FC920713
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920713 vs. ExPASy Swiss-Prot
Match: ODPB_MOUSE (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Mus musculus GN=Pdhb PE=1 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 7.262e-33 Identity = 69/172 (40.12%), Postives = 105/172 (61.05%), Query Frame = 3 Query: 3 EEEMDRDPHVFPMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNL*ERIPDE 518 +EE++RD VF +GE+V Y G+YKV++GL KYGD R++DTPI+E F G+ +GAAM GLRPI E M F + A +Q+ N+ +Y S G + A+HSQ +++ PG+++V+ +AKGL+K+AIR NPV++ E+ L+Y + +P E Sbjct: 44 DEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSAGLQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNNPVVMLENELMYGVAFELPAE 215
BLAST of FC920713 vs. ExPASy Swiss-Prot
Match: ODPB_CAEEL (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Caenorhabditis elegans GN=C04C3.3 PE=1 SV=2) HSP 1 Score: 139.813 bits (351), Expect = 7.262e-33 Identity = 71/172 (41.28%), Postives = 102/172 (59.30%), Query Frame = 3 Query: 3 EEEMDRDPHVFPMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNL*ERIPDE 518 +EE+ RD VF MGE+V Y G+YK++KGL K+GD RV+DTPI E F G+ +GAA GLRPI E M F + A +QI N+ +Y S G+ + A+HSQ +++ PG+++V + +AKGL+KAAIR +NPV+ E+ +LY + DE Sbjct: 36 DEEIKRDDRVFLMGEEVAQYDGAYKISKGLWKKHGDKRVVDTPITEMGFAGIAVGAAFAGLRPICEFMTFNFSMQAIDQIINSAAKTYYMSAGRVPVPIVFRGPNGAAAGVAAQHSQDFSAWYAHCPGLKVVCPYSAEDAKGLLKAAIRDDNPVVFLENEILYGQSFPVGDE 207
BLAST of FC920713 vs. ExPASy Swiss-Prot
Match: ODPB_ASCSU (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Ascaris suum PE=1 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 1.618e-32 Identity = 68/165 (41.21%), Postives = 99/165 (60.00%), Query Frame = 3 Query: 3 EEEMDRDPHVFPMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNL 497 +EE+ RD VF +GE+V Y G+YK++KGL KYGD R+ DTPI E + G+ +GAAM GLRPI E M+M F + + I N+ HY S G+F + +HSQ ++F PG+++V +A+GL+KAA+R +NPVI E+ +LY + Sbjct: 45 DEEIKRDDRVFLIGEEVAQYDGAYKISKGLWKKYGDGRIWDTPITEMAIAGLSVGAAMNGLRPICEFMSMNFSMQGIDHIINSAAKAHYMSAGRFHVPIVFRGANGAAVGVAQQHSQDFTAWFMHCPGVKVVVPYDCEDARGLLKAAVRDDNPVICLENEILYGM 209
BLAST of FC920713 vs. ExPASy Swiss-Prot
Match: ACOB_RALEH (Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=acoB PE=1 SV=3) HSP 1 Score: 128.642 bits (322), Expect = 1.674e-29 Identity = 73/181 (40.33%), Postives = 101/181 (55.80%), Query Frame = 3 Query: 3 EEEMDRDPHVFPMGEDV----------GHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNL*ERIPD 515 ++EM RDP V +GED+ +GG VTKGL K+GD R+LDTP++E+++ G IGAA G+RPI E M + F+ + F+QI N Y GG+ + A+HSQ L F IPG+++V STPY+ KGL+ AIR +PVI EH LY L +P+ Sbjct: 16 DQEMTRDPSVIMLGEDIVGGAGADGEKDAWGGVLGVTKGLYAKHGD-RLLDTPLSESAYVGAAIGAAACGMRPIAELMFIDFMGVCFDQIFNQAAKFRYMFGGKAETPVVIRAMVGAGFRAAAQHSQMLTPLFTHIPGLKVVCPSTPYDTKGLLIQAIRDNDPVIFCEHKNLYGLEGEVPE 195
BLAST of FC920713 vs. ExPASy Swiss-Prot
Match: ODPB_ACHLA (Pyruvate dehydrogenase E1 component subunit beta OS=Acholeplasma laidlawii GN=pdhB PE=1 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 5.385e-28 Identity = 63/163 (38.65%), Postives = 91/163 (55.83%), Query Frame = 3 Query: 3 EEEMDRDPHVFPMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY 491 ++ M++D + GED G GG ++VT GL KYG+ RV DTPIAE++ G +G A+ GL+PI E GF+ + + + + S GQFT + HS+ LE F SIPG+++V STPY+AKGL+ AAI +PV+ E +Y Sbjct: 15 DQAMEKDESIVVFGEDAGFEGGVFRVTAGLQKKYGETRVFDTPIAESAIVGSAVGMAINGLKPIAEIQFDGFIFPGYTDLVTHAARMRNRSRGQFTVPMVLRLPHGGGIRALEHHSEALEVLFGSIPGLKVVTPSTPYDAKGLLLAAINDPDPVVFLEPKRIY 177
BLAST of FC920713 vs. ExPASy Swiss-Prot
