FC920703
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920703 vs. ExPASy Swiss-Prot
Match: ODPB_STAAM (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=pdhB PE=1 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.434e-36 Identity = 77/227 (33.92%), Postives = 129/227 (56.83%), Query Frame = 2 Query: 23 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY-NLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGMILRLL 700 +A+ + L+ E+ D V + GEDVG GG ++VT+GL ++G+ RV DTP+AE+ G+ +G A+ G RP++E +GF+ F+ I+ + SGG T H+ LE PG+++V S PY+AKGL+ ++IRS +PV+ EH+ LY + +E +P+EEY ++ +A + + G ++I+TY M M+AA+ L G + ++ Sbjct: 8 QAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGTKTAPVTIRSPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFREEVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEVI 234
BLAST of FC920703 vs. ExPASy Swiss-Prot
Match: ODPB_STAAC (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain COL) GN=pdhB PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.434e-36 Identity = 77/227 (33.92%), Postives = 129/227 (56.83%), Query Frame = 2 Query: 23 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY-NLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGMILRLL 700 +A+ + L+ E+ D V + GEDVG GG ++VT+GL ++G+ RV DTP+AE+ G+ +G A+ G RP++E +GF+ F+ I+ + SGG T H+ LE PG+++V S PY+AKGL+ ++IRS +PV+ EH+ LY + +E +P+EEY ++ +A + + G ++I+TY M M+AA+ L G + ++ Sbjct: 8 QAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGTKTAPVTIRGPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFREEVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEVI 234
BLAST of FC920703 vs. ExPASy Swiss-Prot
Match: ODPB_STAES (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus epidermidis (strain ATCC 12228) GN=pdhB PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 7.650e-36 Identity = 75/227 (33.04%), Postives = 131/227 (57.71%), Query Frame = 2 Query: 23 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY-NLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGMILRLL 700 +A+ + L+ E+ RD V V GEDVG GG ++VT+GL ++G+ RV DTP+AE+ G+ +G A+TG RP++E +GF+ F++++ + SGG H+ LE PG+++V S PY+AKGL+ ++I+S +PV+ EH+ LY + +E +P+EEY ++ +A + + G +T+++Y M ++AA+ L G + ++ Sbjct: 8 QAINDALKSELKRDEDVLVFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLALGLAVTGFRPVMEIQFLGFVYEVFDEVAGQIARTRFRSGGTKPAPVTIRTPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIQSNDPVVYLEHMKLYRSFREEVPEEEYKIDIGKANVKKEGNDITLISYGAMVQESLKAAEELEKDGYSVEVI 234
BLAST of FC920703 vs. ExPASy Swiss-Prot
