FC920703
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920703 vs. ExPASy Swiss-Prot
Match: ODPB_CHLAT (Pyruvate dehydrogenase E1 component subunit beta OS=Chlorokybus atmophyticus GN=pdhB PE=3 SV=1) HSP 1 Score: 292.352 bits (747), Expect = 9.188e-79 Identity = 140/223 (62.78%), Postives = 174/223 (78.03%), Query Frame = 2 Query: 14 FPFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKG 682 F FEAL++ ++EEM+R+ V ++GED+GHYGGSYKVT+GL KYG RV+DTPIAE SF G +GAA TGL P+VEGMNM F+LLA++QISNN GML TSGG F QLGAEHSQRLESYFQS+PG+Q+V CSTPYNAKGL+K+AIRS+NP++ EHVLLYNLK +PD +Y+ LE+AE+VR G +T+LTYSR RY+V+QA K LV +G Sbjct: 5 FLFEALQKAIDEEMEREKRVVLIGEDIGHYGGSYKVTQGLYGKYGKHRVIDTPIAEYSFVGAAVGAAATGLIPVVEGMNMAFILLAYSQISNNMGMLCATSGGHFQVPMVLRGPGGIGKQLGAEHSQRLESYFQSVPGLQIVTCSTPYNAKGLLKSAIRSKNPILFIEHVLLYNLKGEVPDNDYLLPLEKAELVREGSDITVLTYSRQRYNVIQAVKVLVEEG 227 HSP 2 Score: 23.0978 bits (48), Expect = 9.188e-79 Identity = 8/10 (80.00%), Postives = 10/10 (100.00%), Query Frame = 1 Query: 673 KQGYDPEVID 702 ++GYDPEVID Sbjct: 225 EEGYDPEVID 234
BLAST of FC920703 vs. ExPASy Swiss-Prot
Match: ODPB_DICDI (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Dictyostelium discoideum GN=pdhB PE=1 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.372e-45 Identity = 92/225 (40.89%), Postives = 142/225 (63.11%), Query Frame = 2 Query: 23 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYN----LKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGM 685 +A+ L+EE+ RD V +MGE+V Y G+YK+TKGL DKYG R++DTPI E F G+G+GAAM G RPI+E M F + A + I N+ HY SGG+ +GA+HSQ +++ S+PG+++VA + + +GL+K+AIR +NPV+ E LLYN L ++ D+EY+ + +A++ R G+ VTI+ +SR+ + M+AA+ L +G+ Sbjct: 33 DAINSALDEELARDEKVFIMGEEVAQYNGAYKITKGLFDKYGGDRIIDTPITEAGFAGIGVGAAMAGTRPIIEFMTFNFAMQAIDHIINSSAKTHYMSGGKVFNPIVWRGPNGPPTAVGAQHSQCFAAWYGSVPGLKVVAPWSAADHRGLLKSAIRDDNPVVYLESELLYNYKFDLSDQEQDKEYLVPIGKAKVEREGKDVTIVGFSRIVSNCMEAAEILAKEGI 257
BLAST of FC920703 vs. ExPASy Swiss-Prot
Match: ODPB_ZYMMO (Pyruvate dehydrogenase E1 component subunit beta OS=Zymomonas mobilis GN=pdhB PE=3 SV=2) HSP 1 Score: 177.563 bits (449), Expect = 5.844e-44 Identity = 91/222 (40.99%), Postives = 140/222 (63.06%), Query Frame = 2 Query: 23 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKERIPD-EEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGM 685 EALR+ + EEM RD V VMGE+V Y G+YKVT+GL ++G RV+DTPI+E F+G+G+GAAM GLRP++E M M F + A + I N+ HY SGGQ ++GA+H+Q ++ ++PG+ ++A +AKGL+KAAIRS++PV+ E LLY +P ++++ + +A ++R G+ VTI++YS + AA+ L +G+ Sbjct: 143 EALRDAMAEEMRRDDRVFVMGEEVAEYQGAYKVTQGLLQEFGARRVVDTPISEYGFSGIGVGAAMEGLRPVIEFMTMNFSMQAIDHIINSAAKTHYMSGGQVRCPIVFRGPNGAAPRVGAQHTQNFGPWYAAVPGLVVLAPYDAIDAKGLLKAAIRSDDPVVFLECELLYGKTFDVPKMDDFVLPIGKARIIREGKDVTIVSYSIGVSFALTAAEALAKEGI 364
BLAST of FC920703 vs. ExPASy Swiss-Prot