Match: ODPB_BACSU (Pyruvate dehydrogenase E1 component subunit beta OS=Bacillus subtilis GN=pdhB PE=3 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 1.200e-27 Identity = 62/172 (36.05%), Postives = 96/172 (55.81%), Query Frame = 3 Query: 9 EMDRDPHVFPMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY-NL*ERIPDEE 521 E+ D +V GEDVG GG ++ T+GL ++G+ RV DTP+AE+ G+ +G + G RP++E GF+ + +S + Y SGG++T H+ LE PGI++V STPY+AKGL+ +AIR +PV+ EH+ LY + + +P+EE Sbjct: 17 ELKNDENVLVFGEDVGVNGGVFRATEGLQKEFGEDRVFDTPLAESGIGGLALGLGLNGFRPVMEIQFFGFVYEVMDSVSGQMARMRYRSGGRWTSPVTIRSPFGGGVHTPELHADSLEGLVAQQPGIKVVIPSTPYDAKGLLISAIRDNDPVVFLEHMKLYRSFRQEVPEEE 188
BLAST of FC920713 vs. ExPASy Swiss-Prot
Match: ODPB_STAES (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus epidermidis (strain ATCC 12228) GN=pdhB PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 2.673e-27 Identity = 62/174 (35.63%), Postives = 99/174 (56.90%), Query Frame = 3 Query: 3 EEEMDRDPHVFPMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY-NL*ERIPDEE 521 + E+ RD V GEDVG GG ++VT+GL ++G+ RV DTP+AE+ G+ +G A+TG RP++E +GF+ F++++ + SGG H+ LE PG+++V S PY+AKGL+ ++I+S +PV+ EH+ LY + E +P+EE Sbjct: 15 KSELKRDEDVLVFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLALGLAVTGFRPVMEIQFLGFVYEVFDEVAGQIARTRFRSGGTKPAPVTIRTPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIQSNDPVVYLEHMKLYRSFREEVPEEE 188
BLAST of FC920713 vs. ExPASy Swiss-Prot
Match: ODPB_STAEQ (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=pdhB PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 2.673e-27 Identity = 62/174 (35.63%), Postives = 99/174 (56.90%), Query Frame = 3 Query: 3 EEEMDRDPHVFPMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY-NL*ERIPDEE 521 + E+ RD V GEDVG GG ++VT+GL ++G+ RV DTP+AE+ G+ +G A+TG RP++E +GF+ F++++ + SGG H+ LE PG+++V S PY+AKGL+ ++I+S +PV+ EH+ LY + E +P+EE Sbjct: 15 KSELKRDEDVLVFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLALGLAVTGFRPVMEIQFLGFVYEVFDEVAGQIARTRFRSGGTKPAPVTIRTPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIQSNDPVVYLEHMKLYRSFREEVPEEE 188
BLAST of FC920713 vs. ExPASy Swiss-Prot
Match: ODPB_STAAW (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain MW2) GN=pdhB PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 7.776e-27 Identity = 63/172 (36.63%), Postives = 96/172 (55.81%), Query Frame = 3 Query: 9 EMDRDPHVFPMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY-NL*ERIPDEE 521 E+ D V GEDVG GG ++VT+GL ++G+ RV DTP+AE+ G+ +G A+ G RP++E +GF+ F+ I+ + SGG T H+ LE PG+++V S PY+AKGL+ ++IRS +PV+ EH+ LY + E +P+EE Sbjct: 17 ELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGTKTAPVTIRSPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFREEVPEEE 188
BLAST of FC920713 vs. ExPASy Swiss-Prot
Match: ODPB_STAAU (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus GN=pdhB PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 7.776e-27 Identity = 63/172 (36.63%), Postives = 96/172 (55.81%), Query Frame = 3 Query: 9 EMDRDPHVFPMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY-NL*ERIPDEE 521 E+ D V GEDVG GG ++VT+GL ++G+ RV DTP+AE+ G+ +G A+ G RP++E +GF+ F+ I+ + SGG T H+ LE PG+++V S PY+AKGL+ ++IRS +PV+ EH+ LY + E +P+EE Sbjct: 17 ELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGTKTAPVTIRSPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFREEVPEEE 188 The following BLAST results are available for this feature:
BLAST of FC920713 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920713 ID=FC920713; Name=FC920713; organism=Citrus clementina; type=EST; length=522bpback to top |