FC920691

Overview
NameFC920691
Unique NameFC920691
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length720
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: CHS2_CITSI (Chalcone synthase 2 OS=Citrus sinensis GN=CHS2 PE=2 SV=1)

HSP 1 Score: 312.768 bits (800), Expect = 1.207e-84
Identity = 149/228 (65.35%), Postives = 186/228 (81.58%), Query Frame = 1
Query:   37 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            M  V++ +N Q+  G AT+LAIGTA P + + QADYPDYYFR+T S+HMT LK+KFKR+C+KS +KKRY ++TE+ILK+NPN+CAY   SLD+RQDI+V EVPKLG+EAATKAIKEWGQ KS+ITHLIFC+  GVDMPGADYQLTK++GL PSVKR M+Y QGC+ G T +R+AKD AENN G RVLVVCS+++  TFRGP+D +L  L GQA     AAA+I+GA+P
Sbjct:    1 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAAVIVGADP 228          
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: CHS5_SOYBN (Chalcone synthase 5 OS=Glycine max GN=CHS5 PE=3 SV=1)

HSP 1 Score: 312.383 bits (799), Expect = 1.576e-84
Identity = 146/228 (64.04%), Postives = 186/228 (81.58%), Query Frame = 1
Query:   37 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            M  V++ +  Q+  G AT++AIGTA PPNC+ Q+ YPDYYFR+TNS+HMT LK+KFKR+C+KS +KKRY ++ E+ILK+NP++CAY   SLD+RQD++V EVPKLG+EAATKAIKEWGQ KS+ITHLIFC+  GVDMPGADYQLTK+LGL PSVKR M+Y QGC+ G T +R+AKD AENN G RVLVVCS+++  TFRGP+D +L  L GQA     AAA+I+G++P
Sbjct:    1 MVSVEEIRQAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMYLNEEILKENPSVCAYMAPSLDARQDMVVMEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPTDTHLDSLVGQALFGDGAAAVIVGSDP 228          
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: CHS2_SOYBN (Chalcone synthase 2 OS=Glycine max GN=CHS2 PE=3 SV=1)

HSP 1 Score: 312.383 bits (799), Expect = 1.576e-84
Identity = 146/228 (64.04%), Postives = 186/228 (81.58%), Query Frame = 1
Query:   37 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            M  V++ +  Q+  G AT++AIGTA PPNC+ Q+ YPDYYFR+TNS+HMT LK+KFKR+C+KS +KKRY ++ E+ILK+NP++CAY   SLD+RQD++V EVPKLG+EAATKAIKEWGQ KS+ITHLIFC+  GVDMPGADYQLTK+LGL PSVKR M+Y QGC+ G T +R+AKD AENN G RVLVVCS+++  TFRGP+D +L  L GQA     AAA+I+G++P
Sbjct:    1 MVSVEEIRKAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMYLNEEILKENPSVCAYMAPSLDARQDMVVMEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPTDTHLDSLVGQALFGDGAAAVIVGSDP 228          
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: CHSY_VIGUN (Chalcone synthase OS=Vigna unguiculata GN=CHS PE=2 SV=1)

HSP 1 Score: 311.997 bits (798), Expect = 2.059e-84
Identity = 149/228 (65.35%), Postives = 184/228 (80.70%), Query Frame = 1
Query:   37 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            M  V + +  Q+  G ATILAIGTA PPNC+ Q+ YPDYYFR+TNS+HMT LK+KF+R+C+KS +KKRY HVTE+ILK+NP++CAY   SLD+RQDI+V EVP+LG+EAA KAIKEWGQ KS+ITHLIFC+  GVDMPGADYQLTK+LGL P VKR M+Y QGC+ G T +R+AKD AENN G RVLVVCS+++  TFRGPSD +L  L GQA     AAA+I+G++P
Sbjct:    1 MVSVSEIRQAQRAEGPATILAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFQRMCDKSMIKKRYMHVTEEILKENPSMCAYMAPSLDARQDIVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIVGSDP 228          
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: CHSY_CARAN (Chalcone synthase OS=Cardamine amara GN=CHS PE=3 SV=1)

