FC920691

Overview
NameFC920691
Unique NameFC920691
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length720
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: CHSY_ARATH (Chalcone synthase OS=Arabidopsis thaliana GN=CHS PE=1 SV=1)

HSP 1 Score: 306.605 bits (784), Expect = 8.649e-83
Identity = 145/221 (65.61%), Postives = 182/221 (82.35%), Query Frame = 1
Query:   58 KNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            +  Q+  G A ILAIGTANP N + QA+YPDYYFR+TNS+HMT LK+KFKR+C+KS ++KR+ H+TE+ LK+NP++CAY   SLD+RQDI+V EVPKLG+EAA KAIKEWGQ KS+ITH++FC+  GVDMPGADYQLTK+LGL PSVKR+M+Y QGC+ G T +R+AKD AENN G RVLVVCS+++  TFRGPSD +L  L GQA  S  AAALI+G++P
Sbjct:   13 RQAQRADGPAGILAIGTANPENHVLQAEYPDYYFRITNSEHMTDLKEKFKRMCDKSTIRKRHMHLTEEFLKENPHMCAYMAPSLDTRQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFSDGAAALIVGSDP 233          
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: CHSJ_PETHY (Chalcone synthase J OS=Petunia hybrida GN=CHSJ PE=2 SV=2)

HSP 1 Score: 306.22 bits (783), Expect = 1.130e-82
Identity = 146/228 (64.04%), Postives = 183/228 (80.26%), Query Frame = 1
Query:   37 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            M  V++ +  Q+  G ATI+AIGTA P NC+ Q+ YPDYYFR+TNS+H T LK+KF+R+C+KS +KKRY H+TE+ILK+NPNIC Y   SLD+RQDI+V EVPKLG+EAA KAIKEWGQ KS+ITHL+FC+  GVDMPGADYQLTK+LGL  SVKR+M+Y QGC+ G T +R+AKD AENN G RVLVVCS+++  TFRGP+D +L  L GQA     AAA+IIG++P
Sbjct:    1 MVTVEEIRRAQRAEGPATIMAIGTATPSNCVDQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMIKKRYMHLTEEILKENPNICEYMAPSLDARQDIVVVEVPKLGKEAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPNDTHLDSLVGQALFGDGAAAIIIGSDP 228          
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: CHS2_RUTGR (Chalcone synthase 2 OS=Ruta graveolens GN=CHS2 PE=2 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 1.130e-82
Identity = 146/225 (64.89%), Postives = 181/225 (80.44%), Query Frame = 1
Query:   46 VKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            V++ +  Q+  G A +LAIGTA P N + QADYPDYYFR+T S+HMT LK+KFKR+C+KS ++KRY ++TEDILK+NPN+CAY   SLD+RQDI+V EVPKLG+EAA KAIKEWGQ KS+ITHLIFC+  GVDMPG DYQLTK+LGL PSVKR M+Y QGC+ G T +R+AKD AENN G RVLVVCS+++  TFRGP+D +L  L GQA     AAA+I+GA+P
Sbjct:    6 VEEIRKAQRADGPAAVLAIGTATPANYVTQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIRKRYMYLTEDILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGCDYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAAVIVGADP 230          
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: CHSY_PINSY (Chalcone synthase OS=Pinus sylvestris GN=CHS PE=3 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 1.475e-82
Identity = 144/229 (62.88%), Postives = 185/229 (80.79%), Query Frame = 1
Query:   34 IMEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            +M+ ++  +  Q+  G ATILAIGTA PPN + Q+ YPDYYF++TNS+HMT LK+KF+R+C+KS +KKRY ++TE+ILK+NP +C Y   SLD+RQD++V EVP+LG+EAA KAIKEWGQ KS+ITH+IFC+  GVDMPGADYQLTK+LGL PSVKRVM+Y QGC+ G T +R+AKD AENN G RVLVVCS+++  TFRGPSD +L  + GQA     AAALI+GA+P
Sbjct:    5 MMKDLEAFRKAQRADGPATILAIGTATPPNAVDQSSYPDYYFKITNSEHMTELKEKFRRMCDKSAIKKRYMYLTEEILKENPKVCEYMAPSLDARQDMVVVEVPRLGKEAAAKAIKEWGQPKSKITHVIFCTTSGVDMPGADYQLTKLLGLRPSVKRVMMYQQGCFAGGTVLRVAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSMVGQALFGDGAAALIVGADP 233          
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: CHSY_HYDMC (Chalcone synthase OS=Hydrangea macrophylla GN=CHS PE=2 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 1.475e-82
