FC920713
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920713 vs. ExPASy Swiss-Prot
Match: ODBB_PSEPU (2-oxoisovalerate dehydrogenase subunit beta OS=Pseudomonas putida GN=bkdA2 PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 2.502e-25 Identity = 61/161 (37.89%), Postives = 87/161 (54.04%), Query Frame = 3 Query: 12 MDRDPHVFPMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYN 494 ++RD +V G+DVG++GG ++ T+GL KYG RV D PI+E+ G +G GLRP+VE + A +QI + L Y S G+F G HSQ E+ F + G++ V S PY+AKGL+ A+I ++PVI E LYN Sbjct: 20 LERDDNVVVYGQDVGYFGGVFRCTEGLQTKYGKSRVFDAPISESGIVGTAVGMGAYGLRPVVEIQFADYFYPASDQIVSEMARLRYRSAGEFIAPLTLRMPCGGGIYGGQTHSQSPEAMFTQVCGLRTVMPSNPYDAKGLLIASIECDDPVIFLEPKRLYN 180
BLAST of FC920713 vs. ExPASy Swiss-Prot
Match: ODBB_PSEAE (2-oxoisovalerate dehydrogenase subunit beta OS=Pseudomonas aeruginosa GN=bkdA2 PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 5.573e-25 Identity = 60/161 (37.27%), Postives = 86/161 (53.42%), Query Frame = 3 Query: 12 MDRDPHVFPMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYN 494 ++RD V G+DVG++GG ++ T+GL KYG RV D PI+E+ G +G GLRP+VE ++ A +Q+ + L Y S G F G HSQ E+ F + G++ V S PY+AKGL+ A I +++PVI E LYN Sbjct: 31 LERDDDVVVFGQDVGYFGGVFRCTEGLQKKYGTSRVFDAPISESGIIGAAVGMGAYGLRPVVEIQFADYVYPASDQLISEAARLRYRSAGDFIVPMTVRMPCGGGIYGGQTHSQSPEAMFTQVCGLRTVMPSNPYDAKGLLIACIENDDPVIFLEPKRLYN 191
BLAST of FC920713 vs. ExPASy Swiss-Prot
Match: ODBB_BOVIN (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Bos taurus GN=BCKDHB PE=1 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 2.341e-23 Identity = 65/174 (37.36%), Postives = 89/174 (51.15%), Query Frame = 3 Query: 3 EEEMDRDPHVFPMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGA-EHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYN-L*ERIPDE 518 + + +DP GEDV +GG ++ T GL DKYG RV +TP+ E G GIG A+TG I E ++ AF+QI N Y SG F GA HSQ E++F PGI++V +P+ AKGL+ + I +NP I FE +LY E++P E Sbjct: 82 DNSLAKDPTAVIFGEDVA-FGGVFRCTVGLRDKYGKDRVFNTPLCEQGIVGFGIGIAVTGATAIAEIQFADYIFPAFDQIVNEAAKYRYRSGDLFNCGSLTIRSPWGCVGHGALYHSQSPEAFFAHCPGIKVVVPRSPFQAKGLLLSCIEDKNPCIFFEPKILYRAAVEQVPVE 254
BLAST of FC920713 vs. ExPASy Swiss-Prot
Match: ODBB_RAT (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Rattus norvegicus GN=Bckdhb PE=1 SV=3) HSP 1 Score: 107.842 bits (268), Expect = 3.058e-23 Identity = 65/174 (37.36%), Postives = 89/174 (51.15%), Query Frame = 3 Query: 3 EEEMDRDPHVFPMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGA-EHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYN-L*ERIPDE 518 + + +DP GEDV +GG ++ T GL DKYG RV +TP+ E G GIG A+TG I E ++ AF+QI N Y SG F GA HSQ E++F PGI++V +P+ AKGL+ + I +NP I FE +LY E++P E Sbjct: 80 DNSLAKDPTAVIFGEDVA-FGGVFRCTVGLRDKYGKDRVFNTPLCEQGIVGFGIGIAVTGATAIAEIQFADYIFPAFDQIVNEAAKYRYRSGDLFNCGSLTIRAPWGCVGHGALYHSQSPEAFFAHCPGIKVVIPRSPFQAKGLLLSCIEDKNPCIFFEPKILYRAAVEQVPVE 252
BLAST of FC920713 vs. ExPASy Swiss-Prot
Match: ODBB_MOUSE (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Mus musculus GN=Bckdhb PE=2 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 3.058e-23 Identity = 65/174 (37.36%), Postives = 89/174 (51.15%), Query Frame = 3 Query: 3 EEEMDRDPHVFPMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGA-EHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYN-L*ERIPDE 518 + + +DP GEDV +GG ++ T GL DKYG RV +TP+ E G GIG A+TG I E ++ AF+QI N Y SG F GA HSQ E++F PGI++V +P+ AKGL+ + I +NP I FE +LY E++P E Sbjct: 80 DNSLAKDPTAVIFGEDVA-FGGVFRCTVGLRDKYGKDRVFNTPLCEQGIVGFGIGIAVTGATAIAEIQFADYIFPAFDQIVNEAAKYRYRSGDLFNCGSLTIRAPWGCVGHGALYHSQSPEAFFAHCPGIKVVIPRSPFQAKGLLLSCIEDKNPCIFFEPKILYRAAVEQVPVE 252
BLAST of FC920713 vs. ExPASy Swiss-Prot
Match: ODBB_HUMAN (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Homo sapiens GN=BCKDHB PE=1 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 3.994e-23 Identity = 62/164 (37.80%), Postives = 84/164 (51.22%), Query Frame = 3 Query: 3 EEEMDRDPHVFPMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGA-EHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY 491 + + +DP GEDV +GG ++ T GL DKYG RV +TP+ E G GIG A+TG I E ++ AF+QI N Y SG F GA HSQ E++F PGI++V +P+ AKGL+ + I +NP I FE +LY Sbjct: 82 DNSLAKDPTAVIFGEDVA-FGGVFRCTVGLRDKYGKDRVFNTPLCEQGIVGFGIGIAVTGATAIAEIQFADYIFPAFDQIVNEAAKYRYRSGDLFNCGSLTIRSPWGCVGHGALYHSQSPEAFFAHCPGIKVVIPRSPFQAKGLLLSCIEDKNPCIFFEPKILY 244
BLAST of FC920713 vs. ExPASy Swiss-Prot
Match: ODPB_LEIXX (Pyruvate dehydrogenase E1 component subunit beta OS=Leifsonia xyli subsp. xyli GN=pdhB PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 8.897e-23 Identity = 58/157 (36.94%), Postives = 85/157 (54.14%), Query Frame = 3 Query: 21 DPHVFPMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY 491 DP V +GEDVG GG ++VT+GL ++G RV+DTP+AE G IG AM G RP+VE GF+ F+QI+ + G + H + E+YF G+++VA STP++A +++ AI S++PVI FE + Y Sbjct: 34 DPKVLILGEDVGPLGGVFRVTEGLQSEFGASRVVDTPLAEAGIVGTAIGLAMRGYRPVVEIQFNGFVFPGFDQITTQLAKMANRHSGAVSMPVVIRIPHGGHIGAVEHHQEAPEAYFAHTAGLRIVAPSTPHDAYWMIQEAIASDDPVIFFEPMSRY 190 The following BLAST results are available for this feature:
BLAST of FC920713 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920713 ID=FC920713; Name=FC920713; organism=Citrus clementina; type=EST; length=522bpback to top |