FC920699

Overview
NameFC920699
Unique NameFC920699
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length747
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14178 contig Ccv1_Contig14178:1..747. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920699 vs. ExPASy Swiss-Prot
Match: TLP2_PRUPE (Thaumatin-like protein 2 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.455e-35
Identity = 90/226 (39.82%), Postives = 113/226 (50.00%), Query Frame = 3
Query:  105 HAAKFDITNNCPDTVWAAAVPGGGRQLDK------GQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCN-GLLECQGY-GAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCN----RVIKCTANILGECPNELKVPGG------CNGPCPVFKTDEYCCN-----SGNCGPTGFSKFFKDRCPDVYSYPKDDATSIFTCPTGTDYKVVFCP 713
            HAA     NNCP TVW A+   G  QL         Q       P   + R WART+C  DASGK  CET DC+ G L C G  G  P TLAE+ +      DF D+S +DGFN+PM   SV+P       ++  C AN+   CP+EL+  G       C   C  F   +YCC         C PT +S+ F ++CPD YSY  DD   +FTC  G +Y + FCP
Sbjct:   22 HAATMSFKNNCPYTVWPASF--GNPQLSTTGFELASQASFQLDTPVPWSGRFWARTRCSTDASGKFVCETADCDSGQLMCNGKTGIPPATLAEFTIAAGGGQDFYDVSLVDGFNLPM---SVTPQGGTGTCKMGSCAANVNLVCPSELQKIGSDGSVVACLSACVKFGEPQYCCTPPQETKEKCPPTNYSQIFHEQCPDAYSYAFDDNKGLFTCSGGPNYLITFCP 242          
BLAST of FC920699 vs. ExPASy Swiss-Prot
Match: TLP1_CASSA (Thaumatin-like protein 1 OS=Castanea sativa GN=TL1 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.591e-34
Identity = 83/225 (36.89%), Postives = 113/225 (50.22%), Query Frame = 3
Query:  105 HAAKFDITNNCPDTVWAAAV--------PGGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCN-GLLECQGYGAAPN-TLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCN-RVIKCTANILGECPNELKVPGG------CNGPCPVFKTDEYCCNSG-----NCGPTGFSKFFKDRCPDVYSYPKDDATSIFTCPTGTDYKVVFCP 713
            H+AK   TNNCP T+W   +        P  G  L    + T+  +   K  R WART+C  + SGK  CET DC+ G + C G GA P  +L E  +     MDF D+S +DG+N+P+  ++   + + +   C AN+   CP EL+V G       C   C  F   +YCC         C  T +S+ FK +CP  YSY  DD+TS FTC    DY + FCP
Sbjct:   21 HSAKITFTNNCPRTIWPGTLTSDQKPQLPNTGFVLASKASLTLGVQAPWKG-RFWARTRCTTN-SGKFTCETADCSTGQVACNGNGAIPPASLVEINIAANRGMDFYDVSLVDGYNLPVSVATRGGTGDCKATSCRANVNAVCPAELQVKGSDASVLACKSACTAFNQPQYCCTGAFDTARTCPATKYSRIFKQQCPQAYSYAYDDSTSTFTCSGAPDYVITFCP 243          
BLAST of FC920699 vs. ExPASy Swiss-Prot
Match: TLP_PRUAV (Glucan endo-1,3-beta-glucosidase OS=Prunus avium PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.714e-34
Identity = 90/231 (38.96%), Postives = 111/231 (48.05%), Query Frame = 3
Query:  105 HAAKFDITNNCPDTVWAAAVPGGGRQLDKGQTWTITAEPGTKAA-----------RIWARTKCQFDASGKGKCETGDC-NGLLECQGYGAAPN-TLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCN----RVIKCTANILGECPNELKVPGG------CNGPCPVFKTDEYCCNSGN-----CGPTGFSKFFKDRCPDVYSYPKDDATSIFTCPTGTDYKVVFCP 713
            HAA     NNCP  VW    PG      K Q  T   E  ++A+           R WART C  DASGK  C T DC +G + C G GA P  TLAE+ +      DF D+S +DGFN+PM   SV+P       +   C AN+   CP+EL+  G       C   C  F T +YCC         C PT +S+ F + CPD YSY  DD    FTC  G +Y + FCP