Identity = 146/228 (64.04%), Postives = 183/228 (80.26%), Query Frame = 1
Query:   37 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            M  V++ +  Q+  G ATILAIGTA PPN + Q+ YPD+YFRVTNS+H   LK KF+R+C+ S +KKRY H+TE+ILK+NPNICAY   SLD+RQD++V E+PKLG+EAAT+AIKEWGQ KS+ITHL+FC+  GVDMPGADYQLTK+LGL PSVKR+M+Y QGC+ G T +R+AKD AENN G RVLVVCS+++  TFRGPSD +L  L GQA     AAA+IIG++P
Sbjct:    1 MVTVEEVRKAQRAEGPATILAIGTATPPNYVDQSTYPDFYFRVTNSEHKKELKAKFQRMCDNSQIKKRYMHLTEEILKENPNICAYMAPSLDARQDMVVVEIPKLGKEAATRAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGSDP 228          
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: CHSA_PETHY (Chalcone synthase A OS=Petunia hybrida GN=CHSA PE=2 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 1.927e-82
Identity = 144/228 (63.16%), Postives = 182/228 (79.82%), Query Frame = 1
Query:   37 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            M  V++ +  Q+  G AT++AIGTA P NC+ Q+ YPDYYFR+TNS+H T LK+KFKR+CEKS +KKRY H+TE+ILK+NP++C Y   SLD+RQDI+V EVPKLG+EAA KAIKEWGQ KS+ITHL+FC+  GVDMPG DYQLTK+LGL PSVKR+M+Y QGC+ G T +R+AKD AENN G RVLVVCS+++  TFRGP+D +L  L GQA     A A+IIG++P
Sbjct:    1 MVTVEEYRKAQRAEGPATVMAIGTATPTNCVDQSTYPDYYFRITNSEHKTDLKEKFKRMCEKSMIKKRYMHLTEEILKENPSMCEYMAPSLDARQDIVVVEVPKLGKEAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGCDYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPNDTHLDSLVGQALFGDGAGAIIIGSDP 228          
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: CHS1_SINAL (Chalcone synthase 1 OS=Sinapis alba GN=CHS1 PE=2 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 1.927e-82
Identity = 145/220 (65.91%), Postives = 180/220 (81.82%), Query Frame = 1
Query:   58 KNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGAN 717
            +  Q+  G A ILAIGTANP N + QA+YPDYYFR+TNS+HMT LK+KFKR+C+KS ++KR+ H+TE+ LK NPN+CAY   SLD+RQDI+V EVPKLG+EAA KAIKEWGQ KS+ITH++FC+  GVDMPGADYQLTK+LGL PSVKR+M+Y QGC+ G T +R+AKD AENN G RVLVVCS+++  TFRGPSD +L  L GQA  S  AAALI+G++
Sbjct:   13 RKAQRADGPAGILAIGTANPANHVIQAEYPDYYFRITNSEHMTDLKEKFKRMCDKSTIRKRHMHLTEEFLKDNPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFSDGAAALIVGSD 232          
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: CHS7_SOYBN (Chalcone synthase 7 OS=Glycine max GN=CHS7 PE=3 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 3.287e-82
Identity = 147/228 (64.47%), Postives = 181/228 (79.39%), Query Frame = 1
Query:   37 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            M  V + +  Q+  G ATILAIGTANPPN + Q+ YPDYYFR+TNSDHMT LK+KF+R+C+KS +K RY ++ E+ILK+NPN+CAY   SLD+RQD++V EVPKLG+EAA KAIKEWGQ KS+ITHLIFC+  GVDMPGADYQLTK LGL P VKR M+Y QGC+ G T +R+AKD AENN G RVLVVCS+++  TFRGPSD +L  L GQA     AAA+I+G++P
Sbjct:    1 MVSVAEIRQAQRAEGPATILAIGTANPPNRVDQSTYPDYYFRITNSDHMTELKEKFQRMCDKSMIKTRYMYLNEEILKENPNMCAYMAPSLDARQDMVVVEVPKLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKQLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIVGSDP 228          
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: CHSY_ORYSJ (Chalcone synthase OS=Oryza sativa subsp. japonica GN=CHS PE=2 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 4.293e-82
Identity = 140/225 (62.22%), Postives = 182/225 (80.89%), Query Frame = 1
