FC920699

Overview
NameFC920699
Unique NameFC920699
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length747
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14178 contig Ccv1_Contig14178:1..747. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920699 vs. ExPASy Swiss-Prot
Match: NP24_SOLLC (Protein NP24 OS=Solanum lycopersicum PE=1 SV=2)

HSP 1 Score: 286.574 bits (732), Expect = 9.850e-77
Identity = 129/207 (62.32%), Postives = 155/207 (74.88%), Query Frame = 3
Query:  105 HAAKFDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNR--VIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSIFTCPTG-TDYKVVFCP 713
            +AA  ++ NNCP TVWAA+ P GGGR+L++GQTW I A  GTK ARIW RT C F+A+G+G C+TGDC G+L+C G+G  PNTLAEYAL QF+++DF D+S +DGFN+PM F+   PS  +   I CTANI GECP  LKVPGGCN PC  F   +YCC  G CGPT  SKFFK RCPD YSYP+DD TS FTCP G T+Y+VVFCP
Sbjct:   20 YAATIEVRNNCPYTVWAASTPIGGGRRLNRGQTWVINAPRGTKMARIWGRTGCNFNAAGRGTCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTKPSGGKCHAIHCTANINGECPRALKVPGGCNNPCTTFGGQQYCCTQGPCGPTELSKFFKKRCPDAYSYPQDDPTSTFTCPGGSTNYRVVFCP 226          
BLAST of FC920699 vs. ExPASy Swiss-Prot
Match: IAAT_MAIZE (Alpha-amylase/trypsin inhibitor OS=Zea mays PE=1 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 2.866e-76
Identity = 130/206 (63.11%), Postives = 155/206 (75.24%), Query Frame = 3
Query:  111 AKFDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPS-CNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCC---NSGNCGPTGFSKFFKDRCPDVYSYPKDDATSIFTCPTGTDYKVVFCP 713
            A F + N CP TVWAA+VP GGGRQL++G++W ITA  GT AARIWART CQFDASG+G C TGDC G+++C GYG APNTLAEYALKQFN++DF D+S +DGFNVP  F     S C+R  +C  ++   CP EL+  G CN  CPVFK DEYCC    + NC PT +S++FK +CPD YSYPKDDATS FTCP GT+YKVVFCP
Sbjct:    1 AVFTVVNQCPFTVWAASVPVGGGRQLNRGESWRITAPAGTTAARIWARTGCQFDASGRGSCRTGDCGGVVQCTGYGRAPNTLAEYALKQFNNLDFFDISILDGFNVPYSFLPDGGSGCSRGPRCAVDVNARCPAELRQDGVCNNACPVFKKDEYCCVGSAANNCHPTNYSRYFKGQCPDAYSYPKDDATSTFTCPAGTNYKVVFCP 206          
BLAST of FC920699 vs. ExPASy Swiss-Prot
Match: OS35_SOLCO (Osmotin-like protein OSML15 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 3.169e-75
Identity = 125/203 (61.58%), Postives = 151/203 (74.38%), Query Frame = 3
Query:  117 FDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRV--IKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSIFTCPT-GTDYKVVFCP 713
            F++ NNCP TVWAAA P GGGR+L++GQ+W   A PGTK ARIW RT C FD +G+G C+TGDC G+LEC+G+G  PNTLAEYAL QF+++DF D+S IDGFN+PM F   +P   +   I+C ANI GECP  L+VPGGCN PC  F   +YCC  G CGPT  S+FFK RCPD YSYP+DD TS FTC +  TDYKV+FCP
Sbjct:   25 FEVHNNCPYTVWAAATPIGGGRRLERGQSWWFWAPPGTKMARIWGRTNCNFDGAGRGWCQTGDCGGVLECKGWGKPPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTNPGPGKCHPIQCVANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTDLSRFFKQRCPDAYSYPQDDPTSTFTCQSWTTDYKVMFCP 227          
