FC920710
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920710 vs. ExPASy Swiss-Prot
Match: S12A2_HUMAN (Solute carrier family 12 member 2 OS=Homo sapiens GN=SLC12A2 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.285e-21 Identity = 50/134 (37.31%), Postives = 78/134 (58.21%), Query Frame = 3 Query: 225 FPAVIHIGIILSTLGAALQSLTGAPRLLAAIANDDILPVLNYFKVAEGR--EPHIATFFTAFICIGCVIIGNLDLITPTITMFFLLCYSGVNLSCFLLDLLDAPSWRPRWKFHHWSLSLLGSVFCIVIMFLISW 620 F +I GI +TL +AL SL AP++ A+ D+I P F G+ EP T I +G ++I L++I P I+ FFL Y+ +N S F L +P WRP +K+++ +SLLG++ C ++MF+I+W Sbjct: 599 FTPLISAGIFSATLSSALASLVSAPKIFQALCKDNIYPAFQMFAKGYGKNNEPLRGYILTFLIALGFILIAELNVIAPIISNFFLASYALINFSVFHASLAKSPGWRPAFKYYNMWISLLGAILCCIVMFVINW 732
BLAST of FC920710 vs. ExPASy Swiss-Prot
Match: YNSG_SCHPO (Uncharacterized transporter C18H10.16 OS=Schizosaccharomyces pombe GN=SPBC18H10.16 PE=1 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 1.678e-21 Identity = 62/220 (28.18%), Postives = 112/220 (50.91%), Query Frame = 3 Query: 12 GLFFPAVTGIMAGSNRSASLKDTQRSIPIGXXXXXXXXXXXYVISVLLFGAAXXXXXXXXXXXXXXXIAWPFPAVIHIGIILSTLGAALQSLTGAPRLLAAIANDDILPVLNYFKVAEGRE--PHIATFFTAFICIGCVIIGNLDLITPTITMFFLLCYSGVNLSCFLLDLLDAPSWRPRWKFHHWSLSLLGSVFCIVIMFLISWSFTVVSLALAASYII 665 G+FFPA G++AG++ S LK RSIP G Y++ +L GA+ I+ P I GI+ S ++ + GA +LL AIA DD++P + +F + P++A T ++ + ++++++ ITM FLL + +NLSCFLL + P++RP +++ + +L+G++ +MF + +S +A ++ Sbjct: 297 GVFFPATAGLLAGASMSGDLKAPSRSIPKGTISSQATTFLLYLLVILCVGASVTRTGLLLDMDVMEHISL-HPLFIISGILSSGAFSSFMGIFGAAKLLQAIARDDLIPGMFFFAKGSSYDDIPYVAIGVT-YLITQISLFWDINMLSSMITMTFLLTFGFINLSCFLLRISSTPNFRPTFRYFNRRTTLVGTILSFGVMFYVDRLNAFISFLIAGILVV 514
BLAST of FC920710 vs. ExPASy Swiss-Prot
Match: S12A3_PSEAM (Solute carrier family 12 member 3 OS=Pseudopleuronectes americanus GN=slc12a3 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.678e-21 Identity = 52/143 (36.36%), Postives = 83/143 (58.04%), Query Frame = 3 Query: 225 FPAVIHIGIILSTLGAALQSLTGAPRLLAAIANDDILPVLNYFKVAEGR--EPHIATFFTAFICIGCVIIGNLDLITPTITMFFLLCYSGVNLSCFLLDLLDAPSWRPRWKFHHWSLSLLGSVFCIVIMFLISWSFTVVSLAL 647 F +I GI +TL +AL L AP++ + D + P++ +F G+ EP A T I + V+I L+ I P I+ FFL Y+ +N SCF + ++P WRP ++F+ LSLLG+V C+VIMFL++W +++ + Sbjct: 452 FAPLISAGIFGATLSSALACLVSAPKVFQCLCKDQLYPLIGFFGKGYGKNAEPLRAYLLTYVIAVCFVLIAELNTIAPIISNFFLCSYALINFSCFHASVTNSPGWRPSFRFYSKWLSLLGAVCCVVIMFLLTWWAALIAFGV 594
BLAST of FC920710 vs. ExPASy Swiss-Prot
