FC920688
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920688 vs. ExPASy Swiss-Prot
Match: NIPA1_HUMAN (Magnesium transporter NIPA1 OS=Homo sapiens GN=NIPA1 PE=1 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.844e-38 Identity = 83/219 (37.90%), Postives = 132/219 (60.27%), Query Frame = 2 Query: 2 TPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSLTVMSVKAIGIAIKLTLE---GLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTRE 649 TPLGAL + ++LA ++L EKL +G LGCLL GS ++++H+P ES+ + E+ T P F+ Y+ V+ + L+LI + AP +G TNI++YI ICS++GS TV S K IG+A + L +A C+ + A++ + +I Q Y+N AL+ F+++V IYY +FT+ + ASAI+F+++S CGF TV G ++ +E Sbjct: 96 TPLGALGVPFGSILASYLLKEKLNILGKLGCLLSCAGSVVLIIHSPKSESVTTQAELEEKLTNPVFVGYLCIVLLMLLLLIFWIAPAHGPTNIMVYISICSLLGSFTVPSTKGIGLAAQDILHNNPSSQRALCLCLVLLAVLGCS-IIVQFRYINKALECFDSSVFGAIYYVVFTTLVLLASAILFREWSNVGLVDFLGMACGFTTVSVGIVLIQVFKE 313
BLAST of FC920688 vs. ExPASy Swiss-Prot
Match: NPAL2_MOUSE (NIPA-like protein 2 OS=Mus musculus GN=Nipal2 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.269e-18 Identity = 58/217 (26.73%), Postives = 107/217 (49.31%), Query Frame = 2 Query: 5 PLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTREPD 655 PLG +S+ SA+++ L E L+ +LG L G+ ++V AP S + + FL+YV + V +L LY R G +I++ + + +++ SLTV+SVKA+ I L++ G Q +I ++ + + Q+ +LN A + + V P+ + FT+ I A I ++++ G + ++ L G G ++ RE + Sbjct: 118 PLGCMSVTGSAIISVLFLKENLRASDLLGMTLAFAGTYLLVNFAPNITQAISARTVQYYFVGWQFLVYVILEILVFCIL-LYFHKRKGMKHIVVLLTLVALLASLTVISVKAVSGMITLSVTGKMQLTYAIFYIMLVIMIASCVFQVKFLNQATELYTMTTVVPVNHVFFTTSAIIAGIIFYQEFLGAAFLTVFIYLFGCFLSFLGVFLVTRNREKE 333
BLAST of FC920688 vs. ExPASy Swiss-Prot
Match: NPAL2_HUMAN (NIPA-like protein 2 OS=Homo sapiens GN=NIPAL2 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.995e-16 Identity = 56/217 (25.81%), Postives = 104/217 (47.93%), Query Frame = 2 Query: 5 PLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTREPD 655 PLG +S+ SA+++ L + L+ +LG L G+ ++V AP S + + FL+YV + + +L LY R G +++I + + +++ SLTV+SVKA+ I ++ Q +I ++ + + Q+ +LN A +NT V P+ + FT I A I ++++ G ++ L G G ++ RE + Sbjct: 118 PLGCVSVTGSAIISVTFLKDNLRASDLLGTTLAFAGTYLLVNFAPNITQAISARTVQYYLVGWQFLIYVILEILIFCIL-LYFYKRKGMKHMVILLTLVAILASLTVISVKAVSGMITFSVMDKMQLTYPIFYIMFIIMIASCVFQVKFLNQATKLYNTTTVVPVNHIFFTISAIIAGIIFYQEFLGAPFLTVFIYLFGCFLSFLGVFLVTRNREKE 333
BLAST of FC920688 vs. ExPASy Swiss-Prot
Match: NPAL3_HUMAN (NIPA-like protein 3 OS=Homo sapiens GN=NIPAL3 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.815e-16 Identity = 54/227 (23.79%), Postives = 110/227 (48.46%), Query Frame = 2 Query: 5 PLGALSIIVSAVLAHFMLNEKLQK--------MGMLGCLLCVVGSTMIVLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTREPDTP 661 PL A+S+I SA++ + EK + + +GC L VVG+ ++V AP + + + FLLY+ V + L+LY NI++ + + +++GS+TV++VKA+ + L+++G Q ++ + + + Q +L+ A +++++++ + Y + T+ I A AI + D+ G+ I G + G ++ R+ P Sbjct: 104 PLSAVSVIASAIIGIIFIKEKWKPKDFLRRYVLSFVGCGLAVVGTYLLVTFAPNSHEKMTGENVTRHLVSWPFLLYM-LVEIILFCLLLYFYKEKNANNIVVILLLVALLGSMTVVTVKAVAGMLVLSIQGNLQLDYPIFYVMFVCMVATAVYQAAFLSQASQMYDSSLIASVGYILSTTIAITAGAIFYLDFIGEDVLHICMFALGCLIAFLGVFLITRNRKKPIP 329
BLAST of FC920688 vs. ExPASy Swiss-Prot
Match: NPAL3_PONAB (NIPA-like protein 3 OS=Pongo abelii GN=NIPAL3 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.901e-16 Identity = 54/227 (23.79%), Postives = 110/227 (48.46%), Query Frame = 2 Query: 5 PLGALSIIVSAVLAHFMLNEKLQK--------MGMLGCLLCVVGSTMIVLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTREPDTP 661 PL A+S+I SA++ + EK + + +GC L VVG+ ++V AP + + + FLLY+ V + L+LY NI++ + + +++GS+TV++VKA+ + L+++G Q ++ + + + Q +L+ A +++++++ + Y + T+ I A AI + D+ G+ I G + G ++ R+ P Sbjct: 104 PLSAVSVIASAIIGIIFIKEKWKPKDFLRRYILSFVGCGLAVVGTYLLVTFAPNSREKMTGENVTRHLVSWPFLLYM-LVEIILFCLLLYFYKEKNANNIVVILLLVALLGSMTVVTVKAVAGMLVLSIQGNLQLDYPIFYVMFVCMVATAVYQAAFLSQASQMYDSSLIASVGYILSTTIAITAGAIFYLDFIGEDVLHICMFALGCLIAFLGVFLITRNRKKAIP 329
BLAST of FC920688 vs. ExPASy Swiss-Prot
Match: NPAL3_MOUSE (NIPA-like protein 3 OS=Mus musculus GN=Nipal3 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.901e-16 Identity = 56/227 (24.67%), Postives = 111/227 (48.90%), Query Frame = 2 Query: 5 PLGALSIIVSAVLAHFMLNEKLQK--------MGMLGCLLCVVGSTMIVLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTREPDTP 661 PL A+S+I SA++ + EK + + +GC L +VG+ ++V AP + + I FLLY+ V V L+LY +I++ + + +++GS+TV++VKA+ + L+++G Q ++ + + I Q +L+ A +++++++ + Y + T+ I A AI + D+ G+ A I G + G ++ R+ P Sbjct: 108 PLSAVSVIASAIIGIIFIKEKWKPKDFVRRYVLSFVGCGLAIVGTYLLVTFAPNSHEKMTGENIARHLVSWPFLLYM-LVAIVLFCLLLYFYKERNANSIVVILLLVALLGSMTVVTVKAVSGMLVLSIQGNLQLDYPIFYVMFVCMVATAIYQATFLSEASQIYDSSLIASVGYILSTTAAITAGAIFYLDFLGEEALHICMFALGCLIAFLGVFLITRNRKKAIP 333 The following BLAST results are available for this feature:
BLAST of FC920688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920688 ID=FC920688; Name=FC920688; organism=Citrus clementina; type=EST; length=713bpback to top |