FC920709

Overview
NameFC920709
Unique NameFC920709
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length643
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14180 contig Ccv1_Contig14180:1..643. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920709 vs. ExPASy Swiss-Prot
Match: PIMT_HYPBU (Protein-L-isoaspartate O-methyltransferase OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=pcm PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.721e-16
Identity = 54/149 (36.24%), Postives = 78/149 (52.35%), Query Frame = 2
Query:  224 KAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTP--PYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQ-------GRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGRKSW 643
            + +VE L   G I S+ V   M  + R  FVPD      Y D+P+ IG+  TISAPHM A   +  +  LKPGM  L++G+G+GY  A  A +V P        G    +E IPEL   + +N+E++  A       ++V VGDG + +
Sbjct:   16 RRLVERLVREGYIRSEHVKRAMLRVPRELFVPDELRHLAYEDTPLPIGHGQTISAPHMVAMMTEYAD--LKPGMKVLEVGAGSGYHAAVMAEVVAPSDEPREHWGHVYTIERIPELAEFARRNLERAGYA-----DRVTVIVGDGSRGY 157          
BLAST of FC920709 vs. ExPASy Swiss-Prot
Match: PIMT_IGNH4 (Protein-L-isoaspartate O-methyltransferase OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=pcm PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.270e-15
Identity = 51/144 (35.42%), Postives = 79/144 (54.86%), Query Frame = 2
Query:  218 KNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTP--PYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGRKSW 643
            K + ++ +L   G I  K+V+E M  + R  FVP+      Y D+P+ IG   TISAPHM A  ++  E  L+ G   L++G+G+GY  A  A +VGP+G    +E IPEL   + + ++       L   +++V VGDG K +
Sbjct:    4 KKRELIRNLIAEGYIKRKEVAEAMMKVPRELFVPEELRHMAYEDTPLPIGAGQTISAPHMVAYMVEAAE--LRRGDKVLEVGTGSGYHAAVMAELVGPEGHVYTIERIPELAERARERLK------ALGYNNVTVLVGDGSKGY 139          
BLAST of FC920709 vs. ExPASy Swiss-Prot
Match: PIMT2_ARCFU (Protein-L-isoaspartate O-methyltransferase 2 OS=Archaeoglobus fulgidus GN=pcm2 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.270e-15
Identity = 50/128 (39.06%), Postives = 71/128 (55.47%), Query Frame = 2
Query:  266 SKKVSEVMETIDRACFVPDG--TPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGRKSW 643
            S+KV E +  + R  FVP+      YVD+P+ IGY  TISAPHM A   +LL+  L+ G   L++G+G GY  A  A +VG  G+ + +E+IPEL   +       A    L   ++ V VGDG K +
Sbjct:   21 SRKVYEAIRKVPRHLFVPESYKNEAYVDTPLPIGYGQTISAPHMVAIMCELLD--LREGDKVLEVGTGCGYHAAVTAEIVGKSGKVISIEYIPELAERA------RAILKALGYDNVEVIVGDGSKGY 140          
BLAST of FC920709 vs. ExPASy Swiss-Prot
Match: PIMT1_ARCFU (Protein-L-isoaspartate O-methyltransferase 1 OS=Archaeoglobus fulgidus GN=pcm1 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 8.230e-15
Identity = 52/124 (41.94%), Postives = 71/124 (57.26%), Query Frame = 2
Query:  266 SKKVSEVMETIDRACFVPDG--TPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDG 631
            S+KV   ++ + R  FVP+   T  YVD+P+ IGY  TISAPHM A   +LL+  L+ G   L+IG+G GY  A  A +VG +G  V VE IPEL   + +N+        L   ++ V VGDG
Sbjct:   21 SEKVYNAIKKVPRHLFVPERYRTMAYVDTPLPIGYGQTISAPHMVAIMCELLD--LREGERVLEIGTGCGYHAAVTAEIVGKRGLVVSVERIPELAEIAKRNLS------ALGYENVVVIVGDG 136          