Match: S12A2_MOUSE (Solute carrier family 12 member 2 OS=Mus musculus GN=Slc12a2 PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.192e-21 Identity = 49/134 (36.57%), Postives = 78/134 (58.21%), Query Frame = 3 Query: 225 FPAVIHIGIILSTLGAALQSLTGAPRLLAAIANDDILPVLNYFKVAEGR--EPHIATFFTAFICIGCVIIGNLDLITPTITMFFLLCYSGVNLSCFLLDLLDAPSWRPRWKFHHWSLSLLGSVFCIVIMFLISW 620 F +I GI +TL +AL SL AP++ A+ D+I P F G+ EP T I +G ++I L++I P I+ FFL Y+ +N S F L +P WRP +K+++ +SL+G++ C ++MF+I+W Sbjct: 592 FAPLISAGIFSATLSSALASLVSAPKIFQALCKDNIYPAFQMFAKGYGKNNEPLRGYILTFLIALGFILIAELNVIAPIISNFFLASYALINFSVFHASLAKSPGWRPAFKYYNMWISLIGAILCCIVMFVINW 725
BLAST of FC920710 vs. ExPASy Swiss-Prot
Match: NKCL_MANSE (Bumetanide-sensitive sodium-(potassium)-chloride cotransporter OS=Manduca sexta PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.421e-20 Identity = 72/251 (28.69%), Postives = 109/251 (43.43%), Query Frame = 3 Query: 3 ALVGLFFPAVTGIMAGSNRSASLKDTQRSIPIGXXXXXXXXXXXYVISVLLFGAAXXXXXXXXXXXXXXX---------------------------------IAW-PFPAVIHIGIILSTLGAALQSLTGAPRLLAAIANDDILPVLNYFKVAEGR--EPHIATFFTAFICIGCVIIGNLDLITPTITMFFLLCYSGVNLSCFLLDLLDAPSWRPRWKFHHWSLSLLGSVFCIVIMFLISWSFTVVSLAL 647 ++ +FFP+VTGI AG+N S LKD +IP G Y + VL G AW PF I+ G +TL AL +L PRL+ A+ D I P L +F GR EP+ T F+ + ++I +L+ I P I+ F+L Y+ +N F L+ WRP +++++ LSL G + C+ IM L+ W ++V+ A+ Sbjct: 334 SVFAIFFPSVTGIQAGANISGDLKDPASAIPKGTLLALLISMVSYTLMVLFAGGGALRDASGNITDLLIVNGTVTDYSSVSLCALNNTCEYGLHNSYSVMQLMSAWGPF---IYGGCWAATLSTALTNLLSVPRLIQALGVDRIYPGLIFFSKPYGRHGEPYRGYVLTFFVSLLFLLIADLNTIAPLISNFYLASYALINFCTFHRALVRPLGWRPTFRYYNMWLSLAGFLMCVAIMLLVHWVMSLVTFAI 581
BLAST of FC920710 vs. ExPASy Swiss-Prot
Match: S12A1_RAT (Solute carrier family 12 member 1 OS=Rattus norvegicus GN=Slc12a1 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.050e-20 Identity = 49/143 (34.27%), Postives = 79/143 (55.24%), Query Frame = 3 Query: 225 FPAVIHIGIILSTLGAALQSLTGAPRLLAAIANDDILPVLNYFKVAEGR--EPHIATFFTAFICIGCVIIGNLDLITPTITMFFLLCYSGVNLSCFLLDLLDAPSWRPRWKFHHWSLSLLGSVFCIVIMFLISWSFTVVSLAL 647 F +I GI +TL +AL SL AP++ A+ D+I L +F G+ EP F T I + ++I L++I P I+ FFL Y+ +N SCF +P WRP + ++ +SL G++ C +MF+I+W V++ + Sbjct: 488 FGPLITAGIFSATLSSALASLVSAPKVFQALCKDNIFKGLQFFAKGYGKNNEPLRGYFLTFVIAMAFILIAELNVIAPIISNFFLASYALINFSCFHASYAKSPGWRPAYGIYNMWVSLFGAILCCAVMFVINWWAAVITYVI 630
BLAST of FC920710 vs. ExPASy Swiss-Prot
Match: S12A1_MOUSE (Solute carrier family 12 member 1 OS=Mus musculus GN=Slc12a1 PE=2 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 7.050e-20 Identity = 49/143 (34.27%), Postives = 79/143 (55.24%), Query Frame = 3 Query: 225 FPAVIHIGIILSTLGAALQSLTGAPRLLAAIANDDILPVLNYFKVAEGR--EPHIATFFTAFICIGCVIIGNLDLITPTITMFFLLCYSGVNLSCFLLDLLDAPSWRPRWKFHHWSLSLLGSVFCIVIMFLISWSFTVVSLAL 647 F +I GI +TL +AL SL AP++ A+ D+I L +F G+ EP F T I + ++I L++I P I+ FFL Y+ +N SCF +P WRP + ++ +SL G++ C +MF+I+W V++ + Sbjct: 488 FGPLITAGIFSATLSSALASLVSAPKVFQALCKDNIFKGLQFFAKGYGKNNEPLRGYFLTFVIAMAFILIAELNVIAPIISNFFLASYALINFSCFHASYAKSPGWRPAYGIYNMWVSLFGAILCCAVMFVINWWAAVITYVI 630
