FC920691

Overview
NameFC920691
Unique NameFC920691
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length720
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: CHS1_DAUCA (Chalcone synthase 1 OS=Daucus carota GN=CHS1 PE=2 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 1.688e-78
Identity = 138/228 (60.53%), Postives = 177/228 (77.63%), Query Frame = 1
Query:   37 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            M  V + +  Q+  G AT+LAIGTA PPNC+ Q+ Y DYYFR+TNS+    LK+KF+R+CEKS +  RY H+TED+LK+NP+ C Y  SSLD+RQDI+V EVPKLG+EAA +AIKEWGQ KS+ITHLIFC+  GVDMPGAD++LTK+LGL PSVKR M+Y QGC+ G T +R+AKD AENN   RVLVVCS++++ TFRGP+D +L  L GQA     A A+I+G++P
Sbjct:    1 MVTVNEFRKAQRAEGPATVLAIGTATPPNCVDQSAYADYYFRITNSEDKPELKEKFRRMCEKSMINTRYMHLTEDLLKQNPSFCEYMASSLDARQDIVVNEVPKLGKEAALRAIKEWGQPKSKITHLIFCTTSGVDMPGADFRLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKNARVLVVCSEITVITFRGPNDTHLDSLVGQALFGDGAGAVIVGSDP 228          
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: CHSY_ONOVI (Chalcone synthase OS=Onobrychis viciifolia GN=CHS PE=2 SV=1)

HSP 1 Score: 291.582 bits (745), Expect = 2.879e-78
Identity = 138/228 (60.53%), Postives = 176/228 (77.19%), Query Frame = 1
Query:   37 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            M  V + +  Q+  G  TI AI TANPPNC+ Q+ YPD+YF++TNS+H   LK+KF+R+ +KS +K+RY ++TE+ILK+NPN+C Y   SLD+RQD+ V EVP+LG+EAA KAIKEWGQ KS+ITHLI C+  GVDMPGADYQLTK+LGL P VKR M+Y QGC+ G T +R+AKD AENN G RVLVVCS+++  TFRGPSD +L  L GQA     AAALI+G++P
Sbjct:    1 MVDVAESRRTQRAEGPRTIFAIATANPPNCVEQSTYPDFYFKITNSEHKVELKEKFQRMDDKSMIKRRYMYLTEEILKENPNVCEYMAPSLDARQDMFVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPHVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDP 228          
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: VPS_HUMLU (Phloroisovalerophenone synthase OS=Humulus lupulus GN=VPS PE=2 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 4.911e-78
Identity = 139/225 (61.78%), Postives = 176/225 (78.22%), Query Frame = 1
Query:   46 VKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            V+  +  Q+  G ATILAIGTA P NC  QAD+PDYYFRVT S+HMT LK+KF+R+CEKS +KKRY H+TE+ LK+NP++C Y+  SL++RQD+LV EVPKLG+EAA  AIKEWGQ KS+ITHLIFC+   +DMPGADYQ  K+LGL PSVKRVMLY  GCY G   +R+AKD AENN G RVL+VCS+++   FRGPS+ +L CL GQ+     A+++I+GA+P
Sbjct:    6 VEQIRKAQRAEGPATILAIGTAVPANCFNQADFPDYYFRVTKSEHMTDLKKKFQRMCEKSTIKKRYLHLTEEHLKQNPHLCEYNAPSLNTRQDMLVVEVPKLGKEAAINAIKEWGQPKSKITHLIFCTGSSIDMPGADYQCAKLLGLRPSVKRVMLYQLGCYAGGKVLRIAKDIAENNKGARVLIVCSEITACIFRGPSEKHLDCLVGQSLFGDGASSVIVGADP 230          