HSP 1 Score: 311.612 bits (797), Expect = 2.689e-84
Identity = 148/221 (66.97%), Postives = 182/221 (82.35%), Query Frame = 1
Query:   58 KNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            +  Q+  G A ILAIGTANP N + QA+YPDYYFR+TNS+HMT LK+KFKR+C+KS ++KR+ HVTE+ LK+NPN+CAY   SLD+RQDI+V EVPKLG+EAA KAIKEWGQ KS+ITHL+FC+  GVDMPGADYQLTK+LGL PSVKR+M+Y QGC+ G T +R+AKD AENN G RVLVVCS+++  TFRGPSD +L  L GQA  S  AAALI+G++P
Sbjct:   13 RKAQRADGPAGILAIGTANPANYVIQAEYPDYYFRITNSEHMTDLKEKFKRMCDKSTIRKRHMHVTEEFLKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFSDGAAALIVGSDP 233          
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: CHS6_SOYBN (Chalcone synthase 6 OS=Glycine max GN=CHS6 PE=3 SV=1)

HSP 1 Score: 311.612 bits (797), Expect = 2.689e-84
Identity = 147/228 (64.47%), Postives = 185/228 (81.14%), Query Frame = 1
Query:   37 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            M  V++ +  Q+  G AT++AIGTA PPNC+ Q+ YPDYYFR+TNSDHM  LK+KFKR+C+KS +KKRY ++ E+ILK+NP++CAY   SLD+RQD++V EVPKLG+EAATKAIKEWGQ KS+ITHLIFC+  GVDMPGADYQLTK+LGL PSVKR M+Y QGC+ G T +R+AKD AENN G RVLVVCS+++  TFRGPSD +L  L GQA     AAA+I+G++P
Sbjct:    1 MVSVEEIRKAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSDHMNELKEKFKRMCDKSMIKKRYMYLNEEILKENPSVCAYMEPSLDARQDMVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRYMMYQQGCFAGGTVLRLAKDLAENNTGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIVGSDP 228          
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: CHS1_SOYBN (Chalcone synthase 1 OS=Glycine max GN=CHS1 PE=3 SV=1)

HSP 1 Score: 311.612 bits (797), Expect = 2.689e-84
Identity = 146/228 (64.04%), Postives = 186/228 (81.58%), Query Frame = 1
Query:   37 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            M  V++ +  Q+  G AT++AIGTA PPNC+ Q+ YPDYYFR+TNS+HMT LK+KFKR+C+KS +KKRY ++ E+ILK+NP++CAY   SLD+RQD++V EVPKLG+EAATKAIKEWGQ KS+ITHLIFC+  GVDMPGADYQLTK+LGL PSVKR M+Y QGC+ G T +R+AKD AENN G RVLVVCS+++  TFRGP+D +L  L GQA     AAA+I+G++P
Sbjct:    1 MVSVEEIRKAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMYLNEEILKENPSVCAYMAPSLDARQDMVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPTDTHLDSLVGQALFGDGAAAVIVGSDP 228          
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: CHSE_IPOPU (Chalcone synthase E OS=Ipomoea purpurea GN=CHSE PE=2 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 3.512e-84
Identity = 150/228 (65.79%), Postives = 184/228 (80.70%), Query Frame = 1
Query:   37 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            M  V++ +  Q+  G ATI+AIGT+ P NC+ Q+ YPDYYFR+TNS+H+  LK+KFKR+CEKS +KKRY ++TE+IL +NPNICAY   SLD+RQDI+V EVPKLG+EAA KAIKEWGQ KS+ITHL+FC+  GVDMPGADYQLTK+LGL PSVKR M+Y QGC+ G T IR+AKD AENN G RVLVVCS+++  TFRGPSDA+L  L GQA     AAALIIG++P
Sbjct:    1 MVTVEEVRKAQRAQGPATIMAIGTSTPQNCVDQSTYPDYYFRITNSEHLVELKEKFKRMCEKSMIKKRYMYLTEEILTENPNICAYMAPSLDARQDIVVVEVPKLGKEAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLQPSVKRFMMYQQGCFAGGTVIRLAKDLAENNKGARVLVVCSEITAVTFRGPSDAHLDSLVGQALFGDGAAALIIGSDP 228          
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: CHSY_CATRO (Chalcone synthase OS=Catharanthus roseus GN=CHS PE=2 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 4.586e-84
Identity = 147/228 (64.47%), Postives = 187/228 (82.02%), Query Frame = 1
Query:   37 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            M  V++ +N Q+  G AT+LAIGT+ P NC+ Q+ YPDYYFR+TNS+H T LK+KFKR+CEKS +KKRY H+TE+IL++NPNICAY   SLD+RQ+I+V EVPKLG+EAA KAIKEWGQSKS+ITHL+FC+  GVDMPGADYQLTK+LGL  SVKR+M+Y QGC+ G T +R+AKD AENN G RVLVVCS+++  TFRGPS+++L  L GQA     AAA+I+G++P
Sbjct:    1 MVNVEEIRNAQRAQGPATVLAIGTSTPSNCVDQSTYPDYYFRITNSEHKTELKEKFKRMCEKSMIKKRYMHLTEEILQENPNICAYMAPSLDARQNIVVVEVPKLGKEAAQKAIKEWGQSKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSESHLDSLVGQALFGDGAAAIIVGSDP 228          
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: CHS2_SECCE (Chalcone synthase 2 OS=Secale cereale GN=CHS2 PE=2 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 4.586e-84
Identity = 146/225 (64.89%), Postives = 183/225 (81.33%), Query Frame = 1
Query:   46 VKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            V++ +  Q+  G AT+LAIGTA P NC+YQADYPDYYF++T SDHM  LK+KFKR+C+KS ++KRY H+TE+IL+ NPN+CAY   SLD+RQDI+V EVPKLG+ AA KAIKEWGQ +S+ITHL+FC+  GVDMPGADYQLTKMLGL PSVKR+M+Y QGC+ G T +R+AKD AENN G RVLVVCS+++  TFRGP +++L  L GQA     AAA+IIGA+P
Sbjct:    7 VEEVRKAQRAEGPATVLAIGTATPANCVYQADYPDYYFKITKSDHMADLKEKFKRMCDKSQIRKRYMHLTEEILQDNPNMCAYMAPSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPRSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPHESHLDSLVGQALFGDGAAAVIIGADP 231          
The following BLAST results are available for this feature:
BLAST of FC920691 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CHS2_CITSI1.207e-8465.35Chalcone synthase 2 OS=Citrus sinensis GN=CHS2 PE=... [more]
CHS5_SOYBN1.576e-8464.04Chalcone synthase 5 OS=Glycine max GN=CHS5 PE=3 SV... [more]
CHS2_SOYBN1.576e-8464.04Chalcone synthase 2 OS=Glycine max GN=CHS2 PE=3 SV... [more]
CHSY_VIGUN2.059e-8465.35Chalcone synthase OS=Vigna unguiculata GN=CHS PE=2... [more]
CHSY_CARAN2.689e-8466.97Chalcone synthase OS=Cardamine amara GN=CHS PE=3 S... [more]
CHS6_SOYBN2.689e-8464.47Chalcone synthase 6 OS=Glycine max GN=CHS6 PE=3 SV... [more]
CHS1_SOYBN2.689e-8464.04Chalcone synthase 1 OS=Glycine max GN=CHS1 PE=3 SV... [more]
CHSE_IPOPU3.512e-8465.79Chalcone synthase E OS=Ipomoea purpurea GN=CHSE PE... [more]
CHSY_CATRO4.586e-8464.47Chalcone synthase OS=Catharanthus roseus GN=CHS PE... [more]
CHS2_SECCE4.586e-8464.89Chalcone synthase 2 OS=Secale cereale GN=CHS2 PE=2... [more]