Match: ODPB_STAEQ (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=pdhB PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 7.650e-36 Identity = 75/227 (33.04%), Postives = 131/227 (57.71%), Query Frame = 2 Query: 23 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY-NLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGMILRLL 700 +A+ + L+ E+ RD V V GEDVG GG ++VT+GL ++G+ RV DTP+AE+ G+ +G A+TG RP++E +GF+ F++++ + SGG H+ LE PG+++V S PY+AKGL+ ++I+S +PV+ EH+ LY + +E +P+EEY ++ +A + + G +T+++Y M ++AA+ L G + ++ Sbjct: 8 QAINDALKSELKRDEDVLVFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLALGLAVTGFRPVMEIQFLGFVYEVFDEVAGQIARTRFRSGGTKPAPVTIRTPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIQSNDPVVYLEHMKLYRSFREEVPEEEYKIDIGKANVKKEGNDITLISYGAMVQESLKAAEELEKDGYSVEVI 234
BLAST of FC920703 vs. ExPASy Swiss-Prot
Match: ODPB_BACST (Pyruvate dehydrogenase E1 component subunit beta OS=Bacillus stearothermophilus GN=pdhB PE=1 SV=2) HSP 1 Score: 150.214 bits (378), Expect = 9.991e-36 Identity = 77/222 (34.68%), Postives = 125/222 (56.31%), Query Frame = 2 Query: 23 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY-NLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGM 685 +A+ + L E+ DP+V + GEDVG GG ++ T+GL ++G+ RV DTP+AE+ G+ IG A+ G RP+ E GF+ + I + Y +GG++ HS LE PG+++V STPY+AKGL+ +AIR +PVI EH+ LY + ++ +P+ EY + +A++ R G+ +TI+ Y M + ++AA L +G+ Sbjct: 8 QAITDALRIELKNDPNVLIFGEDVGVNGGVFRATEGLQAEFGEDRVFDTPLAESGIGGLAIGLALQGFRPVPEIQFFGFVYEVMDSICGQMARIRYRTGGRYHMPITIRSPFGGGVHTPELHSDSLEGLVAQQPGLKVVIPSTPYDAKGLLISAIRDNDPVIFLEHLKLYRSFRQEVPEGEYTIPIGKADIKREGKDITIIAYGAMVHESLKAAAELEKEGI 229
BLAST of FC920703 vs. ExPASy Swiss-Prot
Match: ODPB_ACHLA (Pyruvate dehydrogenase E1 component subunit beta OS=Acholeplasma laidlawii GN=pdhB PE=1 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 9.991e-36 Identity = 78/227 (34.36%), Postives = 128/227 (56.39%), Query Frame = 2 Query: 23 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNL-KERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGMILRLL 700 EA+ + +++ M++D + V GED G GG ++VT GL KYG+ RV DTPIAE++ G +G A+ GL+PI E GF+ + + + + S GQFT + HS+ LE F SIPG+++V STPY+AKGL+ AAI +PV+ E +Y K+ +P E Y + +A++V+ G +T++ + + V +A K + +G+ + ++ Sbjct: 8 EAINQAIDQAMEKDESIVVFGEDAGFEGGVFRVTAGLQKKYGETRVFDTPIAESAIVGSAVGMAINGLKPIAEIQFDGFIFPGYTDLVTHAARMRNRSRGQFTVPMVLRLPHGGGIRALEHHSEALEVLFGSIPGLKVVTPSTPYDAKGLLLAAINDPDPVVFLEPKRIYRAGKQEVPAEMYEIPIGKAKVVKQGTDMTVVAWGSIVREVEKAVKLVEAEGISVEII 234
BLAST of FC920703 vs. ExPASy Swiss-Prot
Match: ACOB_BACSU (Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta OS=Bacillus subtilis GN=acoB PE=3 SV=3) HSP 1 Score: 144.821 bits (364), Expect = 4.198e-34 Identity = 84/238 (35.29%), Postives = 123/238 (51.68%), Query Frame = 2 Query: 23 EALREGLEEEMDRDPHVCVMGEDVGH------------YGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGMILRLL 700 +A+ E ++ M +D +V ++GEDV +GG VTKGL ++G RVLDTPI+E + G + AA TGLRPI E M F+ F+Q+ N Y GG+ + A+HSQ L F SIPG++ V S PY+AKGL+ AAI +PV FE YN+K +P++ Y L +A++ R G VT+ + ++AA L +G+ +L Sbjct: 9 DAINEAMKLAMRKDENVLLIGEDVAGGAAVDHLQDDEAWGGVLGVTKGLVQEFGRTRVLDTPISEAGYMGAAMAAASTGLRPIAELMFNDFIGTCFDQVINQGAKFRYMFGGKAQVPITVRTTYGAGFRAAAQHSQSLYGLFTSIPGLKTVVPSNPYDAKGLLLAAIEDNDPVFFFEDKTSYNMKGEVPEDYYTIPLGKADIKREGNDVTLFAVGKQVNTALEAAAQLSERGIEAEVL 246
