FC920709

Overview
NameFC920709
Unique NameFC920709
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length643
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14180 contig Ccv1_Contig14180:1..643. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920709 vs. ExPASy Swiss-Prot
Match: PIMT_STAMF (Protein-L-isoaspartate O-methyltransferase OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=pcm PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.188e-13
Identity = 51/150 (34.00%), Postives = 80/150 (53.33%), Query Frame = 2
Query:  215 NKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPY--VDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQ-----GRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGRKSW 643
            N+ + ++++L+  G+I S KV   + ++ R  FVP     Y  +D P+ IG+  TISA HM A   + L+   +PG   L+IG+G+GY  A  A +V  Q     G    VE IPEL   + +N+E++          ++V VGDG K +
Sbjct:    7 NERRRVIDYLRRIGIIRSDKVYRALLSVPREEFVPPQYREYAYIDEPLPIGFGQTISAIHMVAIMTEELDP--EPGNIVLEIGTGSGYQAAVLAEIVAKQDPNRRGHVYTVERIPELAEFAKKNLERTGYIEY-----VTVIVGDGTKGY 149          
BLAST of FC920709 vs. ExPASy Swiss-Prot
Match: PIMT_THENV (Protein-L-isoaspartate O-methyltransferase OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=pcm PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.552e-13
Identity = 55/137 (40.15%), Postives = 75/137 (54.74%), Query Frame = 2
Query:  230 MVEHLQHYGVITSKKVSEVMETIDRACFV-PD-GTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGR 634
            +VE L   GVI S+ V   M  + R  FV P+     Y D P+ +  +ATISAPHM A   +L+E   KPGM  L++G+G+GY  A  A  +  +GR   VE + EL   + QNIE+     L   G + V+ GDGR
Sbjct:    5 LVEELVREGVIKSESVRRAMLAVPREEFVMPEYRMMAYEDRPLPLFADATISAPHMVAMMCELVEP--KPGMKILEVGAGSGYQAAVCAEAMERRGRVYTVEIVKELAIYAAQNIER-----LGYWGVVEVYHGDGR 134          
BLAST of FC920709 vs. ExPASy Swiss-Prot
Match: PIMT_META3 (Protein-L-isoaspartate O-methyltransferase OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=pcm PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.552e-13
Identity = 46/123 (37.40%), Postives = 71/123 (57.72%), Query Frame = 2
Query:  212 VNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPY--VDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEK 574
            + K +A+V+ L + G + +K VS+ + T+ R  F+P     Y  VD+P+ IG+  TISA HM A     L+  LK G   L+IG+G+GY  A  A +VG  G+ + +E IPEL   +   ++K
Sbjct:    3 IKKMEAIVKGLINAGYLKNKMVSKALLTVPRHEFIPAELHDYAYVDTPLNIGHGQTISAIHMVAIICDALD--LKEGDKVLEIGTGSGYHAAVVAEIVGKNGQVITIERIPELAEKAESTLKK 123          
BLAST of FC920709 vs. ExPASy Swiss-Prot
Match: PIMT_PYRCJ (Protein-L-isoaspartate O-methyltransferase OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=pcm PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.898e-13
Identity = 53/141 (37.59%), Postives = 75/141 (53.19%), Query Frame = 2
Query:  230 MVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPY-----VDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGRK 637
            +V  L   GVI S++V   M  + R  FV   TP Y      D P+ +   ATISAPHM A   +L+E   +PGM  L++G+G+GY  A  A  +  QG+   VE + EL   + QN+E+     L   G + V+ GDGR+
Sbjct:    5 LVAELVKEGVIKSERVKNAMLKVPREEFV---TPEYRMMAYEDRPLPLFAGATISAPHMVAMMCELIEP--RPGMKILEVGTGSGYHAAVCAEAIERQGKVYTVEIVRELAIFAAQNLER-----LGYLGVVEVYRGDGRR 135          
