FC920680
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920680 vs. ExPASy Swiss-Prot
Match: IF2G_NATPD (Translation initiation factor 2 subunit gamma OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=eIF2G PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.098e-26 Identity = 67/145 (46.21%), Postives = 91/145 (62.76%), Query Frame = 3 Query: 246 RQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCED-DRCPRPMCYKAYGSGKEDNPLCDVPGFENCRMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPPTSEHLAAVEIM 677 RQ +NIG +GHV HGK+T+V+++SG T + E++R I+I+LGYA+A +C + D R + G E L R VSFVD PGH+ LMATML+GAAIMDGA+L+IAANE P+ T EHL A++I+ Sbjct: 6 RQPEVNIGLVGHVDHGKTTLVESLSGEWTDQHSEEMKRGISIRLGYADATFRECPELDEPDRYTVEETCPDGSESEHL--------------RTVSFVDAPGHETLMATMLSGAAIMDGAVLVIAANEPVPRAQTEEHLMALDII 136
BLAST of FC920680 vs. ExPASy Swiss-Prot
Match: IF2G_HALLT (Translation initiation factor 2 subunit gamma OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=eIF2G PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.873e-26 Identity = 64/149 (42.95%), Postives = 92/149 (61.74%), Query Frame = 3 Query: 240 ISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCEDDRCPRPMCY---KAYGSGKEDNPLCDVPGFENCRMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPPTSEHLAAVEIM 677 ++ Q +NIG +GHV HGK+T+V+A+SG T + E++R I+I+LGYA+A +C P CY + G E P+ R VSFVD PGH+ LMATML+GA+IMDGA+L+++A E PQ T EHL A++++ Sbjct: 4 VNTQPEVNIGLVGHVDHGKTTLVQALSGSWTDQHSEEMKRGISIRLGYADATFRRCPGVDAPE--CYTVDEECEDGSESEPI--------------RTVSFVDAPGHETLMATMLSGASIMDGAVLVVSATEDVPQAQTEEHLMALDLI 136
BLAST of FC920680 vs. ExPASy Swiss-Prot
Match: IF2G_HALWD (Translation initiation factor 2 subunit gamma OS=Haloquadratum walsbyi (strain DSM 16790) GN=eIF2G PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.295e-26 Identity = 64/145 (44.14%), Postives = 91/145 (62.76%), Query Frame = 3 Query: 243 SRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCEDDRCPRPMCYKAYGSGKEDNPLCDVPGFENCRMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPPTSEHLAAVEIM 677 ++Q +NIG +GHV HGK+T+V+A+SG T + E++R I+I+LGYA+A + P Y +G + P + LR VSFVD PGH+ LMATML+GAAIMDGA+L+++A E PQ T EHL A++I+ Sbjct: 5 TQQPEVNIGLVGHVDHGKTTLVQALSGSWTDQHSEEMKRGISIRLGYADATFRMISNINPPEG--YTVDETGPDGEPT-----------ETLRTVSFVDAPGHETLMATMLSGAAIMDGAVLVVSATEDVPQAQTEEHLMALDII 136
BLAST of FC920680 vs. ExPASy Swiss-Prot
Match: SUV39_DROPS (Histone-lysine N-methyltransferase Su(var)3-9 OS=Drosophila pseudoobscura pseudoobscura GN=Su(var)3-9 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.586e-25 Identity = 61/78 (78.21%), Postives = 66/78 (84.62%), Query Frame = 3 Query: 171 KGLMEQDLSKLDVTKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYK 404 + L +QDL L+V+ L PLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKL + K K Sbjct: 12 RNLQKQDLRNLEVSNLTPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLERLSEKKIK 89
BLAST of FC920680 vs. ExPASy Swiss-Prot
Match: SELB_MOOTH (Selenocysteine-specific elongation factor OS=Moorella thermoacetica GN=selB PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.290e-13 Identity = 49/142 (34.51%), Postives = 70/142 (49.30%), Query Frame = 3 Query: 258 INIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCEDDRCPRPMCYKAYGSGKEDNPLCDVPGFENCRMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPPTSEHLAAVEIMRL 683 I +GT GHV HGK+ +VKA++GV T R K E ER I+I+LG+A PL G R + VD PGH+ + ML G MD +L++AA+E P T EHLA ++++++ Sbjct: 4 IVVGTAGHVDHGKTVLVKALTGVDTDRLKEEKERGISIELGFA----------------------------PLTLPSG---------RQLGLVDVPGHERFIRQMLAGVGGMDLVMLVVAADEGV-MPQTREHLAIIDLLQI 107
BLAST of FC920680 vs. ExPASy Swiss-Prot