BLAST of FC920710 vs. ExPASy Swiss-Prot
Match: S12A1_HUMAN (Solute carrier family 12 member 1 OS=Homo sapiens GN=SLC12A1 PE=1 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 2.051e-19 Identity = 49/143 (34.27%), Postives = 77/143 (53.85%), Query Frame = 3 Query: 225 FPAVIHIGIILSTLGAALQSLTGAPRLLAAIANDDILPVLNYFKVAEGR--EPHIATFFTAFICIGCVIIGNLDLITPTITMFFLLCYSGVNLSCFLLDLLDAPSWRPRWKFHHWSLSLLGSVFCIVIMFLISWSFTVVSLAL 647 F +I GI +TL +AL SL AP++ A+ D+I L +F G+ EP T I + ++I L+ I P I+ FFL Y+ +N SCF +P WRP + ++ +SL G+V C +MF+I+W V++ + Sbjct: 492 FGPLITAGIFSATLSSALASLVSAPKVFQALCKDNIYKALQFFAKGYGKNNEPLRGYILTFLIAMAFILIAELNTIAPIISNFFLASYALINFSCFHASYAKSPGWRPAYGIYNMWVSLFGAVLCCAVMFVINWWAAVITYVI 634
BLAST of FC920710 vs. ExPASy Swiss-Prot
Match: S12A1_RABIT (Solute carrier family 12 member 1 OS=Oryctolagus cuniculus GN=SLC12A1 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.268e-18 Identity = 48/143 (33.57%), Postives = 76/143 (53.15%), Query Frame = 3 Query: 225 FPAVIHIGIILSTLGAALQSLTGAPRLLAAIANDDILPVLNYFKVAEGR--EPHIATFFTAFICIGCVIIGNLDLITPTITMFFLLCYSGVNLSCFLLDLLDAPSWRPRWKFHHWSLSLLGSVFCIVIMFLISWSFTVVSLAL 647 F +I GI +TL +AL SL A ++ A+ D+I L +F G+ EP T I + ++I L+ I P I+ FFL Y+ +N SCF +P WRP + ++ +SL G+V C +MF+I+W V++ + Sbjct: 492 FGPLITAGIFSATLSSALASLVSAAKVFQALCKDNIYKALQFFAKGYGKNNEPLRGYILTFVIAMAFILIAELNTIAPIISNFFLASYALINFSCFHASYAKSPGWRPAYGIYNMWVSLFGAVLCCAVMFVINWWAAVITYVI 634
BLAST of FC920710 vs. ExPASy Swiss-Prot
Match: YB85_YEAST (Uncharacterized membrane protein YBR235W OS=Saccharomyces cerevisiae GN=YBR235W PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.052e-18 Identity = 63/220 (28.64%), Postives = 109/220 (49.55%), Query Frame = 3 Query: 6 LVGLFFPAVTGIMAGSNRSASLKDTQRSIPIGXXXXXXXXXXXYVISVLLFGAAXXXXXXXXXXXXXXXIAWPFPAVIHIGIILSTLGAALQSLTGAPRLLAAIANDDILPVLNYFKVAEGREPHIATFFTAFICIGCVIIGNLDLITPTITMFFLLCYSGVNLSCFLLDLLDAPSWRPRWKFHHWSLSLLGSVFCIVIMFLISW-SFTVVSLALAASYI 662 L G+FFPA GI AG+ S+ L+ +SIP G Y + V G + I+ VI +G + ++L + + + GA +L AIA D+I+P L F P + FT + C + +++ I ITM FL+ + +NL+CFLL + AP++RP +K+ + + +G++ +V M ++ S +V+ LA+ ++ Sbjct: 287 LFGVFFPATAGIFAGAGMSSELRKPSKSIPKGTLWGLLFTFICYAVVVFSMGCSIPRRSLYDEVQIIQTIS-SVQWVIFMGEMATSLFSIIVGMLGAAYVLEAIAKDNIIPGLEIF----AHSPLYSLIFTWILTQLC-LFSDVNKIATFITMTFLMTFVVMNLACFLLGISSAPNFRPSFKYFNRYTTAIGALLSVVAMLIVDGISASVLFLAMILLFL 500 The following BLAST results are available for this feature:
BLAST of FC920710 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920710 ID=FC920710; Name=FC920710; organism=Citrus clementina; type=EST; length=674bpback to top |