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: CHS9_DAUCA (Chalcone synthase 9 OS=Daucus carota GN=CHS9 PE=2 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 4.911e-78
Identity = 137/228 (60.09%), Postives = 177/228 (77.63%), Query Frame = 1
Query:   37 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            M  V + +  Q+  G AT+LAIGTA PPNC+ Q+ Y DYYFR+TNS+    LK+KF+R+CEKS +  RY H+TED+LK+NP+ C Y  SSLD+RQDI+V EVPKLG+EAA +AIKEWG+ KS+ITHLIFC+  GVDMPGAD++LTK+LGL PSVKR M+Y QGC+ G T +R+AKD AENN   RVLVVCS++++ TFRGP+D +L  L GQA     A A+I+G++P
Sbjct:    1 MVTVNEFRKAQRAEGPATVLAIGTATPPNCVDQSAYADYYFRITNSEDKPELKEKFRRMCEKSMINTRYMHLTEDLLKQNPSFCEYMASSLDARQDIVVNEVPKLGKEAALRAIKEWGRPKSKITHLIFCTTSGVDMPGADFRLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKNARVLVVCSEITVITFRGPNDTHLDSLVGQALFGDGAGAVIVGSDP 228          
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: ACS2_RUTGR (Acridone synthase 2 OS=Ruta graveolens GN=ACS2 PE=1 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 8.377e-78
Identity = 139/228 (60.96%), Postives = 174/228 (76.32%), Query Frame = 1
Query:   37 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            ME +K+ +  Q+  G A ILAIGTA P N   QADYPDYYF++T S+HMT LK KFK +CEKS ++KR+   +++ LK NP +C + G SL++RQDI V E P++G+EAA KAIKEWG  KS ITHLIFC+  GVDMPGADYQLT+MLGLNPSVKR+M+Y QGCY G T +R+AKD AENN G+RVLVVCS+L+  TFRGPS   +  L GQA  +  AAAL++GA+P
Sbjct:    1 MESLKEMRKAQKSEGPAAILAIGTATPDNVYIQADYPDYYFKITKSEHMTELKDKFKTLCEKSMIRKRHMCFSQEFLKANPEVCKHMGKSLNARQDIAVVETPRIGKEAAVKAIKEWGHPKSSITHLIFCTSAGVDMPGADYQLTRMLGLNPSVKRMMIYQQGCYAGGTVLRLAKDLAENNKGSRVLVVCSELTAPTFRGPSPDAVDSLVGQALFADGAAALVVGADP 228          
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: THS5_VITVI (Stilbene synthase 5 OS=Vitis vinifera GN=GSVIVT00007357001 PE=3 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 1.094e-77
Identity = 138/228 (60.53%), Postives = 179/228 (78.51%), Query Frame = 1
Query:   37 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            M  V++ +N Q+  G ATILAIGTA P +C+YQ+DY DYYF+VT S+HMT LK+KF RIC+KS +KKRY H+TE++L+++PNI AY   SL+ RQ+I+  EVPKLG+EAA KA+KEWGQ KS+ITHL+FC+  GV+MPGADY+L  +LGL  SV+RVMLY QGCY G T +R AKD AENN G RVLVVCS++++ TFRGPS+  L  L GQA     +AA+I+G++P
Sbjct:    1 MASVEEIRNAQRAKGPATILAIGTATPDHCVYQSDYADYYFKVTKSEHMTELKKKFNRICDKSMIKKRYIHLTEEMLEEHPNIGAYMAPSLNIRQEIITAEVPKLGKEAALKALKEWGQPKSKITHLVFCTTSGVEMPGADYKLANLLGLETSVRRVMLYHQGCYAGGTVLRTAKDLAENNAGARVLVVCSEITVVTFRGPSEDALDSLVGQALFGDGSAAVIVGSDP 228          
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: THS3_ARAHY (Stilbene synthase 3 OS=Arachis hypogaea PE=2 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 2.437e-77