BLAST of FC920709 vs. ExPASy Swiss-Prot
Match: PIMT_PYRHO (Protein-L-isoaspartate O-methyltransferase OS=Pyrococcus horikoshii GN=pcm PE=3 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.075e-14
Identity = 57/146 (39.04%), Postives = 80/146 (54.79%), Query Frame = 2
Query:  218 KNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPY--VDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHV--GDGRKSW 643
            K K  VE L+  G+I S+KV        R  FV D    Y  VD P+ I    TISAPHM A  L++ +  LKPGM+ L++G+G+G+  A  A +V  +G    +E IPELV  + +N+E++        G  +VHV  GDG K +
Sbjct:   10 KWKRTVEMLKAEGIIKSEKVERAFLKCPRYLFVEDRYKKYAHVDEPLPIPAGQTISAPHMVAIMLEIAD--LKPGMNVLEVGTGSGWNAALIAEIV--KGDVYSIERIPELVEFAKRNLERA--------GVKNVHVILGDGSKGF 143          
BLAST of FC920709 vs. ExPASy Swiss-Prot
Match: PIMT_METTH (Protein-L-isoaspartate O-methyltransferase OS=Methanobacterium thermoautotrophicum GN=pcm PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.404e-14
Identity = 45/110 (40.91%), Postives = 64/110 (58.18%), Query Frame = 2
Query:  212 VNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTP--PYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHI 535
            +++ + MV+ L   G I S+ V   ME + R  FVP+      Y+D P+ IG   TISAPHM A   ++L+  L+PGM  L+IG+G GY  A  A ++GP+G    VE I
Sbjct:    2 MDERRRMVQDLMERGYIKSEAVRRAMERVPREEFVPEDEMHRAYMDMPLPIGEGQTISAPHMVAMIAEILD--LEPGMKVLEIGTGCGYNAAVIAEIIGPEGHLYTVERI 109          
BLAST of FC920709 vs. ExPASy Swiss-Prot
Match: PIMT_PYRAE (Protein-L-isoaspartate O-methyltransferase OS=Pyrobaculum aerophilum GN=pcm PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.833e-14
Identity = 51/140 (36.43%), Postives = 79/140 (56.43%), Query Frame = 2
Query:  224 KAMVEHLQHYGVITSKKVSEVMETIDRACFV-PD-GTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGRK 637
            K +VE L+  G++ S++V   + T+ R  FV P+     Y D P+ +   ATISAPHM A   +L+E   +PGM  L++G+G+GY  A  A  +  +GR   +E + EL   + QN+E+     L   G + V+ GDG+K
Sbjct:    3 KRLVEELERDGIVKSERVKRALLTVPREEFVLPEYRMMAYEDRPLPLFAGATISAPHMVAMMCELIEP--RPGMKILEVGTGSGYHAAVCAEAIEKKGRIYTIEIVKELAVFAAQNLER-----LGYWGVVEVYHGDGKK 135          
BLAST of FC920709 vs. ExPASy Swiss-Prot
Match: PIMT_METBU (Protein-L-isoaspartate O-methyltransferase OS=Methanococcoides burtonii (strain DSM 6242) GN=pcm PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.127e-14
Identity = 44/107 (41.12%), Postives = 63/107 (58.88%), Query Frame = 2
Query:  263 TSKKVSEVMETIDRACFVPDGTPP--YVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKS 577
            T ++V   M+ + R  F+P+      Y D+P+ IGY+ TISAPHM A    LL+  +  GM  L+IGSG+GY  A  A + G  G+   VE IPELV  +  N+E++
Sbjct:   10 TDQRVLNAMKKVPRHLFLPEDMQSFAYADTPLPIGYDQTISAPHMVAIMCDLLK--ITEGMTILEIGSGSGYNAAVMAELAGENGKVYTVERIPELVDLARNNLERA 114          
BLAST of FC920709 vs. ExPASy Swiss-Prot
Match: PIMT_PYRIL (Protein-L-isoaspartate O-methyltransferase OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=pcm PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.334e-14
Identity = 50/138 (36.23%), Postives = 80/138 (57.97%), Query Frame = 2