BLAST of FC920699 vs. ExPASy Swiss-Prot
Match: OLPA_TOBAC (Osmotin-like protein OS=Nicotiana tabacum GN=OLPA PE=1 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 5.405e-75
Identity = 125/203 (61.58%), Postives = 151/203 (74.38%), Query Frame = 3
Query:  117 FDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRV--IKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSIFTCPT-GTDYKVVFCP 713
            F++ NNCP TVWAAA P GGGR+L++GQ+W   A PGTK ARIW RT C FD +G+G C+TGDC G+LEC+G+G  PNTLAEYAL QF+++DF D+S IDGFN+PM F    P   +   I+CTANI GECP  L+VPGGCN PC  F   +YCC  G CGPT  S++FK RCPD YSYP+DD TS FTC +  TDYKV+FCP
Sbjct:   25 FEVHNNCPYTVWAAATPVGGGRRLERGQSWWFWAPPGTKMARIWGRTNCNFDGAGRGWCQTGDCGGVLECKGWGKPPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTKPGPGKCHGIQCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTELSRWFKQRCPDAYSYPQDDPTSTFTCTSWTTDYKVMFCP 227          
BLAST of FC920699 vs. ExPASy Swiss-Prot
Match: THM2_THADA (Thaumatin-2 OS=Thaumatococcus daniellii PE=2 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 7.823e-66
Identity = 116/209 (55.50%), Postives = 148/209 (70.81%), Query Frame = 3
Query:  108 AAKFDITNNCPDTVWAAAVPG------GGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVP-GGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSIFTCPTGTDYKVVFCP 713
            AA F+I N C  TVWAAA  G      GGRQL+ G++WTI  EPGTK  +IWART C FD SG+G C TGDC GLL+C+ +G  P TLAE++L Q+   D+ID+SNI GFNVPM+FS  +  C R ++C A+I+G+CP +LK P GGCN  C VF+T EYCC +G CGPT +S+FFK  CPD +SY  D  T++ TCP  ++Y+V FCP
Sbjct:   22 AATFEIVNRCSYTVWAAASKGDAALDAGGRQLNSGESWTINVEPGTKGGKIWARTDCYFDDSGRGICRTGDCGGLLQCKRFGRPPTTLAEFSLNQYG-KDYIDISNIKGFNVPMDFSPTTRGC-RGVRCAADIVGQCPAKLKAPGGGCNDACTVFQTSEYCCTTGKCGPTEYSRFFKRLCPDAFSYVLDKPTTV-TCPGSSNYRVTFCP 227          
BLAST of FC920699 vs. ExPASy Swiss-Prot
Match: THM1_THADA (Thaumatin-1 OS=Thaumatococcus daniellii PE=1 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 3.287e-64
Identity = 114/208 (54.81%), Postives = 144/208 (69.23%), Query Frame = 3
Query:  111 AKFDITNNCPDTVWAAAVPG------GGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVP-GGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSIFTCPTGTDYKVVFCP 713
            A F+I N C  TVWAAA  G      GGRQL+ G++WTI  EPGT   +IWART C FD SG G C+TGDC GLL C+ +G  P TLAE++L Q+   D+ID+SNI GFNVPM FS  +  C R ++C A+I+G+CP +LK P GGCN  C VF+T EYCC +G CGPT +S+FFK  CPD +SY  D  T++ TCP  ++Y+V FCP
Sbjct:    1 ATFEIVNRCSYTVWAAASKGDAALDAGGRQLNSGESWTINVEPGTNGGKIWARTDCYFDDSGSGICKTGDCGGLLRCKRFGRPPTTLAEFSLNQYG-KDYIDISNIKGFNVPMNFSPTTRGC-RGVRCAADIVGQCPAKLKAPGGGCNDACTVFQTSEYCCTTGKCGPTEYSRFFKRLCPDAFSYVLDKPTTV-TCPGSSNYRVTFCP 205          
BLAST of FC920699 vs. ExPASy Swiss-Prot
Match: PRR3_JUNAS (Pathogenesis-related protein OS=Juniperus ashei PE=1 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 8.096e-63