Match: ODPB_ARATH (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Arabidopsis thaliana GN=PDH2 PE=1 SV=2) HSP 1 Score: 176.792 bits (447), Expect = 9.968e-44 Identity = 91/225 (40.44%), Postives = 138/225 (61.33%), Query Frame = 2 Query: 23 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYN----LKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGM 685 +AL ++EEM DP V VMGE+VG Y G+YK+TKGL +KYG RV DTPI E FTG+G+GAA GL+P+VE M F + A + I N+ +Y S GQ +GA+HSQ +++ S+PG++++A + +A+GL+KAAIR +PV+ E+ LLY + E D + + +A++ R G+ VTI+T+S+M ++AA+ L +G+ Sbjct: 40 DALNSAIDEEMSADPKVFVMGEEVGQYQGAYKITKGLLEKYGPERVYDTPITEAGFTGIGVGAAYAGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSAGQINVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLAPYSAEDARGLLKAAIRDPDPVVFLENELLYGESFPISEEALDSSFCLPIGKAKIEREGKDVTIVTFSKMVGFALKAAEKLAEEGI 264
BLAST of FC920703 vs. ExPASy Swiss-Prot
Match: ODBB_THET2 (2-oxoisovalerate dehydrogenase subunit beta OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=TT_C1756 PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 9.968e-44 Identity = 93/227 (40.97%), Postives = 137/227 (60.35%), Query Frame = 2 Query: 23 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY-NLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGMILRLL 700 +AL L+EEM +DP V V+GEDVG GG + VT+GL KYG RV+DTP++E + G +G A GLRP+ E ++ F+Q+ + L Y SGGQFT + G HSQ E++F G+++VA STPY+AKGL+KAAIR E+PV+ E LY ++KE +P+E+Y ++ +A + R G+ +T++ Y + V+QAA L G+ +L Sbjct: 8 QALNRALDEEMAKDPRVVVLGEDVGKRGGVFLVTEGLLQKYGPDRVMDTPLSEAAIVGAALGMAAHGLRPVAEIQFADYIFPGFDQLVSQVAKLRYRSGGQFTAPLVVRMPSGGGVRGGHHHSQSPEAHFVHTAGLKVVAVSTPYDAKGLLKAAIRDEDPVVFLEPKRLYRSVKEEVPEEDYTLSIGKAALRREGKDLTLIGYGTVMPEVLQAAAELAKAGVSAEVL 234
BLAST of FC920703 vs. ExPASy Swiss-Prot
Match: ODBB_BACSU (2-oxoisovalerate dehydrogenase subunit beta OS=Bacillus subtilis GN=bfmBAB PE=1 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.700e-43 Identity = 88/222 (39.64%), Postives = 138/222 (62.16%), Query Frame = 2 Query: 23 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNL-KERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGM 685 +A+ ++EEM+RD V V+GEDVG GG +K T GL +++G+ RV+DTP+AE++ G+GIGAAM G+RPI E F++ A NQI + + Y S ++ HSQ +E+ F + PG+++V STPY+AKGL+KAA+R E+PV+ FEH Y L K +P ++Y+ + +A++ R G+ +T++TY + +QAA+ L G+ Sbjct: 8 DAINLAMKEEMERDSRVFVLGEDVGRKGGVFKATAGLYEQFGEERVMDTPLAESAIAGVGIGAAMYGMRPIAEMQFADFIMPAVNQIISEAAKIRYRSNNDWSCPIVVRAPYGGGVHGALYHSQSVEAIFANQPGLKIVMPSTPYDAKGLLKAAVRDEDPVLFFEHKRAYRLIKGEVPADDYVLPIGKADVKREGDDITVITYGLCVHFALQAAERLEKDGI 229
BLAST of FC920703 vs. ExPASy Swiss-Prot
Match: ODBB_THET8 (2-oxoisovalerate dehydrogenase subunit beta OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=TTHA0230 PE=1 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.221e-43 Identity = 93/227 (40.97%), Postives = 136/227 (59.91%), Query Frame = 2 Query: 23 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY-NLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGMILRLL 700 +AL L+EEM +DP V V+GEDVG GG + VT+GL KYG RV+DTP++E + G +G A GLRP+ E ++ F+Q+ + L Y SGGQFT + G HSQ E++F G+++VA STPY+AKGL+KAAIR E+PV+ E LY ++KE +P+E+Y + +A + R G+ +T++ Y + V+QAA L G+ +L Sbjct: 8 QALNRALDEEMAKDPRVVVLGEDVGKRGGVFLVTEGLLQKYGPDRVMDTPLSEAAIVGAALGMAAHGLRPVAEIQFADYIFPGFDQLVSQVAKLRYRSGGQFTAPLVVRMPSGGGVRGGHHHSQSPEAHFVHTAGLKVVAVSTPYDAKGLLKAAIRDEDPVVFLEPKRLYRSVKEEVPEEDYTLPIGKAALRREGKDLTLIGYGTVMPEVLQAAAELAKAGVSAEVL 234