Query:  230 MVEHLQHYGVITSKKVSEVMETIDRACFV-PD-GTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGRK 637
            +VE L + G+I +++V + M  + R  FV P+     Y D P+ + ++ATISAPHM A   +L+E   +PGM  L++G+G+GY  A  A  +  +G+   +E + EL   + QNIE+     L   G + V+ GDG+K
Sbjct:    5 LVEELTNEGIIKTERVKKAMLAVPREEFVMPEYRMMAYEDRPLPLFFDATISAPHMVAMMCELVEP--RPGMKILEVGTGSGYQAAVCAEAIERKGKVYTIEIVKELAIYAAQNIER-----LGYWGIVEVYHGDGKK 135          
BLAST of FC920709 vs. ExPASy Swiss-Prot
Match: PIMT_THEM4 (Protein-L-isoaspartate O-methyltransferase OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=pcm PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 9.099e-14
Identity = 49/140 (35.00%), Postives = 74/140 (52.86%), Query Frame = 2
Query:  230 MVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPP--YVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGRKSW 643
            M EHL+ YGV  SK + E M  IDR  FVP+      Y D P+ IG+  TISAPHM    +   E +LK     L+IG+G+GY  A  +L+VG  G    +E I +L   + +  ++          +++  +GDG++ +
Sbjct:    1 MYEHLKRYGV--SKNIIEAMNKIDRKYFVPENVKDLAYDDIPLPIGFGQTISAPHMVG--IMCKELDLKEKDKVLEIGTGSGYNAAVMSLLVGKSGHIYTIERIKQLYKIATKRFKQFGLT------NITCILGDGKEGF 130          
The following BLAST results are available for this feature:
BLAST of FC920709 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
PIMT_HYPBU9.721e-1636.24Protein-L-isoaspartate O-methyltransferase OS=Hype... [more]
PIMT_IGNH41.270e-1535.42Protein-L-isoaspartate O-methyltransferase OS=Igni... [more]
PIMT2_ARCFU1.270e-1539.06Protein-L-isoaspartate O-methyltransferase 2 OS=Ar... [more]
PIMT1_ARCFU8.230e-1541.94Protein-L-isoaspartate O-methyltransferase 1 OS=Ar... [more]
PIMT_PYRHO1.075e-1439.04Protein-L-isoaspartate O-methyltransferase OS=Pyro... [more]
PIMT_METTH1.404e-1440.91Protein-L-isoaspartate O-methyltransferase OS=Meth... [more]
PIMT_PYRAE1.833e-1436.43Protein-L-isoaspartate O-methyltransferase OS=Pyro... [more]
PIMT_METBU3.127e-1441.12Protein-L-isoaspartate O-methyltransferase OS=Meth... [more]
PIMT_PYRIL5.334e-1436.23Protein-L-isoaspartate O-methyltransferase OS=Pyro... [more]
PIMT_THEM49.099e-1435.00Protein-L-isoaspartate O-methyltransferase OS=Ther... [more]

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Properties
Property NameValue
Genbank descriptionC32012A10EF RVDevelop1 Citrus clementina cDNA clone C32012A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920709 ID=FC920709; Name=FC920709; organism=Citrus clementina; type=EST; length=643bp
TGGTTTAAAGCACACATTATCAACCTTCACTCTTATCCCTCACCGTCATC
GCTGTTCTTACTTACCATCACCATCACCATCACCGTCACTTGTCTCTTTG
TCTTCTTCTTTTCATCTTCCAAATCCAGATAACCTCAGTCGTTTCCTCAC
GGGTAACCTCACGGGTAACTGTCCCTTTTTCAAGATGGAGAGATACTGGA
GTGGAAGTGGTGTCAACAAGAATAAAGCGATGGTGGAGCATTTGCAGCAT
TATGGAGTGATTACATCAAAAAAGGTATCTGAAGTAATGGAAACTATTGA
TCGGGCTTGCTTTGTGCCAGATGGTACTCCACCTTATGTTGACAGCCCAA
TGGCAATAGGTTACAATGCCACTATTTCAGCACCTCATATGCATGCAACA
TGCCTTCAATTATTGGAGGAGAATCTGAAACCTGGCATGCACGCTTTGGA
TATTGGTTCTGGAACTGGATATTTGACAGCGTGCTTTGCCTTGATGGTTG
GACCACAAGGTCGTGCTGTGGGTGTCGAGCACATTCCTGAGTTGGTGGCT
TCATCAATCCAGAATATTGAAAAAAGTGCAGCGGCTCCATTGCTGAAAGA
AGGTTCTCTCTCAGTGCATGTTGGTGATGGAAGAAAAAGCTGG
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