FC920677

Overview
NameFC920677
Unique NameFC920677
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length489
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15279 contig Ccv1_Contig15279:575..1063. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_MESSB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mesorhizobium sp. (strain BNC1) GN=metE PE=3 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 1.454e-58
Identity = 106/160 (66.25%), Postives = 126/160 (78.75%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTLSTHIDMM 481
            LSG+AFT  GWVQSYGSRCV+PPII+GDVSRP+ MTV W++ AQS+T +P+KGMLTGPVT+L WSFVR+D PR   C QIA A++DEV DLE AGI VIQIDE ALREGLPLR++E   YLDWAV  FR+ + GV+  TQIHTHMCY+ F  +   I  M
Sbjct:  514 LSGYAFTKQGWVQSYGSRCVRPPIIFGDVSRPQPMTVDWATYAQSLTDKPVKGMLTGPVTMLQWSFVRDDLPRETVCRQIAFALRDEVSDLEAAGIGVIQIDEPALREGLPLREAERPAYLDWAVECFRLASSGVKPETQIHTHMCYAEFNDIIDAIAAM 673          
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_RALEU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Ralstonia eutropha GN=metE PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 4.231e-58
Identity = 108/160 (67.50%), Postives = 127/160 (79.38%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTLSTHIDMM 481
            L G+ FT NGWVQSYGSRCVKPP+IYGDV RP+ MTV  +  AQS+T RPMKGMLTGP+T+L WSFVR+DQPR  T  Q+ALAI+DEV DLE+AGI VIQIDE ALREGLPLR+++   YLDWAV +FR++  GVQD TQIHTHMCY+ F  +   I  M
Sbjct:  499 LCGYGFTENGWVQSYGSRCVKPPVIYGDVYRPEPMTVDTARYAQSLTERPMKGMLTGPITMLQWSFVRDDQPRATTARQLALAIRDEVCDLEQAGIRVIQIDEPALREGLPLRRADWDAYLDWAVTAFRLSASGVQDQTQIHTHMCYAEFNDILPAIAAM 658          
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_RALEH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=metE PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 4.231e-58
Identity = 108/160 (67.50%), Postives = 127/160 (79.38%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTLSTHIDMM 481
            L G+ FT NGWVQSYGSRCVKPP+IYGDV RP+ MTV  +  AQS+T RPMKGMLTGP+T+L WSFVR+DQPR  T  Q+ALAI+DEV DLE+AGI VIQIDE ALREGLPLR+++   YLDWAV +FR++  GVQD TQIHTHMCY+ F  +   I  M
Sbjct:  499 LCGYGFTENGWVQSYGSRCVKPPVIYGDVYRPEPMTVDTARYAQSLTERPMKGMLTGPITMLQWSFVRDDQPRATTARQLALAIRDEVCDLEQAGIRVIQIDEPALREGLPLRRADWDAYLDWAVTAFRLSASGVQDQTQIHTHMCYAEFNDILPAIAAM 658          
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_SACD2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=metE PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 5.526e-58
Identity = 102/153 (66.67%), Postives = 124/153 (81.05%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTL 460
            L G+ FT  GWVQSYGSRCVKPPII+GDVSRP+ +TV W+  AQS+T++P+KGMLTGP+T+L WSFVR+DQPR  T  QIALA++ EV DLE AGI +IQ+DE ALREGLPLRK +   YLDWAV +F+I+  GV DTTQIHTHMCY+ F  +
Sbjct:  508 LDGYVFTQFGWVQSYGSRCVKPPIIFGDVSRPRKITVDWAEYAQSLTSKPVKGMLTGPITMLQWSFVRDDQPRKITAQQIALALRSEVNDLEAAGITIIQVDEPALREGLPLRKKDWQNYLDWAVEAFKISTAGVGDTTQIHTHMCYAEFNDI 660          
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_HAES1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Haemophilus somnus (strain 129Pt) GN=metE PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 7.217e-58
Identity = 106/153 (69.28%), Postives = 121/153 (79.08%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTL 460
            L GFAFT  GWVQSYGSRCVKPP+IYGDV RPKAMTV WS  AQS+T + MKGMLTGPVTIL WSFVRND PR   C QI +A+ DEV DLEKAGI VIQIDE A+REGLPL++++   YL WA  +FR+++ GV D TQIHTHMCYS F  +
Sbjct:  500 LDGFAFTKFGWVQSYGSRCVKPPVIYGDVVRPKAMTVRWSKYAQSLTKKVMKGMLTGPVTILQWSFVRNDIPRSTVCKQIGVALSDEVLDLEKAGIKVIQIDEPAIREGLPLKRADWDTYLQWAGEAFRLSSMGVADDTQIHTHMCYSEFNDI 652          
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_BURXL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia xenovorans (strain LB400) GN=metE PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 7.217e-58
Identity = 109/160 (68.12%), Postives = 125/160 (78.12%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTLSTHIDMM 481
            L G+AFT NGWVQSYGSRCVKPPIIYGDV RP+ MTV  +  AQS+T R MKGMLTGPVT+L WSFVR+DQPR  T  Q+ALAI+DEV DLEKAGI +IQIDE A REGLPLR+++ A YL+WA  +FRI+  GV D TQIHTHMCYS F  +   I  M
Sbjct:  498 LWGYAFTENGWVQSYGSRCVKPPIIYGDVYRPEPMTVETTRYAQSLTQRLMKGMLTGPVTMLQWSFVRDDQPRSTTALQLALAIRDEVVDLEKAGIRIIQIDEPAFREGLPLRRADWAAYLEWATRAFRISAAGVADQTQIHTHMCYSEFNDILPSIAAM 657          