Identity = 111/203 (54.68%), Postives = 136/203 (67.00%), Query Frame = 3
Query:  114 KFDITNNCPDTVWAAAVPGGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSG---NCGPTGFSKFFKDRCPDVYSYPKDDATSIFTCPTGTDYKVVFCP 713
            KFDI N C  TVWAA +PGGG++LD+GQTWT+    GT +AR W RT C FDASGKG C+TGDC G L C   GA P TLAEY     +D D+ D+S +DGFN+P+  +  +  C     C A+I   CP+ELKV GGCN  C VFKTD+YCC +    NC  T +SK FK++CP  YSY KDD T+ F C +GTDY +VFCP
Sbjct:   28 KFDIKNQCGYTVWAAGLPGGGKRLDQGQTWTVNLAAGTASARFWGRTGCTFDASGKGSCQTGDCGGQLSCTVSGAVPATLAEYTQ---SDQDYYDVSLVDGFNIPLAINPTNAQCT-APACKADINAVCPSELKVDGGCNSACNVFKTDQYCCRNAYVDNCPATNYSKIFKNQCPQAYSYAKDD-TATFACASGTDYSIVFCP 225          
BLAST of FC920699 vs. ExPASy Swiss-Prot
Match: PR5_ARATH (Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.099e-43
Identity = 97/221 (43.89%), Postives = 121/221 (54.75%), Query Frame = 3
Query:  108 AAKFDITNNCPDTVWAAAVPG-------GGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEF--SSVSPSCNRVIKCTANILGECPNELKVPG-----GCNGPCPVFKTDEYCCNSGN-----CGPTGFSKFFKDRCPDVYSYPKDDATSIFTCPTGTDYKVVFCP 713
            A  F + NNCP TVWA  + G       GG +L  G +  +TA  G  + R WART C FDASG G+C TGDC G L C G G  P TLAE+ L      DF D+S +DG+NV +    S  S  C +   C +++   CP+ LKV        C   C  F TD+YCC   N     C PT +S+ FK+ CPD YSY  DD TS FTC TG +Y++ FCP
Sbjct:   23 ATDFTLRNNCPTTVWAGTLAGQGPKLGDGGFELTPGASRQLTAPAGW-SGRFWARTGCNFDASGNGRCVTGDCGG-LRCNGGGVPPVTLAEFTLVGDGGKDFYDVSLVDGYNVKLGIRPSGGSGDC-KYAGCVSDLNAACPDMLKVMDQNNVVACKSACERFNTDQYCCRGANDKPETCPPTDYSRIFKNACPDAYSYAYDDETSTFTC-TGANYEITFCP 239          
BLAST of FC920699 vs. ExPASy Swiss-Prot
Match: TLP1_PYRPY (Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1 PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 7.373e-40
Identity = 90/226 (39.82%), Postives = 119/226 (52.65%), Query Frame = 3
Query:  105 HAAKFDITNNCPDTVWAAAVPGGGR--------QLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDC-NGLLECQGYGAAPN-TLAEYALKQFNDMDFIDMSNIDGFNVPMEFS--SVSPSCNRVIKCTANILGECPNELKVPG------GCNGPCPVFKTDEYCCNSG-----NCGPTGFSKFFKDRCPDVYSYPKDDATSIFTCPTGTDYKVVFCP 713
            ++AKF  TN CP+TVW   + GGG         +L  G + ++T +    + R W R+ C  D+SGK KC TGDC +G + C G GA+P  +L E  L      DF D+S +DGFN+P++ +    S  CN    C ANI   CP EL   G      GC   C      +YCC         C PT FSK FK++CP  YSY  DD +S FTC  G +Y++ FCP
Sbjct:   21 YSAKFTFTNKCPNTVWPGTLTGGGGPQLLSTGFELASGASTSLTVQ-APWSGRFWGRSHCSIDSSGKFKCSTGDCGSGQISCNGAGASPPASLVELTLATNGGQDFYDVSLVDGFNLPIKLAPRGGSGDCNST-SCAANINTVCPAELSDKGSDGSVIGCKSACLALNQPQYCCTGAYGTPDTCPPTDFSKVFKNQCPQAYSYAYDDKSSTFTCFGGPNYEITFCP 244          
BLAST of FC920699 vs. ExPASy Swiss-Prot
Match: TP1A_MALDO (Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.302e-36
Identity = 88/228 (38.60%), Postives = 114/228 (50.00%), Query Frame = 3