Identity = 135/228 (59.21%), Postives = 179/228 (78.51%), Query Frame = 1
Query:   37 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            M  V   +  Q+  G AT+LAIGTANPPNCI Q+ Y DYYFRVTNS+HMT LK+KF+RICE++ +K R+ ++TE+ILK+NPN+CAY   SLD+R+D+++REVP++G+EAATKAIKEWGQ  S+ITHLIFC+  GV +PG DY+L  +LGL+P VKR M+Y QGC+ G T +R+AKD AENN   RVL+VCS+ +  TFRGPS+ ++  L GQA  +  AAA+IIG++P
Sbjct:    1 MVSVSGIRKVQRAEGPATVLAIGTANPPNCIDQSTYADYYFRVTNSEHMTDLKKKFQRICERTQIKNRHMYLTEEILKENPNMCAYKAPSLDAREDMMIREVPRVGKEAATKAIKEWGQPMSKITHLIFCTTSGVALPGVDYELIVLLGLDPCVKRYMMYHQGCFAGGTVLRLAKDLAENNKDARVLIVCSENTAVTFRGPSETDMDSLVGQALFADGAAAIIIGSDP 228          
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: CHS1_MEDSA (Chalcone synthase 1 OS=Medicago sativa GN=CHS1 PE=2 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 4.158e-77
Identity = 138/228 (60.53%), Postives = 175/228 (76.75%), Query Frame = 1
Query:   37 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            M  V + +  Q+  G ATI+AIGTANP NC+ Q+ YPD+YF++TNS+H   LK+KF+R+C+KS +K+RY ++TE+ILK NP +C Y   SL +RQD+ V  VP+LG+EAA KAIKEWGQ KS+ITHLIFC+  GVDMPGADYQLTK+LGL P VKR M+Y QGC+ G T +R+AKD AENN G RVLVVCS+ +  TFRGPSD +L  L GQA     AAALI+G++P
Sbjct:    1 MVSVAEIRQAQRAEGPATIMAIGTANPANCVEQSTYPDFYFKITNSEHKVELKEKFQRMCDKSMIKRRYMYLTEEILKDNPRVCEYMAPSLAARQDMAVVVVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEETPVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDP 228          
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: THS7_VITVI (Stilbene synthase 6 OS=Vitis vinifera GN=STS PE=2 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 5.430e-77
Identity = 136/228 (59.65%), Postives = 178/228 (78.07%), Query Frame = 1
Query:   37 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            M  V++ +N Q+  G ATILAIGTA P +C+YQ+DY DYYFRVT S+HMT LK+KF RIC+KS +KKRY H+TE++L+++PNI AY   SL+ RQ+I+  EVP+LG +AA KA+KEWGQ KS+ITHL+FC+  GV+MPGADY+L  +LGL  SV+RVMLY QGCY G T +R AKD AENN G RVLVVCS++++ TFRGPS+  L  L GQA     ++A+I+G++P
Sbjct:    1 MASVEEFRNAQRAKGPATILAIGTATPDHCVYQSDYADYYFRVTKSEHMTELKKKFNRICDKSMIKKRYIHLTEEMLEEHPNIGAYMAPSLNIRQEIITAEVPRLGRDAALKALKEWGQPKSKITHLVFCTTSGVEMPGADYKLANLLGLETSVRRVMLYHQGCYAGGTVLRTAKDLAENNAGARVLVVCSEITVVTFRGPSEDALDSLVGQALFGDGSSAVIVGSDP 228          
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: THS1_VITVI (Stilbene synthase 1 OS=Vitis vinifera GN=VINST1 PE=1 SV=2)

HSP 1 Score: 287.345 bits (734), Expect = 5.430e-77
Identity = 136/228 (59.65%), Postives = 178/228 (78.07%), Query Frame = 1