BLAST of FC920709 vs. ExPASy Swiss-Prot
Match: PIMT_THEON (Protein-L-isoaspartate O-methyltransferase OS=Thermococcus onnurineus (strain NA1) GN=pcm PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 7.703e-13
Identity = 55/139 (39.57%), Postives = 78/139 (56.12%), Query Frame = 2
Query:  233 VEHLQHYGVITSKKVSEVMETIDRACFV-PDGTP-PYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGRKSW 643
            VE L+  G+I S+KV +    + R  FV P+     +VD P+ I    TISAPHM A  L+L E  L+ GM+ LDIG+G+G+  A  A +V  +     VE IPELV  + +N+EK+  A       + V +GDG K +
Sbjct:   14 VEKLKREGIIRSEKVRQAFLKVPRYLFVLPEHKKWAHVDEPLPIPGGQTISAPHMVAIMLELAE--LEEGMNVLDIGTGSGWNAALAAELV--KTDVYTVERIPELVEFARKNLEKAGYA-----DRVHVIIGDGTKGF 143          
BLAST of FC920709 vs. ExPASy Swiss-Prot
Match: PIMT_PYRFU (Protein-L-isoaspartate O-methyltransferase OS=Pyrococcus furiosus GN=pcm PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 7.703e-13
Identity = 52/141 (36.88%), Postives = 77/141 (54.61%), Query Frame = 2
Query:  233 VEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPY--VDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHV--GDGRKSW 643
            VE L+  G+I SK+V        R  FV D    Y  +D P+ I    T+SAPHM A  L++   NLKPGM+ L++G+G+G+  A  + +V  +     +E IPELV  + +N+E++        G  +VHV  GDG K +
Sbjct:   15 VEMLKAEGIIRSKEVERAFLKYPRYLFVEDKYKKYAHIDEPLPIPAGQTVSAPHMVAIMLEIA--NLKPGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERA--------GVKNVHVILGDGSKGF 143          
BLAST of FC920709 vs. ExPASy Swiss-Prot
Match: PIMT1_METAC (Protein-L-isoaspartate O-methyltransferase 1 OS=Methanosarcina acetivorans GN=pcm1 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 7.703e-13
Identity = 46/119 (38.66%), Postives = 66/119 (55.46%), Query Frame = 2
Query:  269 KKVSEVMETIDRACFVPDGTPP--YVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSA---AAPLLKEGSL 610
            +KV + M  + R  FVP+      Y+D+P+ IG+  TISAPHM A    LLE  L  G+  L+IG+G+GY  A    +VG  G    VE I  LV  + +N++K+       LL +GS+
Sbjct:   60 EKVLKAMLRVPRHLFVPEYAKKGAYIDTPLEIGFGQTISAPHMVAIMCDLLE--LSEGLKVLEIGAGSGYNAAVMGELVGKSGHVYTVERIEPLVDFARENLKKAGYENVTVLLDDGSM 176          
BLAST of FC920709 vs. ExPASy Swiss-Prot
Match: PIMT_PYRAB (Protein-L-isoaspartate O-methyltransferase OS=Pyrococcus abyssi GN=pcm PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.241e-12
Identity = 51/144 (35.42%), Postives = 77/144 (53.47%), Query Frame = 2
Query:  224 KAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPY--VDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHV--GDGRKSW 643
            K  VE L+  G+I S +V E      R  FV D    Y  +D P+ I    T+SAPHM A  L++ +  LK GM+ L++G+G+G+  A  + +V  +     +E IPELV  + +N+E++        G  +VHV  GDG K +
Sbjct:   11 KRTVEMLEREGIIRSLEVKEAFLKYPRYMFVEDRYKSYAHIDEPLPIPAGQTVSAPHMVAIMLEIAK--LKEGMNVLEVGTGSGWNAALISYIV--KTDVYSIERIPELVEFAKRNLERA--------GVKNVHVILGDGSKGF 142          
BLAST of FC920709 vs. ExPASy Swiss-Prot
Match: PIMT_METMP (Protein-L-isoaspartate O-methyltransferase OS=Methanococcus maripaludis GN=pcm PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.823e-12
Identity = 46/146 (31.51%), Postives = 77/146 (52.74%), Query Frame = 2