Sbjct:   22 HAATISFKNNCPYMVW----PGTLTSDQKPQLSTTGFELASQASFQLDTPVPWNGRFWARTGCSTDASGKFVCATADCASGQVMCNGNGAIPPATLAEFNIPAGGGQDFYDVSLVDGFNLPM---SVTPQGGTGDCKTASCPANVNAVCPSELQKKGSDGSVVACLSACVKFGTPQYCCTPPQNTPETCPPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFCP 245          
BLAST of FC920699 vs. ExPASy Swiss-Prot
Match: TLP1_PRUPE (Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.031e-33
Identity = 88/228 (38.60%), Postives = 111/228 (48.68%), Query Frame = 3
Query:  105 HAAKFDITNNCPDTVWAAAVPGG--------GRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDC-NGLLECQGYGAAPN-TLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCN----RVIKCTANILGECPNELKVPGG------CNGPCPVFKTDEYCCNSGN-----CGPTGFSKFFKDRCPDVYSYPKDDATSIFTCPTGTDYKVVFCP 713
            HAAK   TN C  TVW   + G         G +L  G + ++ A P   + R + RT+C  DASGK  C T DC +G + C G GAAP  TL E  +      DF D+S +DGFN+PM   SV+P       +   C A+I   CP  L+V G       C   C  F   +YCC   N     C P  +SK FK +CP  YSY  DD +S FTC     Y + FCP
Sbjct:   23 HAAKITFTNKCSYTVWPGTLTGDQKPQLSLTGFELATGISRSVDA-PSPWSGRFFGRTRCSTDASGKFTCATADCGSGQVSCNGNGAAPPATLVEITIASNGGQDFYDVSLVDGFNLPM---SVAPQGGTGKCKASTCPADINKVCPAPLQVKGSDGSVIACKSACLAFNQPKYCCTPPNDKPETCPPPDYSKLFKTQCPQAYSYAYDDKSSTFTCSGRPAYLITFCP 246          
BLAST of FC920699 vs. ExPASy Swiss-Prot
Match: TLP_ORYSJ (Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os12g0628600 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.659e-32
Identity = 79/204 (38.73%), Postives = 97/204 (47.55%), Query Frame = 3
Query:  105 HAAKFDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSIFTCPTGTDYKVVFCP 713
            +AA F ITN C  TVW AA P GGG QL  GQTWTI    GT + R+W RT C FD SG+G C TGDC G L C   G  P TLAE+ +      DF D+S IDG+NV M FS           C++ +   C +                                      RCPD Y +P+D+ T    C   ++Y+VVFCP
Sbjct:   25 NAATFTITNRCSFTVWPAATPVGGGVQLSPGQTWTINVPAGTSSGRVWGRTGCSFDGSGRGSCATGDCAGALSCTLSGQKPLTLAEFTIG--GSQDFYDLSVIDGYNVAMSFS-----------CSSGVTVTCRD-------------------------------------SRCPDAYLFPEDN-TKTHACSGNSNYQVVFCP 177          
BLAST of FC920699 vs. ExPASy Swiss-Prot
Match: OLP1_SOLLC (Osmotin-like protein OS=Solanum lycopersicum PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.646e-31
Identity = 81/223 (36.32%), Postives = 115/223 (51.57%), Query Frame = 3
Query:  123 ITNNCPDTVWAAAVPGGGRQ-LDKG----QTWTITAEPGTKA---ARIWARTKCQFDASGKGKCETGDCNGLLECQGYG-AAPNTLAEYALKQFN-DMDFIDMSNIDGFNVPMEFSSVSPSCNR----VIKCTANILGECPNELKVPG--------GCNGPCPVFKTDEYCCNSG-----NCGPTGFSKFFKDRCPDVYSYPKDDATSIFTCPTGTDYKVVFC 710
            + NNCP T+W A  P  G   L++G     + T  + P   A    RIWART C +   GK  C TGDC G +EC G G AAP TLA++ L   + D     +S +DGFN+P+   +V+P   +    V+ C AN+L  CP  L+           GC   C  FK+DE+CC +       C P+ +S+FFK  CP  ++Y  D  + +  C +  + KV+FC
Sbjct:   33 LVNNCPYTIWPAIQPNAGHPVLERGGFTLHSLTHRSFPAPNAHWSGRIWARTGCNYQ-HGKFYCATGDCGGRIECDGLGGAAPATLAQFVLHHGHADFSTYGVSLVDGFNIPL---TVTPHEGKGVCPVVGCRANLLESCPAVLQFRSHGGHGPVVGCKSACEAFKSDEFCCRNHYNSPQTCKPSSYSQFFKHACPATFTYAHDSPSLMHECSSPRELKVIFC 251          
