FC920701
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920701 vs. ExPASy Swiss-Prot
Match: RL4_CLOBH (50S ribosomal protein L4 OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=rplD PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.713e-11 Identity = 37/74 (50.00%), Postives = 47/74 (63.51%), Query Frame = 3 Query: 447 IPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGNWKKPWRQKGTGRAR 659 +P + FN E G + LA VF V + +H+VV+ LA ++QGT S KT +EVSG KPWRQKGTGRAR Sbjct: 1 MPKVDLFNQNGEKVGDLQLADSVFGVEVNTYAMHQVVKALLANKRQGTQSAKTRAEVSGGGIKPWRQKGTGRAR 74
BLAST of FC920701 vs. ExPASy Swiss-Prot
Match: RL4_CLOB6 (50S ribosomal protein L4 OS=Clostridium botulinum (strain 657 / Type Ba4) GN=rplD PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.713e-11 Identity = 37/74 (50.00%), Postives = 47/74 (63.51%), Query Frame = 3 Query: 447 IPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGNWKKPWRQKGTGRAR 659 +P + FN E G + LA VF V + +H+VV+ LA ++QGT S KT +EVSG KPWRQKGTGRAR Sbjct: 1 MPKVDLFNQNGEKVGDLQLADSVFGVEVNTYAMHQVVKALLANKRQGTQSAKTRAEVSGGGIKPWRQKGTGRAR 74
BLAST of FC920701 vs. ExPASy Swiss-Prot
Match: RL4_CLOB1 (50S ribosomal protein L4 OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=rplD PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.713e-11 Identity = 37/74 (50.00%), Postives = 47/74 (63.51%), Query Frame = 3 Query: 447 IPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGNWKKPWRQKGTGRAR 659 +P + FN E G + LA VF V + +H+VV+ LA ++QGT S KT +EVSG KPWRQKGTGRAR Sbjct: 1 MPKVDLFNQNGEKVGDLQLADSVFGVEVNTYAMHQVVKALLANKRQGTQSAKTRAEVSGGGIKPWRQKGTGRAR 74
BLAST of FC920701 vs. ExPASy Swiss-Prot
Match: RL4_DESVM (50S ribosomal protein L4 OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=rplD PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.461e-11 Identity = 34/72 (47.22%), Postives = 49/72 (68.06%), Query Frame = 3 Query: 444 VIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGNWKKPWRQKGTGRAR 659 V+ V + ++ G + LA +VF+V ++ +I++ VVR A + GTH+TKT + VSG KPWRQKGTGRAR Sbjct: 3 VVKVYDQNKKEAGELTLAPEVFEVEVKPEILNLVVRAHRAGLRSGTHATKTRAFVSGGGAKPWRQKGTGRAR 74
BLAST of FC920701 vs. ExPASy Swiss-Prot
Match: RL4_CLOBK (50S ribosomal protein L4 OS=Clostridium botulinum (strain Okra / Type B1) GN=rplD PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.461e-11 Identity = 37/74 (50.00%), Postives = 47/74 (63.51%), Query Frame = 3 Query: 447 IPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGNWKKPWRQKGTGRAR 659 +P + FN E G + LA VF V + +H+VV+ LA ++QGT S KT +EVSG KPWRQKGTGRAR Sbjct: 1 MPKIDLFNQNGEKVGDLQLADSVFGVEVNTYAMHQVVKALLANKRQGTQSAKTRAEVSGGGIKPWRQKGTGRAR 74
BLAST of FC920701 vs. ExPASy Swiss-Prot
Match: RL4_EUBE2 (50S ribosomal protein L4 OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=rplD PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.744e-11 Identity = 34/71 (47.89%), Postives = 44/71 (61.97%), Query Frame = 3 Query: 447 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGNWKKPWRQKGTGRAR 659 + V N ++ G + L VF V + + ++H V QLA +QGT S KT SEVSG +KPWRQKGTG AR Sbjct: 4 VSVYNIEGKEVGSIELNDAVFGVEVNEHLVHMAVVNQLANNRQGTQSAKTRSEVSGGGRKPWRQKGTGHAR 74
BLAST of FC920701 vs. ExPASy Swiss-Prot
Match: RL4_COREF (50S ribosomal protein L4 OS=Corynebacterium efficiens GN=rplD PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.744e-11 Identity = 34/74 (45.95%), Postives = 47/74 (63.51%), Query Frame = 3 Query: 438 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGNWKKPWRQKGTGRAR 659 +L + V G + L ++FD + ++H+VV QLA +QGTHSTKT +EV G +KP+RQKGTGRAR Sbjct: 3 NLTLDVQTAEGTTNGSVDLPAEIFDREVSVALLHQVVNAQLAAARQGTHSTKTRAEVRGGGRKPFRQKGTGRAR 76
BLAST of FC920701 vs. ExPASy Swiss-Prot
Match: RL4_CLOBB (50S ribosomal protein L4 OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=rplD PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.744e-11 Identity = 35/74 (47.30%), Postives = 47/74 (63.51%), Query Frame = 3 Query: 447 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGNWKKPWRQKGTGRAR 659 +P FN++ G + L +VF+V + K +H+VV LA ++QGT S KT +EV G KPWRQKGTGRAR Sbjct: 1 MPTVGLFNQEGKQVGDIQLNANVFEVEVNKHALHQVVVALLANKRQGTQSAKTRTEVRGGGIKPWRQKGTGRAR 74
BLAST of FC920701 vs. ExPASy Swiss-Prot
Match: RL4_CLOBA (50S ribosomal protein L4 OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=rplD PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.744e-11 Identity = 35/74 (47.30%), Postives = 47/74 (63.51%), Query Frame = 3 Query: 447 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGNWKKPWRQKGTGRAR 659 +P FN++ G + L +VF+V + K +H+VV LA ++QGT S KT +EV G KPWRQKGTGRAR Sbjct: 1 MPTVGLFNQEGKQVGDIQLNANVFEVEVNKHALHQVVVALLANKRQGTQSAKTRTEVRGGGIKPWRQKGTGRAR 74
BLAST of FC920701 vs. ExPASy Swiss-Prot
Match: RL4_AYWBP (50S ribosomal protein L4 OS=Aster yellows witches'-broom phytoplasma (strain AYWB) GN=rplD PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.744e-11 Identity = 35/74 (47.30%), Postives = 47/74 (63.51%), Query Frame = 3 Query: 447 IPVTNFFNEDKGFM---VLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGNWKKPWRQKGTGRAR 659 +P N N+ + VLA VFD+ + +++ VV Q A +QGTH+TKT + V+G KKPWRQKGTGRAR Sbjct: 1 MPKINILNQQGDLVSEKVLATTVFDIKPNQQVLYDVVNAQRAAMRQGTHATKTRALVAGGGKKPWRQKGTGRAR 74 The following BLAST results are available for this feature:
BLAST of FC920701 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 101
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920701 ID=FC920701; Name=FC920701; organism=Citrus clementina; type=EST; length=660bpback to top |