Match: EFTU_MYCHJ (Elongation factor Tu OS=Mycoplasma hyopneumoniae (strain J / ATCC 25934 / NCTC 10110) GN=tuf PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.639e-12 Identity = 51/134 (38.06%), Postives = 63/134 (47.01%), Query Frame = 3 Query: 258 INIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCEDDRCPRPMCYKAYGSGKEDNPLCDVPGFENCRMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPPTSEHL 659 INIGTIGHV HGK+T+ AIS + K G A AK Y D A K + E K RH + VDCPGH + M+ GAA MDGA+L++AA + P P T EH+ Sbjct: 19 INIGTIGHVDHGKTTLTAAIS-------------TVLAKRGLAEAKDYASID----------AAPEEKARGITINTAHIEYSTDK--RHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDG-PMPQTREHI 126
BLAST of FC920680 vs. ExPASy Swiss-Prot
Match: EFTU_MYCH7 (Elongation factor Tu OS=Mycoplasma hyopneumoniae (strain 7448) GN=tuf PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.639e-12 Identity = 51/134 (38.06%), Postives = 63/134 (47.01%), Query Frame = 3 Query: 258 INIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCEDDRCPRPMCYKAYGSGKEDNPLCDVPGFENCRMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPPTSEHL 659 INIGTIGHV HGK+T+ AIS + K G A AK Y D A K + E K RH + VDCPGH + M+ GAA MDGA+L++AA + P P T EH+ Sbjct: 19 INIGTIGHVDHGKTTLTAAIS-------------TVLAKKGLAEAKDYASID----------AAPEEKARGITINTAHIEYSTDK--RHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDG-PMPQTREHI 126
BLAST of FC920680 vs. ExPASy Swiss-Prot
Match: EFTU_MYCH2 (Elongation factor Tu OS=Mycoplasma hyopneumoniae (strain 232) GN=tuf PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.639e-12 Identity = 51/134 (38.06%), Postives = 63/134 (47.01%), Query Frame = 3 Query: 258 INIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCEDDRCPRPMCYKAYGSGKEDNPLCDVPGFENCRMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPPTSEHL 659 INIGTIGHV HGK+T+ AIS + K G A AK Y D A K + E K RH + VDCPGH + M+ GAA MDGA+L++AA + P P T EH+ Sbjct: 19 INIGTIGHVDHGKTTLTAAIS-------------TVLAKKGLAEAKDYASID----------AAPEEKARGITINTAHIEYSTDK--RHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDG-PMPQTREHI 126
BLAST of FC920680 vs. ExPASy Swiss-Prot
Match: EFTU_FLAFE (Elongation factor Tu OS=Flavobacterium ferrugineum GN=tuf PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.977e-12 Identity = 51/134 (38.06%), Postives = 66/134 (49.25%), Query Frame = 3 Query: 258 INIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCEDDRCPRPMCYKAYGSGKEDNPLCDVPGFENCRMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPPTSEHL 659 +NIGTIGHV HGK+T+ AI+ +I K G A AK Y E D P KE + E RH + VDCPGH + M+ GAA MDGA+L++AA++ P P T EH+ Sbjct: 13 VNIGTIGHVDHGKTTLTAAIT-------------DILSKKGLAQAKKYD-EIDGAPEE---------KERGITINTAHVEYETAN--RHYAHVDCPGHADYVKNMITGAAQMDGAILVVAASDG-PMPQTKEHI 120
BLAST of FC920680 vs. ExPASy Swiss-Prot
Match: EFTU_TOXGO (Elongation factor Tu, apicoplast OS=Toxoplasma gondii GN=tufA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.223e-11 Identity = 52/149 (34.90%), Postives = 72/149 (48.32%), Query Frame = 3 Query: 225 LSPEVISRQAT-INIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYK---CEDDRCPRPMCYKAYGSGKEDNPLCDVPGFENCRMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPPTSEHL 659 ++ E+ +Q INIGTIGHV HGK+T+ AI+ V L +N KL K YK C + R + K E +RH + +DCPGH + M+ GAA MDGA+L+++A + P P T EHL Sbjct: 1 MAKEIFKKQKPHINIGTIGHVDHGKTTLTAAITYV--------LAKNNQAKL-----KTYKEIDCAPEEIARGITIKTSHIEYET---------------AVRHYAHIDCPGHADYIKNMITGAAQMDGAILVVSAVDG-PMPQTKEHL 120 The following BLAST results are available for this feature:
BLAST of FC920680 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920680 ID=FC920680; Name=FC920680; organism=Citrus clementina; type=EST; length=701bpback to top |