FC920710
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920710 vs. ExPASy Swiss-Prot
Match: S12A3_MOUSE (Solute carrier family 12 member 3 OS=Mus musculus GN=Slc12a3 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 8.618e-18 Identity = 45/143 (31.47%), Postives = 78/143 (54.55%), Query Frame = 3 Query: 225 FPAVIHIGIILSTLGAALQSLTGAPRLLAAIANDDILPVLNYFKVAEG--REPHIATFFTAFICIGCVIIGNLDLITPTITMFFLLCYSGVNLSCFLLDLLDAPSWRPRWKFHHWSLSLLGSVFCIVIMFLISWSFTVVSLAL 647 F +I GI +TL +AL L A ++ + D + P++ +F G REP I + +II L+ I P I+ FFL Y+ +N SCF + ++P WRP ++++ +L G+V +VIMFL++W ++++ + Sbjct: 451 FAPLITAGIFGATLSSALACLVSAAKVFQCLCEDQLYPLIGFFGKGYGKNREPVRGYLLAYAIAVAFIIIAELNTIAPIISNFFLCSYALINFSCFHASITNSPGWRPSFRYYSKWAALFGAVISVVIMFLLTWWAALIAIGV 593
BLAST of FC920710 vs. ExPASy Swiss-Prot
Match: S12A8_MOUSE (Solute carrier family 12 member 8 OS=Mus musculus GN=Slc12a8 PE=2 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 1.126e-17 Identity = 54/182 (29.67%), Postives = 89/182 (48.90%), Query Frame = 3 Query: 12 GLFFPAVTGIMAGSNRSASLKDTQRSIPIGXXXXXXXXXXXYVISVLLFGAAXXXXXXXXXXXXXXXIAWPFPAVIHIGIILSTLGAALQSLTGAPRLLAAIANDDILPVLNYFKVAEG--REPHIATFFTAFICIGCVIIGNLDLITPTITMFFLLCYSGVNLSCFLLDLLD---APSWRP 542 G+FFPA TG+MAG N L+D S+P+G Y+I L GA ++ + +G+ +S+L + + L GAPR+L IA D ++P L + +G + P A T+ + + V++G ++++ P +T+ F+L Y V+ S F L + APS P Sbjct: 237 GVFFPAATGVMAGFNMGGDLRDPADSVPLGSLAAVGVSWFLYIIFAFLLGAVCTREALRSDFLIAEKVSL-VGFLFLLGLYISSLASCMGGLYGAPRILQCIAQDKVIPALAFLANGKGPNKTPVAAICLTSLVTMAFVLVGQVNVLAPVVTINFMLTYIMVDYSYFALSMAHCGLAPSPEP 417
BLAST of FC920710 vs. ExPASy Swiss-Prot
Match: S12A8_XENLA (Solute carrier family 12 member 8 OS=Xenopus laevis GN=slc12a8 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.920e-17 Identity = 51/167 (30.54%), Postives = 84/167 (50.30%), Query Frame = 3 Query: 12 GLFFPAVTGIMAGSNRSASLKDTQRSIPIGXXXXXXXXXXXYVISVLLFGAAXXXXXXXXXXXXXXXIAWPFPAVIHIGIILSTLGAALQSLTGAPRLLAAIANDDILPVLNYFKVAEG--REPHIATFFTAFICIGCVIIGNLDLITPTITMFFLLCYSGVNLSCF 506 G+FFPA TG+M G N S L+ +IP+G YV+ V L GA ++ + +G+ +S+L + + L GAPR+L IA + ++P L++ +G + P A F T + + V IG ++++ P +T+ F+L YS V+ S F Sbjct: 252 GVFFPAATGVMVGFNMSGDLQRPSINIPLGSLAAIGTSWFLYVVFVFLLGAICTREFLRYEFMIAEKVSL-VGGLFLLGLYISSLASCMGGLYGAPRILQCIAQEKVIPALSFLGRGKGPNKTPVAAIFITGLLTMAFVFIGQVNVLAPIVTINFMLTYSAVDYSYF 417
BLAST of FC920710 vs. ExPASy Swiss-Prot
Match: S12A3_RAT (Solute carrier family 12 member 3 OS=Rattus norvegicus GN=Slc12a3 PE=2 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 1.920e-17 Identity = 44/143 (30.77%), Postives = 78/143 (54.55%), Query Frame = 3 Query: 225 FPAVIHIGIILSTLGAALQSLTGAPRLLAAIANDDILPVLNYFKVAEGR--EPHIATFFTAFICIGCVIIGNLDLITPTITMFFLLCYSGVNLSCFLLDLLDAPSWRPRWKFHHWSLSLLGSVFCIVIMFLISWSFTVVSLAL 647 F +I GI +TL +AL L A ++ + D + P++ +F G+ EP I + +II L+ I P I+ FFL Y+ +N SCF + ++P WRP ++++ +L G+V +VIMFL++W ++++ + Sbjct: 451 FAPLITAGIFGATLSSALACLVSAAKVFQCLCEDQLYPLIGFFGKGYGKNKEPVRGYLLAYAIAVAFIIIAELNTIAPIISNFFLCSYALINFSCFHASITNSPGWRPSFRYYSKWAALFGAVISVVIMFLLTWWAALIAIGV 593