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_HAEIN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Haemophilus influenzae GN=metE PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 2.100e-57
Identity = 105/153 (68.63%), Postives = 121/153 (79.08%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTL 460
            L GFAFT  GWVQSYGSRCVKPP+IYGDV+RP+ MTV WS  AQS+T R MKGMLTGPVTIL WSFVRND PR   C QI +A+ DEV DLE AGI VIQIDE A+REGLPL++++   YL WA  +FR+++ GVQD TQIHTHMCYS F  +
Sbjct:  499 LDGFAFTKFGWVQSYGSRCVKPPVIYGDVTRPEPMTVRWSQYAQSLTNRVMKGMLTGPVTILQWSFVRNDIPRSTVCKQIGVALSDEVLDLEAAGIKVIQIDEPAIREGLPLKRADWDAYLQWAGEAFRLSSMGVQDDTQIHTHMCYSEFNDI 651          
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_HAEIE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Haemophilus influenzae (strain PittEE) GN=metE PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 2.100e-57
Identity = 105/153 (68.63%), Postives = 121/153 (79.08%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTL 460
            L GFAFT  GWVQSYGSRCVKPP+IYGDV+RP+ MTV WS  AQS+T R MKGMLTGPVTIL WSFVRND PR   C QI +A+ DEV DLE AGI VIQIDE A+REGLPL++++   YL WA  +FR+++ GVQD TQIHTHMCYS F  +
Sbjct:  499 LDGFAFTKFGWVQSYGSRCVKPPVIYGDVTRPEPMTVRWSQYAQSLTNRVMKGMLTGPVTILQWSFVRNDIPRSTVCKQIGVALSDEVLDLEAAGIKVIQIDEPAIREGLPLKRADWDAYLQWAGEAFRLSSMGVQDDTQIHTHMCYSEFNDI 651          
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_BURPP (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=metE PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 2.100e-57
Identity = 109/160 (68.12%), Postives = 123/160 (76.88%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFTTLSTHIDMM 481
            L G+AFT NGWVQSYGSRCVKPPIIYGDV RP+ MTV  +  AQS+T R MKGMLTGPVT+L WSFVR+DQPR  T  Q+ALAI+DEV DLEKAGI +IQIDE A REGLPLR+ + A YL+WA   FRI+  GV D TQIHTHMCYS F  +   I  M
Sbjct:  498 LWGYAFTENGWVQSYGSRCVKPPIIYGDVYRPEPMTVETTRYAQSLTQRLMKGMLTGPVTMLQWSFVRDDQPRSTTALQLALAIRDEVVDLEKAGIRIIQIDEPAFREGLPLRRGDWAAYLEWATRVFRISAAGVADQTQIHTHMCYSEFNDILPSIAAM 657          
BLAST of FC920677 vs. ExPASy Swiss-Prot
Match: METE_BURTA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=metE PE=3 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 2.742e-57
Identity = 103/148 (69.59%), Postives = 120/148 (81.08%), Query Frame = 2
Query:    8 GFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNF 451
            GFA T+NGWVQSYGSRCVKPP++YGDV  P+ MTV W+S AQS+T +P+KGMLTGPVT+L WSFVR+DQPR  T  QIALA++ E  DLEKAGI +IQ+DE ALREGLPL+  + A YLDWAV +FRI   GV D TQIHTHMCYS F
Sbjct:  504 GFAITSNGWVQSYGSRCVKPPLVYGDVYLPEPMTVGWASYAQSLTTKPVKGMLTGPVTMLQWSFVRDDQPRATTALQIALALRQETLDLEKAGIGMIQVDEPALREGLPLKARDRAEYLDWAVRAFRIAASGVADDTQIHTHMCYSEF 651          
The following BLAST results are available for this feature:
BLAST of FC920677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 270
Match NameE-valueIdentityDescription
METE_MESSB1.454e-5866.255-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RALEU4.231e-5867.505-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RALEH4.231e-5867.505-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SACD25.526e-5866.675-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_HAES17.217e-5869.285-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURXL7.217e-5868.135-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_HAEIN2.100e-5768.635-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_HAEIE2.100e-5768.635-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURPP2.100e-5768.135-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURTA2.742e-5769.595-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC32011F03EF RVDevelop1 Citrus clementina cDNA clone C32011F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920677 ID=FC920677; Name=FC920677; organism=Citrus clementina; type=EST; length=489bp
ATTATCAGGTTTCGCCTTCACTGCCAATGGGTGGGTGCAATCCTATGGAT
CTCGCTGTGTGAAGCCACCCATCATCTATGGTGATGTGAGCCGTCCCAAG
GCTATGACCGTCTTCTGGTCCTCCTTGGCTCAGAGCATGACAGCTCGCCC
AATGAAAGGAATGCTTACTGGCCCTGTCACCATTCTCAACTGGTCCTTTG
TTAGAAATGACCAGCCCAGACATGAAACCTGCTACCAGATTGCTTTGGCC
ATCAAGGACGAAGTCGAGGATCTTGAGAAGGCAGGCATTAACGTTATTCA
AATTGATGAGGCTGCCTTGAGGGAAGGATTGCCTCTTAGGAAATCTGAGC
ATGCTTTCTACTTGGACTGGGCAGTCCACTCCTTCAGAATCACCAACTGT
GGCGTCCAGGACACTACCCAGATCCACACCCACATGTGCTACTCCAACTT
CACGACATTATCCACTCATATCGACATGATGCTGATGTG
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