FC920713
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920713 vs. ExPASy Swiss-Prot
Match: ODPB_CHLAT (Pyruvate dehydrogenase E1 component subunit beta OS=Chlorokybus atmophyticus GN=pdhB PE=3 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 5.336e-60 Identity = 111/173 (64.16%), Postives = 133/173 (76.88%), Query Frame = 3 Query: 3 EEEMDRDPHVFPMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNL*ERIPDEE 521 +EEM+R+ V +GED+GHYGGSYKVT+GL KYG RV+DTPIAE SF G +GAA TGL P+VEGMNM F+LLA++QISNN GML TSGG F QLGAEHSQRLESYFQS+PG+Q+V CSTPYNAKGL+K+AIRS+NP++ EHVLLYNL +PD + Sbjct: 15 DEEMEREKRVVLIGEDIGHYGGSYKVTQGLYGKYGKHRVIDTPIAEYSFVGAAVGAAATGLIPVVEGMNMAFILLAYSQISNNMGMLCATSGGHFQVPMVLRGPGGIGKQLGAEHSQRLESYFQSVPGLQIVTCSTPYNAKGLLKSAIRSKNPILFIEHVLLYNLKGEVPDND 187
BLAST of FC920713 vs. ExPASy Swiss-Prot
Match: ODPB_DICDI (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Dictyostelium discoideum GN=pdhB PE=1 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 4.860e-37 Identity = 76/173 (43.93%), Postives = 108/173 (62.43%), Query Frame = 3 Query: 3 EEEMDRDPHVFPMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNL*ERIPDEE 521 +EE+ RD VF MGE+V Y G+YK+TKGL DKYG R++DTPI E F G+G+GAAM G RPI+E M F + A + I N+ HY SGG+ +GA+HSQ +++ S+PG+++VA + + +GL+K+AIR +NPV+ E LLYN + D+E Sbjct: 40 DEELARDEKVFIMGEEVAQYNGAYKITKGLFDKYGGDRIIDTPITEAGFAGIGVGAAMAGTRPIIEFMTFNFAMQAIDHIINSSAKTHYMSGGKVFNPIVWRGPNGPPTAVGAQHSQCFAAWYGSVPGLKVVAPWSAADHRGLLKSAIRDDNPVVYLESELLYNYKFDLSDQE 212
BLAST of FC920713 vs. ExPASy Swiss-Prot
Match: ODPB_ARATH (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Arabidopsis thaliana GN=PDH2 PE=1 SV=2) HSP 1 Score: 150.984 bits (380), Expect = 3.150e-36 Identity = 74/163 (45.40%), Postives = 104/163 (63.80%), Query Frame = 3 Query: 3 EEEMDRDPHVFPMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY 491 +EEM DP VF MGE+VG Y G+YK+TKGL +KYG RV DTPI E FTG+G+GAA GL+P+VE M F + A + I N+ +Y S GQ +GA+HSQ +++ S+PG++++A + +A+GL+KAAIR +PV+ E+ LLY Sbjct: 47 DEEMSADPKVFVMGEEVGQYQGAYKITKGLLEKYGPERVYDTPITEAGFTGIGVGAAYAGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSAGQINVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLAPYSAEDARGLLKAAIRDPDPVVFLENELLY 209
BLAST of FC920713 vs. ExPASy Swiss-Prot
Match: ODPB_ZYMMO (Pyruvate dehydrogenase E1 component subunit beta OS=Zymomonas mobilis GN=pdhB PE=3 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 4.114e-36 Identity = 74/162 (45.68%), Postives = 105/162 (64.81%), Query Frame = 3 Query: 6 EEMDRDPHVFPMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY 491 EEM RD VF MGE+V Y G+YKVT+GL ++G RV+DTPI+E F+G+G+GAAM GLRP++E M M F + A + I N+ HY SGGQ ++GA+H+Q ++ ++PG+ ++A +AKGL+KAAIRS++PV+ E LLY Sbjct: 151 EEMRRDDRVFVMGEEVAEYQGAYKVTQGLLQEFGARRVVDTPISEYGFSGIGVGAAMEGLRPVIEFMTMNFSMQAIDHIINSAAKTHYMSGGQVRCPIVFRGPNGAAPRVGAQHTQNFGPWYAAVPGLVVLAPYDAIDAKGLLKAAIRSDDPVVFLECELLY 312
BLAST of FC920713 vs. ExPASy Swiss-Prot
Match: ODPB_YEAST (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Saccharomyces cerevisiae GN=PDB1 PE=1 SV=2) HSP 1 Score: 148.673 bits (374), Expect = 1.563e-35 Identity = 72/162 (44.44%), Postives = 104/162 (64.20%), Query Frame = 3 Query: 6 EEMDRDPHVFPMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY 491 EE+DRD VF +GE+V Y G+YKV+KGL D++G+ RV+DTPI E FTG+ +GAA+ GL+PIVE M+ F + A + + N+ HY SGG +GA+HSQ ++ SIPG++++ + +A+GL+KAAIR NPV+ E+ LLY Sbjct: 51 EELDRDDDVFLIGEEVAQYNGAYKVSKGLLDRFGERRVVDTPITEYGFTGLAVGAALKGLKPIVEFMSFNFSMQAIDHVVNSAAKTHYMSGGTQKCQMVFRGPNGAAVGVGAQHSQDFSPWYGSIPGLKVLVPYSAEDARGLLKAAIRDPNPVVFLENELLY 212
BLAST of FC920713 vs. ExPASy Swiss-Prot