Query:   37 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            M  V++ +N Q+  G ATILAIGTA P +C+YQ+DY DYYFRVT S+HMT LK+KF RIC+KS +KKRY H+TE++L+++PNI AY   SL+ RQ+I+  EVP+LG +AA KA+KEWGQ KS+ITHL+FC+  GV+MPGADY+L  +LGL  SV+RVMLY QGCY G T +R AKD AENN G RVLVVCS++++ TFRGPS+  L  L GQA     ++A+I+G++P
Sbjct:    1 MASVEEFRNAQRAKGPATILAIGTATPDHCVYQSDYADYYFRVTKSEHMTELKKKFNRICDKSMIKKRYIHLTEEMLEEHPNIGAYMAPSLNIRQEIITAEVPRLGRDAALKALKEWGQPKSKITHLVFCTTSGVEMPGADYKLANLLGLETSVRRVMLYHQGCYAGGTVLRTAKDLAENNAGARVLVVCSEITVVTFRGPSEDALDSLVGQALFGDGSSAVIVGSDP 228          
The following BLAST results are available for this feature:
BLAST of FC920691 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CHS1_DAUCA1.688e-7860.53Chalcone synthase 1 OS=Daucus carota GN=CHS1 PE=2 ... [more]
CHSY_ONOVI2.879e-7860.53Chalcone synthase OS=Onobrychis viciifolia GN=CHS ... [more]
VPS_HUMLU4.911e-7861.78Phloroisovalerophenone synthase OS=Humulus lupulus... [more]
CHS9_DAUCA4.911e-7860.09Chalcone synthase 9 OS=Daucus carota GN=CHS9 PE=2 ... [more]
ACS2_RUTGR8.377e-7860.96Acridone synthase 2 OS=Ruta graveolens GN=ACS2 PE=... [more]
THS5_VITVI1.094e-7760.53Stilbene synthase 5 OS=Vitis vinifera GN=GSVIVT000... [more]
THS3_ARAHY2.437e-7759.21Stilbene synthase 3 OS=Arachis hypogaea PE=2 SV=1[more]
CHS1_MEDSA4.158e-7760.53Chalcone synthase 1 OS=Medicago sativa GN=CHS1 PE=... [more]
THS7_VITVI5.430e-7759.65Stilbene synthase 6 OS=Vitis vinifera GN=STS PE=2 ... [more]
THS1_VITVI5.430e-7759.65Stilbene synthase 1 OS=Vitis vinifera GN=VINST1 PE... [more]

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Properties
Property NameValue
Genbank descriptionC32011G11EF RVDevelop1 Citrus clementina cDNA clone C32011G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920691 ID=FC920691; Name=FC920691; organism=Citrus clementina; type=EST; length=720bp
GGAGACGTGTTCATCAAAATCTCGGTTGAATATATAATGGAGAAAGTTAA
AGATGGGAAGAACCAACAGCAAGGAGGAGGGTTAGCCACGATCCTAGCCA
TCGGCACTGCAAATCCACCAAACTGCATATACCAAGCTGACTACCCTGAT
TATTACTTCCGTGTCACCAACAGTGACCACATGACTCTCCTCAAACAAAA
ATTCAAACGCATCTGCGAGAAATCAAATGTGAAGAAACGCTACTTCCATG
TTACCGAAGATATTCTCAAAAAGAACCCAAATATATGTGCCTACGACGGC
TCCTCCCTCGATAGCCGTCAAGATATATTGGTTAGGGAAGTACCGAAACT
TGGCGAGGAAGCGGCAACAAAAGCAATCAAAGAATGGGGCCAATCAAAAT
CCCAGATCACGCATCTCATTTTCTGCTCACTTGTGGGCGTAGACATGCCC
GGGGCTGACTATCAGCTGACCAAAATGTTGGGCCTCAACCCATCTGTCAA
ACGAGTCATGCTATACTTTCAAGGCTGTTACATTGGCGCCACAGCCATCC
GAATGGCCAAGGACTTTGCTGAAAACAACCCTGGTACCCGCGTTCTAGTC
GTATGCTCTGACTTATCCCTTGGTACTTTCCGTGGACCTTCTGATGCCAA
CTTAGGCTGCCTTGCAGGCCAAGCCCCCTCTTCGCGACGCGCCGCAGCTT
TAATCATTGGCGCTAATCCT
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