Query:  212 VNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPY--VDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGRKSW 643
            +N+   ++E+L   G I  + V + + ++ R  F+      Y  VDSP+ IGY  TISA HM     + L+  L  G + L++G+G+GY  A  + +VG  G+   +E IPEL  +S + + +      L   ++ V +GDG K +
Sbjct:    3 LNEIIPVIENLISRGYIKKQSVIDAILSVPRHKFISKSMESYAYVDSPLEIGYGQTISAIHMVGIMCEELD--LDEGQNVLEVGTGSGYHAAVVSKIVGESGKVTTIERIPELFENSKKTLSE------LGYNNVEVVLGDGTKGY 140          
BLAST of FC920709 vs. ExPASy Swiss-Prot
Match: PIMT_METMA (Protein-L-isoaspartate O-methyltransferase OS=Methanosarcina mazei GN=pcm PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.823e-12
Identity = 48/134 (35.82%), Postives = 73/134 (54.48%), Query Frame = 2
Query:  224 KAMVEHLQHYGVITSKKVSEVMETIDRACFVPD--GTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSA---AAPLLKEGSL 610
            K +VE L+  G +  +KV + M  + R  FVP+      YVD P+ IG+  TISAPHM A   ++LE  L  G   L+IG+G+GY  A  + +VG  G    VE +  L   + +N++++       LL+ GS+
Sbjct:   36 KLLVEGLE--GFVIDEKVLQAMLRVPRHRFVPEYEQRAAYVDMPLEIGHGQTISAPHMVAMMCEILE--LAEGHKVLEIGAGSGYNAAVMSELVGKTGHIYTVERVEPLANFAKKNLKEAGYKNVTVLLENGSM 165          
The following BLAST results are available for this feature:
BLAST of FC920709 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
PIMT_STAMF1.188e-1334.00Protein-L-isoaspartate O-methyltransferase OS=Stap... [more]
PIMT_THENV1.552e-1340.15Protein-L-isoaspartate O-methyltransferase OS=Ther... [more]
PIMT_META31.552e-1337.40Protein-L-isoaspartate O-methyltransferase OS=Meth... [more]
PIMT_PYRCJ5.898e-1337.59Protein-L-isoaspartate O-methyltransferase OS=Pyro... [more]
PIMT_THEON7.703e-1339.57Protein-L-isoaspartate O-methyltransferase OS=Ther... [more]
PIMT_PYRFU7.703e-1336.88Protein-L-isoaspartate O-methyltransferase OS=Pyro... [more]
PIMT1_METAC7.703e-1338.66Protein-L-isoaspartate O-methyltransferase 1 OS=Me... [more]
PIMT_PYRAB2.241e-1235.42Protein-L-isoaspartate O-methyltransferase OS=Pyro... [more]
PIMT_METMP3.823e-1231.51Protein-L-isoaspartate O-methyltransferase OS=Meth... [more]
PIMT_METMA3.823e-1235.82Protein-L-isoaspartate O-methyltransferase OS=Meth... [more]

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Properties
Property NameValue
Genbank descriptionC32012A10EF RVDevelop1 Citrus clementina cDNA clone C32012A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920709 ID=FC920709; Name=FC920709; organism=Citrus clementina; type=EST; length=643bp
TGGTTTAAAGCACACATTATCAACCTTCACTCTTATCCCTCACCGTCATC
GCTGTTCTTACTTACCATCACCATCACCATCACCGTCACTTGTCTCTTTG
TCTTCTTCTTTTCATCTTCCAAATCCAGATAACCTCAGTCGTTTCCTCAC
GGGTAACCTCACGGGTAACTGTCCCTTTTTCAAGATGGAGAGATACTGGA
GTGGAAGTGGTGTCAACAAGAATAAAGCGATGGTGGAGCATTTGCAGCAT
TATGGAGTGATTACATCAAAAAAGGTATCTGAAGTAATGGAAACTATTGA
TCGGGCTTGCTTTGTGCCAGATGGTACTCCACCTTATGTTGACAGCCCAA
TGGCAATAGGTTACAATGCCACTATTTCAGCACCTCATATGCATGCAACA
TGCCTTCAATTATTGGAGGAGAATCTGAAACCTGGCATGCACGCTTTGGA
TATTGGTTCTGGAACTGGATATTTGACAGCGTGCTTTGCCTTGATGGTTG
GACCACAAGGTCGTGCTGTGGGTGTCGAGCACATTCCTGAGTTGGTGGCT
TCATCAATCCAGAATATTGAAAAAAGTGCAGCGGCTCCATTGCTGAAAGA
AGGTTCTCTCTCAGTGCATGTTGGTGATGGAAGAAAAAGCTGG
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