BLAST of FC920710 vs. ExPASy Swiss-Prot
Match: S12A3_HUMAN (Solute carrier family 12 member 3 OS=Homo sapiens GN=SLC12A3 PE=1 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 1.920e-17 Identity = 43/143 (30.07%), Postives = 79/143 (55.24%), Query Frame = 3 Query: 225 FPAVIHIGIILSTLGAALQSLTGAPRLLAAIANDDILPVLNYFKVAEGR--EPHIATFFTAFICIGCVIIGNLDLITPTITMFFLLCYSGVNLSCFLLDLLDAPSWRPRWKFHHWSLSLLGSVFCIVIMFLISWSFTVVSLAL 647 F +I GI +TL +AL L A ++ + D + P++ +F G+ EP I + +II L+ I P I+ FFL Y+ +N SCF + ++P WRP +++++ +L G++ +VIMFL++W ++++ + Sbjct: 453 FAPLITAGIFGATLSSALACLVSAAKVFQCLCEDQLYPLIGFFGKGYGKNKEPVRGYLLAYAIAVAFIIIAELNTIAPIISNFFLCSYALINFSCFHASITNSPGWRPSFQYYNKWAALFGAIISVVIMFLLTWWAALIAIGV 595
BLAST of FC920710 vs. ExPASy Swiss-Prot
Match: S12A8_HUMAN (Solute carrier family 12 member 8 OS=Homo sapiens GN=SLC12A8 PE=2 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 8.066e-16 Identity = 49/171 (28.65%), Postives = 83/171 (48.54%), Query Frame = 3 Query: 12 GLFFPAVTGIMAGSNRSASLKDTQRSIPIGXXXXXXXXXXXYVISVLLFGAAXXXXXXXXXXXXXXXIAWPFPAVIHIGIILSTLGAALQSLTGAPRLLAAIANDDILPVLNYFKVAEG--REPHIATFFTAFICIGCVIIGNLDLITPTITMFFLLCYSGVNLSCFLLDL 518 G+FFPA TG+MAG N L++ SIP G Y++ V L GA ++ + +G+ +S+L + + L GAPR+L IA + ++P L +G + P A T+ + + V +G ++++ P +T+ F+L Y V+ S F L + Sbjct: 238 GVFFPAATGVMAGFNMGGDLREPAASIPPGSLAAVGISWFLYIVFVFLLGAICTREALRYDFLIAEKVSL-MGFLFLLGLYISSLASCMGGLYGAPRILQCIAQEKVIPALACLGQGKGPNKTPVAAICLTSLVTMAFVFVGQVNVLAPIVTINFMLTYVAVDYSYFSLSM 407
BLAST of FC920710 vs. ExPASy Swiss-Prot
Match: S12A8_RAT (Solute carrier family 12 member 8 OS=Rattus norvegicus GN=Slc12a8 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.424e-12 Identity = 46/172 (26.74%), Postives = 81/172 (47.09%), Query Frame = 3 Query: 12 GLFFPAVTGIMAGSNRSASLKD-TQRSIPIGXXXXXXXXXXXYVISVLLFGAAXXXXXXXXXXXXXXXIAWPFPAVIHIGIILSTLGAALQSLTGAPRLLAAIANDDILPVLNYFKVAEG--REPHIATFFTAFICIGCVIIGNLDLITPTITMFFLLCYSGVNLSCFLLDL 518 G+FFPA TG+MAG N L++ + P +I L GA ++ + +G+ +S+L + + L GAPR+L IA D ++P L + +G + P A T+ + + V++G ++++ P +T+ F+L Y V+ S F L + Sbjct: 237 GVFFPAATGVMAGFNMGGDLREPADQHTPRLPSSCWVSRGFSNIIFAFLLGAVCTREALRSDFLIAEKVSL-VGFLFLLGLYISSLASCMGGLYGAPRILQCIAQDKVIPALAFLGNGKGPNKTPVAAICLTSLVTMAFVLVGQVNVLAPVVTINFMLTYIAVDYSYFALSM 407 The following BLAST results are available for this feature:
BLAST of FC920710 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920710 ID=FC920710; Name=FC920710; organism=Citrus clementina; type=EST; length=674bpback to top |