATGATGCTGATGTG
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