BLAST of FC920699 vs. ExPASy Swiss-Prot
Match: TLPH_ARATH (Thaumatin-like protein OS=Arabidopsis thaliana GN=At1g18250 PE=2 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 2.808e-31
Identity = 82/217 (37.79%), Postives = 104/217 (47.93%), Query Frame = 3
Query:  129 NNCPDTVWAAAVPGGGRQLDKGQTWTITAE-------PGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGA-APNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSV--SPSCNRVIKCTANILGECPNELKVPG-------GCNGPCPVFKTDEYCC-----NSGNCGPTGFSKFFKDRCPDVYSYPKDDATSIFTCPTGTDYKVVFCP 713
            N C   VW    P  G+ L  G  + + A        P   + R W R  C FD SG+G C TGDC G L C G G   P TLAE  L    ++DF D+S +DG+N+ M    V  S  C+    C +++   CP  L+V          C   C  F + +YCC     N  +C PT +SK FK  CP  YSY  DD TSI TC +  +Y V FCP
Sbjct:   27 NKCKHPVWPGIQPSAGQNLLAGGGFKLPANKAHSLQLPPLWSGRFWGRHGCTFDRSGRGHCATGDCGGSLSCNGAGGEPPATLAEITLGP--ELDFYDVSLVDGYNLAMSIMPVKGSGQCS-YAGCVSDLNQMCPVGLQVRSRNGKRVVACKSACSAFNSPQYCCTGLFGNPQSCKPTAYSKIFKVACPKAYSYAYDDPTSIATC-SKANYIVTFCP 239          
BLAST of FC920699 vs. ExPASy Swiss-Prot
Match: TP1B_MALDO (Thaumatin-like protein 1b (Fragment) OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.067e-30
Identity = 78/216 (36.11%), Postives = 106/216 (49.07%), Query Frame = 3
Query:  141 DTVWAAAVPGGGR--------QLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDC-NGLLECQGYGAAPN-TLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCN----RVIKCTANILGECPNELKVPGG------CNGPCPVFKTDEYCCNSGN-----CGPTGFSKFFKDRCPDVYSYPKDDATSIFTCPTGTDYKVVFCP 713
            +TVW   + G  +        +L    + ++ A P   + R W RT+C  DA+GK  CET DC +G + C G GA P  TL E  +      D+ D+S +DGFN+PM   SV+P       +   C AN+   CP +L+V         C   C  F   +YCC   N     C PT +S+ F+ +CP  YSY  DD  S FTC  G DY + FCP
Sbjct:    1 NTVWPGTLTGDQKPQLSLTAFELASKASQSVDA-PSPWSGRFWGRTRCSTDAAGKFSCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPM---SVAPQGGTGECKPSSCPANVNMACPAQLQVKAADGSVISCKSACLAFGDSKYCCTPPNDTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFCP 212          
BLAST of FC920699 vs. ExPASy Swiss-Prot
Match: TLPH_ORYSJ (Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os11g0706600 PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.433e-29
Identity = 78/219 (35.62%), Postives = 103/219 (47.03%), Query Frame = 3
Query:  123 ITNNCPDTVWAAAV--------PGGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQG-YGAAPNTLAEYAL-KQFNDMDFIDMSNIDGFNVPMEFSSVSPSCN-RVIKCTANILGECPNELKV------PGGCNGPCPVFKTDEYCC-----NSGNCGPTGFSKFFKDRCPDVYSYPKDDATSIFTCPTGTDYKVVFCP 713
            + NNC ++VW   +          GG  L  G+   +    G  + R+W R  C FD+ G+G C TGDC G+L C G  GA P T+ E  L    + M F D+S +DGFN P+  ++V          C A++   CP+ L+V        GC   C     D YCC     +   C PT FS  FK  CP  YSY  DDATS+  C     Y + FCP
Sbjct:   33 MVNNCGESVWPGLLGTAGHPTPQSGGFHLGAGEEAALEVPAGW-SGRVWPRRGCSFDSRGRGSCATGDCGGVLRCNGAAGATPATVVEMTLGTSASAMHFYDVSLVDGFNAPVSMAAVGGGVGCGTAACGADVNVCCPSALEVRDREGRVAGCRSACRAMGGDRYCCTGDYASPSACRPTIFSHLFKAICPRAYSYAYDDATSLNRC-HAKRYLITFCP 249          