Query:  105 HAAKFDITNNCPDTVWAAAVPGG--------GRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDC-NGLLECQGYGAAPN-TLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCN----RVIKCTANILGECPNELKVPGG------CNGPCPVFKTDEYCCNSGN-----CGPTGFSKFFKDRCPDVYSYPKDDATSIFTCPTGTDYKVVFCP 713
            HAAK   TNNCP+TVW   + G         G +L    + ++ A P   + R W RT+C  DA+GK  CET DC +G + C G GA P  TL E  +      D+ D+S +DGFN+PM   SV+P       +   C AN+   CP  L+V         C   C  F   +YCC   N     C PT +S+ F+ +CP  YSY  DD  S FTC  G DY + FCP
Sbjct:   23 HAAKITFTNNCPNTVWPGTLTGDQKPQLSLTGFELASKASRSVDA-PSPWSGRFWGRTRCSTDAAGKFTCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPM---SVAPQGGTGECKPSSCPANVNKVCPAPLQVKAADGSVISCKSACLAFGDSKYCCTPPNNTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFCP 246          
The following BLAST results are available for this feature:
BLAST of FC920699 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
NP24_SOLLC9.850e-7762.32Protein NP24 OS=Solanum lycopersicum PE=1 SV=2[more]
IAAT_MAIZE2.866e-7663.11Alpha-amylase/trypsin inhibitor OS=Zea mays PE=1 S... [more]
OS35_SOLCO3.169e-7561.58Osmotin-like protein OSML15 OS=Solanum commersonii... [more]
OLPA_TOBAC5.405e-7561.58Osmotin-like protein OS=Nicotiana tabacum GN=OLPA ... [more]
THM2_THADA7.823e-6655.50Thaumatin-2 OS=Thaumatococcus daniellii PE=2 SV=1[more]
THM1_THADA3.287e-6454.81Thaumatin-1 OS=Thaumatococcus daniellii PE=1 SV=1[more]
PRR3_JUNAS8.096e-6354.68Pathogenesis-related protein OS=Juniperus ashei PE... [more]
PR5_ARATH1.099e-4343.89Pathogenesis-related protein 5 OS=Arabidopsis thal... [more]
TLP1_PYRPY7.373e-4039.82Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1... [more]
TP1A_MALDO1.302e-3638.60Thaumatin-like protein 1a OS=Malus domestica GN=TL... [more]

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Properties
Property NameValue
Genbank descriptionC32011H07EF RVDevelop1 Citrus clementina cDNA clone C32011H07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920699 ID=FC920699; Name=FC920699; organism=Citrus clementina; type=EST; length=747bp
GAAACTTATCTATTTTCATATTCATTATCCTCTCCAAAATGAAGTTCGTT
AAAGCTCTTCCCATTCCTTCTGCTCTTCTTATTATCATTTCCATCACCCT
GACTCATGCTGCCAAATTCGATATCACAAACAATTGCCCCGACACCGTCT
GGGCCGCCGCTGTGCCCGGAGGCGGCAGGCAACTCGACAAGGGTCAAACA
TGGACCATCACCGCCGAGCCAGGCACAAAAGCAGCCCGCATTTGGGCTCG
AACCAAATGCCAGTTTGATGCTTCCGGCAAAGGCAAATGCGAGACCGGTG
ACTGTAACGGACTCCTCGAGTGCCAAGGCTACGGTGCAGCACCTAACACC
TTGGCCGAGTACGCGTTGAAGCAATTCAATGACATGGATTTCATTGACAT
GTCCAACATTGACGGATTCAATGTTCCCATGGAATTTAGCTCTGTCTCTC
CCTCATGCAACCGCGTGATCAAGTGCACTGCTAACATTCTTGGCGAGTGC
CCGAATGAATTGAAGGTTCCTGGAGGATGTAACGGGCCGTGCCCCGTGTT
CAAGACCGACGAGTACTGTTGCAATTCAGGCAACTGCGGACCTACAGGTT
TCTCCAAGTTTTTCAAGGATAGGTGCCCGGATGTTTACAGTTACCCTAAG
GATGACGCTACCAGCATATTTACTTGCCCGACTGGGACAGACTACAAGGT
TGTATTCTGCCCCTGAAGCATTTTTTTTCAGGGGTAGAAATGGAATA
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