Query:   46 VKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            V++ +  Q+  G AT+LAIGTA P NC+YQADYPDYYFR+T S+HM  LK+KFKR+C+KS ++KRY H+TE+IL++NPN+CAY   SLD+RQDI+V EVPKLG+ AA KAIKEWGQ +S+ITHL+FC+  GVDMPGADYQL KMLGL P+V R+M+Y QGC+ G T +R+AKD AENN G RVL VCS+++  TFRGPS+++L  + GQA     AAA+I+G++P
Sbjct:    7 VEEVRRAQRAEGPATVLAIGTATPANCVYQADYPDYYFRITKSEHMVELKEKFKRMCDKSQIRKRYMHLTEEILQENPNMCAYMAPSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPRSRITHLVFCTTSGVDMPGADYQLAKMLGLRPNVNRLMMYQQGCFAGGTVLRVAKDLAENNRGARVLAVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGSDP 231          
BLAST of FC920691 vs. ExPASy Swiss-Prot
Match: CHSY_ORYSI (Chalcone synthase OS=Oryza sativa subsp. indica GN=CHS PE=2 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 4.293e-82
Identity = 140/225 (62.22%), Postives = 182/225 (80.89%), Query Frame = 1
Query:   46 VKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGTRVLVVCSDLSLGTFRGPSDANLGCLAGQAPSSRRAAALIIGANP 720
            V++ +  Q+  G AT+LAIGTA P NC+YQADYPDYYFR+T S+HM  LK+KFKR+C+KS ++KRY H+TE+IL++NPN+CAY   SLD+RQDI+V EVPKLG+ AA KAIKEWGQ +S+ITHL+FC+  GVDMPGADYQL KMLGL P+V R+M+Y QGC+ G T +R+AKD AENN G RVL VCS+++  TFRGPS+++L  + GQA     AAA+I+G++P
Sbjct:    7 VEEVRRAQRAEGPATVLAIGTATPANCVYQADYPDYYFRITKSEHMVELKEKFKRMCDKSQIRKRYMHLTEEILQENPNMCAYMAPSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPRSRITHLVFCTTSGVDMPGADYQLAKMLGLRPNVSRLMMYQQGCFAGGTVLRVAKDLAENNRGARVLAVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGSDP 231          
The following BLAST results are available for this feature:
BLAST of FC920691 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CHSY_ARATH8.649e-8365.61Chalcone synthase OS=Arabidopsis thaliana GN=CHS P... [more]
CHSJ_PETHY1.130e-8264.04Chalcone synthase J OS=Petunia hybrida GN=CHSJ PE=... [more]
CHS2_RUTGR1.130e-8264.89Chalcone synthase 2 OS=Ruta graveolens GN=CHS2 PE=... [more]
CHSY_PINSY1.475e-8262.88Chalcone synthase OS=Pinus sylvestris GN=CHS PE=3 ... [more]
CHSY_HYDMC1.475e-8264.04Chalcone synthase OS=Hydrangea macrophylla GN=CHS ... [more]
CHSA_PETHY1.927e-8263.16Chalcone synthase A OS=Petunia hybrida GN=CHSA PE=... [more]
CHS1_SINAL1.927e-8265.91Chalcone synthase 1 OS=Sinapis alba GN=CHS1 PE=2 S... [more]
CHS7_SOYBN3.287e-8264.47Chalcone synthase 7 OS=Glycine max GN=CHS7 PE=3 SV... [more]
CHSY_ORYSJ4.293e-8262.22Chalcone synthase OS=Oryza sativa subsp. japonica ... [more]
CHSY_ORYSI4.293e-8262.22Chalcone synthase OS=Oryza sativa subsp. indica GN... [more]

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Properties
Property NameValue
Genbank descriptionC32011G11EF RVDevelop1 Citrus clementina cDNA clone C32011G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920691 ID=FC920691; Name=FC920691; organism=Citrus clementina; type=EST; length=720bp
GGAGACGTGTTCATCAAAATCTCGGTTGAATATATAATGGAGAAAGTTAA
AGATGGGAAGAACCAACAGCAAGGAGGAGGGTTAGCCACGATCCTAGCCA
TCGGCACTGCAAATCCACCAAACTGCATATACCAAGCTGACTACCCTGAT
TATTACTTCCGTGTCACCAACAGTGACCACATGACTCTCCTCAAACAAAA
ATTCAAACGCATCTGCGAGAAATCAAATGTGAAGAAACGCTACTTCCATG
TTACCGAAGATATTCTCAAAAAGAACCCAAATATATGTGCCTACGACGGC
TCCTCCCTCGATAGCCGTCAAGATATATTGGTTAGGGAAGTACCGAAACT
TGGCGAGGAAGCGGCAACAAAAGCAATCAAAGAATGGGGCCAATCAAAAT
CCCAGATCACGCATCTCATTTTCTGCTCACTTGTGGGCGTAGACATGCCC
GGGGCTGACTATCAGCTGACCAAAATGTTGGGCCTCAACCCATCTGTCAA
ACGAGTCATGCTATACTTTCAAGGCTGTTACATTGGCGCCACAGCCATCC
GAATGGCCAAGGACTTTGCTGAAAACAACCCTGGTACCCGCGTTCTAGTC
GTATGCTCTGACTTATCCCTTGGTACTTTCCGTGGACCTTCTGATGCCAA
CTTAGGCTGCCTTGCAGGCCAAGCCCCCTCTTCGCGACGCGCCGCAGCTT
TAATCATTGGCGCTAATCCT
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