BLAST of FC920699 vs. ExPASy Swiss-Prot
Match: PR1C_HORVU (Pathogenesis-related protein 1C OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.442e-27
Identity = 74/203 (36.45%), Postives = 94/203 (46.31%), Query Frame = 3
Query:  108 AAKFDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSIFTCPTGTDYKVVFCP 713
            AA F+I NNC  T+W A +P GGG +L  GQT +I    GT+A RIWART C F+  G G C+TGDC G L C   G  P TLAE+ +   +  DF D+S IDGFN+ M+FS           C+                          D   C   +C P           P  Y +P D AT    C    +Y++ FCP
Sbjct:   20 AATFNIKNNCGSTIWPAGIPVGGGFELGSGQTSSINVPAGTQAGRIWARTGCSFNG-GSGSCQTGDCGGQLSCSLSGRPPATLAEFTIGGGSTQDFYDISVIDGFNLAMDFS-----------CSTG------------------------DALQCRDPSCPP-----------PQAYQHPNDVAT--HACSGNNNYQITFCP 173          
The following BLAST results are available for this feature:
BLAST of FC920699 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
TLP2_PRUPE2.455e-3539.82Thaumatin-like protein 2 OS=Prunus persica PE=2 SV... [more]
TLP1_CASSA1.591e-3436.89Thaumatin-like protein 1 OS=Castanea sativa GN=TL1... [more]
TLP_PRUAV2.714e-3438.96Glucan endo-1,3-beta-glucosidase OS=Prunus avium P... [more]
TLP1_PRUPE1.031e-3338.60Thaumatin-like protein 1 OS=Prunus persica PE=2 SV... [more]
TLP_ORYSJ5.659e-3238.73Thaumatin-like protein OS=Oryza sativa subsp. japo... [more]
OLP1_SOLLC1.646e-3136.32Osmotin-like protein OS=Solanum lycopersicum PE=1 ... [more]
TLPH_ARATH2.808e-3137.79Thaumatin-like protein OS=Arabidopsis thaliana GN=... [more]
TP1B_MALDO1.067e-3036.11Thaumatin-like protein 1b (Fragment) OS=Malus dome... [more]
TLPH_ORYSJ3.433e-2935.62Thaumatin-like protein OS=Oryza sativa subsp. japo... [more]
PR1C_HORVU1.442e-2736.45Pathogenesis-related protein 1C OS=Hordeum vulgare... [more]

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Properties
Property NameValue
Genbank descriptionC32011H07EF RVDevelop1 Citrus clementina cDNA clone C32011H07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920699 ID=FC920699; Name=FC920699; organism=Citrus clementina; type=EST; length=747bp
GAAACTTATCTATTTTCATATTCATTATCCTCTCCAAAATGAAGTTCGTT
AAAGCTCTTCCCATTCCTTCTGCTCTTCTTATTATCATTTCCATCACCCT
GACTCATGCTGCCAAATTCGATATCACAAACAATTGCCCCGACACCGTCT
GGGCCGCCGCTGTGCCCGGAGGCGGCAGGCAACTCGACAAGGGTCAAACA
TGGACCATCACCGCCGAGCCAGGCACAAAAGCAGCCCGCATTTGGGCTCG
AACCAAATGCCAGTTTGATGCTTCCGGCAAAGGCAAATGCGAGACCGGTG
ACTGTAACGGACTCCTCGAGTGCCAAGGCTACGGTGCAGCACCTAACACC
TTGGCCGAGTACGCGTTGAAGCAATTCAATGACATGGATTTCATTGACAT
GTCCAACATTGACGGATTCAATGTTCCCATGGAATTTAGCTCTGTCTCTC
CCTCATGCAACCGCGTGATCAAGTGCACTGCTAACATTCTTGGCGAGTGC
CCGAATGAATTGAAGGTTCCTGGAGGATGTAACGGGCCGTGCCCCGTGTT
CAAGACCGACGAGTACTGTTGCAATTCAGGCAACTGCGGACCTACAGGTT
TCTCCAAGTTTTTCAAGGATAGGTGCCCGGATGTTTACAGTTACCCTAAG
GATGACGCTACCAGCATATTTACTTGCCCGACTGGGACAGACTACAAGGT
TGTATTCTGCCCCTGAAGCATTTTTTTTCAGGGGTAGAAATGGAATA
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