BLAST of FC920703 vs. ExPASy Swiss-Prot
Match: ODPB_BOVIN (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Bos taurus GN=PDHB PE=1 SV=2) HSP 1 Score: 172.94 bits (437), Expect = 1.439e-42 Identity = 86/225 (38.22%), Postives = 141/225 (62.67%), Query Frame = 2 Query: 23 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKERIPDE----EYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGM 685 EA+ +G++EE++RD V ++GE+V Y G+YKV++GL KYGD R++DTPI+E F G+ +GAAM GLRPI E M F + A +Q+ N+ +Y SGG + + A+HSQ +++ PG+++V+ + +AKGL+K+AIR NPV++ E+ L+Y + +P E +++ + +A++ R G HVTI+ +SR H ++AA L +G+ Sbjct: 37 EAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSGGLQSVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWSSEDAKGLIKSAIRDNNPVVVLENELMYGVPFELPSEAQSKDFLIPIGKAKIERQGTHVTIVAHSRPVGHCLEAATVLSKEGI 261
BLAST of FC920703 vs. ExPASy Swiss-Prot
Match: ODPB_RAT (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus GN=Pdhb PE=1 SV=2) HSP 1 Score: 169.474 bits (428), Expect = 1.591e-41 Identity = 83/225 (36.89%), Postives = 139/225 (61.78%), Query Frame = 2 Query: 23 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKERIPDE----EYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGM 685 EA+ +G++EE++RD V ++GE+V Y G+YKV++GL KYGD R++DTPI+E F G+ +GAAM GLRPI E M F + A +Q+ N+ +Y S G + A+HSQ +++ PG+++V+ +AKGL+K+AIR +NPV++ E+ L+Y + +P E +++ + +A++ R G H+T++ +SR H ++AA L +G+ Sbjct: 37 EAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSAGLQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDDNPVVMLENELMYGVAFELPTEAQSKDFLIPIGKAKIERQGTHITVVAHSRPVGHCLEAAAVLSKEGI 261
BLAST of FC920703 vs. ExPASy Swiss-Prot
Match: ODPB_RICFE (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia felis GN=pdhB PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.078e-41 Identity = 90/218 (41.28%), Postives = 128/218 (58.72%), Query Frame = 2 Query: 23 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVN 676 EALR+ ++EEM RD V VMGE+V Y G+YKVT+GL +++G RV+DTPI E F G+ +GAA GLRPIVE M F + AF+ I N+ HY SGGQ ++ A+HSQ + + +PG+++VA + + KGLM AIR +NPVI E+ +LY +P+ +A+++R G VTI+T+S + AA L N Sbjct: 7 EALRDAMQEEMIRDDKVFVMGEEVAEYQGAYKVTQGLLEQFGPKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQAKCPIVFRGPNGAASRVAAQHSQNYTACYSHVPGLKVVAPYSAEDHKGLMLTAIRDDNPVIFLENEILYGHSFDVPETIEPIPFGQAKILREGSSVTIVTFSIQVKLALDAANVLQN 224 The following BLAST results are available for this feature:
BLAST of FC920703 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920703 ID=FC920703; Name=FC920703; organism=Citrus clementina; type=EST; length=703bpback to top |