Match: ODPB_RHIME (Pyruvate dehydrogenase E1 component subunit beta OS=Rhizobium meliloti GN=pdhB PE=3 SV=2) HSP 1 Score: 147.132 bits (370), Expect = 4.548e-35 Identity = 77/169 (45.56%), Postives = 104/169 (61.54%), Query Frame = 3 Query: 6 EEMDRDPHVFPMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNL*ERIP 512 EEM + VF MGE+V Y G+YKVT+GL ++G RV+DTPI E+ F G+G+GAAMTGLRPIVE M F + A +QI N+ Y SGGQ ++ A+HSQ +++ IPG+++V T +AKGL+KAAIR NPVI E+ +LY +P Sbjct: 150 EEMRANEDVFVMGEEVAEYQGAYKVTQGLLQEFGARRVVDTPITEHGFAGVGVGAAMTGLRPIVEFMTFNFAMQAIDQIINSAAKTLYMSGGQMGAPIVFRGPSGAAARVAAQHSQCYAAWYSHIPGLKVVMPYTAADAKGLLKAAIRDPNPVIFLENEILYGQSFEVP 318
BLAST of FC920713 vs. ExPASy Swiss-Prot
Match: ODBB_BACSU (2-oxoisovalerate dehydrogenase subunit beta OS=Bacillus subtilis GN=bfmBAB PE=1 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 4.548e-35 Identity = 73/165 (44.24%), Postives = 104/165 (63.03%), Query Frame = 3 Query: 3 EEEMDRDPHVFPMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNL 497 +EEM+RD VF +GEDVG GG +K T GL +++G+ RV+DTP+AE++ G+GIGAAM G+RPI E F++ A NQI + + Y S ++ HSQ +E+ F + PG+++V STPY+AKGL+KAA+R E+PV+ FEH Y L Sbjct: 15 KEEMERDSRVFVLGEDVGRKGGVFKATAGLYEQFGEERVMDTPLAESAIAGVGIGAAMYGMRPIAEMQFADFIMPAVNQIISEAAKIRYRSNNDWSCPIVVRAPYGGGVHGALYHSQSVEAIFANQPGLKIVMPSTPYDAKGLLKAAVRDEDPVLFFEHKRAYRL 179
BLAST of FC920713 vs. ExPASy Swiss-Prot
Match: ODPB_RICTY (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia typhi GN=pdhB PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 7.758e-35 Identity = 75/171 (43.86%), Postives = 103/171 (60.23%), Query Frame = 3 Query: 3 EEEMDRDPHVFPMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNL*ERIPD 515 +EEM RD VF +GE+V Y G+YKVT+GL +++G RV+DTPI E F G+ +GAA GLRPIVE M F + AF+ I N+ HY SGGQ ++ A+HSQ + + IPG+++VA + + KGLM AIR +NPVI E+ +LY +PD Sbjct: 14 QEEMLRDDKVFVIGEEVAEYQGAYKVTQGLLEQFGSKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKCPIVFRGPNGAASRVAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVIFLENEILYGHSFDVPD 184
BLAST of FC920713 vs. ExPASy Swiss-Prot
Match: ODPB_RICPR (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia prowazekii GN=pdhB PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 7.758e-35 Identity = 75/171 (43.86%), Postives = 103/171 (60.23%), Query Frame = 3 Query: 3 EEEMDRDPHVFPMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNL*ERIPD 515 +EEM RD VF +GE+V Y G+YKVT+GL +++G RV+DTPI E F G+ +GAA GLRPIVE M F + AF+ I N+ HY SGGQ ++ A+HSQ + + IPG+++VA + + KGLM AIR +NPVI E+ +LY +PD Sbjct: 14 QEEMLRDEKVFVIGEEVAEYQGAYKVTQGLLEQFGSKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKCPIVFRGPNGAASRVAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVIFLENEILYGHSFDVPD 184
BLAST of FC920713 vs. ExPASy Swiss-Prot
Match: ODPB_RICFE (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia felis GN=pdhB PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.323e-34 Identity = 73/163 (44.79%), Postives = 100/163 (61.35%), Query Frame = 3 Query: 3 EEEMDRDPHVFPMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY 491 +EEM RD VF MGE+V Y G+YKVT+GL +++G RV+DTPI E F G+ +GAA GLRPIVE M F + AF+ I N+ HY SGGQ ++ A+HSQ + + +PG+++VA + + KGLM AIR +NPVI E+ +LY Sbjct: 14 QEEMIRDDKVFVMGEEVAEYQGAYKVTQGLLEQFGPKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQAKCPIVFRGPNGAASRVAAQHSQNYTACYSHVPGLKVVAPYSAEDHKGLMLTAIRDDNPVIFLENEILY 176 The following BLAST results are available for this feature:
BLAST of FC920713 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920713 ID=FC920713; Name=FC920713; organism=Citrus clementina; type=EST; length=522bpback to top |