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Properties
Property NameValue
Genbank descriptionC32011G11EF RVDevelop1 Citrus clementina cDNA clone C32011G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920691 ID=FC920691; Name=FC920691; organism=Citrus clementina; type=EST; length=720bp
GGAGACGTGTTCATCAAAATCTCGGTTGAATATATAATGGAGAAAGTTAA
AGATGGGAAGAACCAACAGCAAGGAGGAGGGTTAGCCACGATCCTAGCCA
TCGGCACTGCAAATCCACCAAACTGCATATACCAAGCTGACTACCCTGAT
TATTACTTCCGTGTCACCAACAGTGACCACATGACTCTCCTCAAACAAAA
ATTCAAACGCATCTGCGAGAAATCAAATGTGAAGAAACGCTACTTCCATG
TTACCGAAGATATTCTCAAAAAGAACCCAAATATATGTGCCTACGACGGC
TCCTCCCTCGATAGCCGTCAAGATATATTGGTTAGGGAAGTACCGAAACT
TGGCGAGGAAGCGGCAACAAAAGCAATCAAAGAATGGGGCCAATCAAAAT
CCCAGATCACGCATCTCATTTTCTGCTCACTTGTGGGCGTAGACATGCCC
GGGGCTGACTATCAGCTGACCAAAATGTTGGGCCTCAACCCATCTGTCAA
ACGAGTCATGCTATACTTTCAAGGCTGTTACATTGGCGCCACAGCCATCC
GAATGGCCAAGGACTTTGCTGAAAACAACCCTGGTACCCGCGTTCTAGTC
GTATGCTCTGACTTATCCCTTGGTACTTTCCGTGGACCTTCTGATGCCAA
CTTAGGCTGCCTTGCAGGCCAAGCCCCCTCTTCGCGACGCGCCGCAGCTT
TAATCATTGGCGCTAATCCT
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