BLAST of FC920703 vs. ExPASy Swiss-Prot
Match: ODBB_DICDI (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Dictyostelium discoideum GN=bkdB PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.083e-33 Identity = 84/222 (37.84%), Postives = 117/222 (52.70%), Query Frame = 2 Query: 20 FEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAE-HSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY-NLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNK 679 F+A+ G++ M +D V GEDVG +GG ++ T GL DKYG RV +TP+ E G IG A G PI E ++ AF+QI N Y SGGQF G HSQ ESYF PG+++V STP AKGL+ A+IR ++PVI FE L+Y + E +P +Y L +A +V+ G+ +TI+ + ++QA K Sbjct: 52 FQAINNGMDIAMQKDSKAVVFGEDVG-FGGVFRCTVGLRDKYGASRVFNTPLCEQGIAGFAIGLAAQGATPIAEIQFADYIFPAFDQIVNEAAKYRYRSGGQFDCGSLTIRSPYGAVGHGGHYHSQSPESYFGHTPGLKVVIPSTPIEAKGLLLASIREKDPVIFFEPKLMYRSAVEEVPIGDYEIPLGKARIVKEGKDITIIGWGAQMRVLLQAVNMAEEK 272
BLAST of FC920703 vs. ExPASy Swiss-Prot
Match: ODPB_MYCGE (Pyruvate dehydrogenase E1 component subunit beta OS=Mycoplasma genitalium GN=pdhB PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.721e-33 Identity = 83/226 (36.73%), Postives = 122/226 (53.98%), Query Frame = 2 Query: 23 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYN-LKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKT--LVNKGMIL 691 EAL ++ ++RD +V + G+D G GG ++ TKGL KYG RV D PIAENS G+G+GAA+ GL+PIVE GF A QI + + S G +T + HS+ LE+ + I G++ V S PY+ KGL AAI S +PVI FE LY ++ IP + Y + EA ++ G +TI++Y + ++ + L +KG+ L Sbjct: 10 EALNNAMDLALERDQNVVLYGQDAGFEGGVFRATKGLQQKYGSERVWDCPIAENSMAGIGVGAAIGGLKPIVEIQFSGFSFPAMFQIFVHAARIRNRSRGVYTAPLVVRMPMGGGIKALEHHSETLEAIYAQIAGLKTVMPSNPYDTKGLFLAAIESPDPVIFFEPKKLYRAFRQEIPSDYYTVPIGEANLISEGSELTIVSYGPTMFDLINLVYSGELKDKGIEL 235
BLAST of FC920703 vs. ExPASy Swiss-Prot
Match: ODBB_PSEAE (2-oxoisovalerate dehydrogenase subunit beta OS=Pseudomonas aeruginosa GN=bkdA2 PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.034e-32 Identity = 83/230 (36.09%), Postives = 119/230 (51.74%), Query Frame = 2 Query: 23 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYN-----------------LKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAA 661 +ALR ++ ++RD V V G+DVG++GG ++ T+GL KYG RV D PI+E+ G +G GLRP+VE ++ A +Q+ + L Y S G F G HSQ E+ F + G++ V S PY+AKGL+ A I +++PVI E LYN ++PD Y L++A +VRPG +T+LTY M Y V QAA Sbjct: 21 QALRSAMDIMLERDDDVVVFGQDVGYFGGVFRCTEGLQKKYGTSRVFDAPISESGIIGAAVGMGAYGLRPVVEIQFADYVYPASDQLISEAARLRYRSAGDFIVPMTVRMPCGGGIYGGQTHSQSPEAMFTQVCGLRTVMPSNPYDAKGLLIACIENDDPVIFLEPKRLYNGPFDGHHDRPVTPWSKHPASQVPDGYYKVPLDKAAIVRPGAALTVLTYGTMVY-VAQAA 249 The following BLAST results are available for this feature:
BLAST of FC920703 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920703 ID=FC920703; Name=FC920703; organism=Citrus clementina; type=EST; length=703bpback to top |