FC920729

Overview
NameFC920729
Unique NameFC920729
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length582
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920729 vs. ExPASy Swiss-Prot
Match: GTR10_XENLA (Solute carrier family 2, facilitated glucose transporter member 10 OS=Xenopus laevis GN=slc2a10 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.253e-13
Identity = 38/144 (26.39%), Postives = 80/144 (55.56%), Query Frame = 2
Query:  146 VVLSTFVAVCGSYVFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIADITPKNLRGGFTTVHQLMICIGVSMTY 577
            +VL+   ++ G  +FG  +G  S A   +     L+  E     S +  GA++ +++ G I D  GRR ++  S++V + G +I++ + + WWL +GR+ VG+ + + S    +Y+++I   + RG   ++++  I +G+ ++Y
Sbjct:    8 LVLAATSSLLGGLIFGYELGIISGALLMLKTVFQLTCFEQEALVSAVLFGALLASLIGGFIIDRSGRRTSIMGSNLVVLAGSIILIATSSFWWLVVGRVTVGFAISISSMACCIYVSEIVRPHQRGTLVSLYETGITVGILISY 151          
BLAST of FC920729 vs. ExPASy Swiss-Prot
Match: PLT4_ARATH (Probable polyol transporter 4 OS=Arabidopsis thaliana GN=PLT4 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.636e-13
Identity = 44/145 (30.34%), Postives = 78/145 (53.79%), Query Frame = 2
Query:  146 VVLSTFVAVCGSYVFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIADITPKNLRGGFTTVHQLMICIGVSMTYL 580
            V+   F A   + + G  +G  S A   I  DL ++  +  +    L+I ++ G++  G+ +D IGR+ TM  + +V   G  ++  + +   L +GR L G G+GL   + PVYIA+I+P   RG FT+  ++ I +G+ + Y+
Sbjct:   55 VMACAFFASLNNVLLGYDVGVMSGAVLFIQQDLKITEVQTEVLIGSLSIISLFGSLAGGRTSDSIGRKWTMALAALVFQTGAAVMAVAPSFEVLMIGRTLAGIGIGLGVMIAPVYIAEISPTVARGFFTSFPEIFINLGILLGYV 199          
BLAST of FC920729 vs. ExPASy Swiss-Prot
Match: GTR5_HORSE (Solute carrier family 2, facilitated glucose transporter member 5 OS=Equus caballus GN=SLC2A5 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.636e-13
Identity = 53/158 (33.54%), Postives = 88/158 (55.70%), Query Frame = 2
Query:  146 VVLSTFVAVCGS-YVFG-SAIGYSSPAQ--SGITNDLGLS-----VAEYSLF------GSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLD---LGRLLVGYGMGLLSYVVPVYIADITPKNLRGGFTTVHQLMICIGV 565
            + L+T +A  GS + +G +    +SPA+      N+   S     ++E+SL        S+   G  +G++M G + + +GR+GT+ F++I  I+  +++  SK A   +   L RLLVG   GL S VVP+Y+ +++PKNLRG    V QL I +G+
Sbjct:   17 LALATLIAAFGSSFQYGYNVAAVNSPAELMKAFYNETHYSRFSEYISEFSLTLLWSISVSMFPFGGFVGSLMVGPLVNRLGRKGTLLFNNIFSIVPAILMGTSKTARSYEMIILSRLLVGICAGLSSNVVPMYLGELSPKNLRGALGVVPQLFITVGI 174          
BLAST of FC920729 vs. ExPASy Swiss-Prot
Match: GTR4_BOVIN (Solute carrier family 2, facilitated glucose transporter member 4 OS=Bos taurus GN=SLC2A4 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 1.636e-13
Identity = 50/161 (31.06%), Postives = 81/161 (50.31%), Query Frame = 2
Query:  146 VVLSTFVAVCGSYVFGSAIGYSSPAQSGITNDL------------------GLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAW---WLDLGRLLVGYGMGLLSYVVPVYIADITPKNLRGGFTTVHQLMICIGV 565
            +VL+ F AV GS  FG  IG  +  Q  I                      G     ++L  +I ++G MI + + G I+ ++GR+  M F++ + ++G  ++  +KAA     L LGR  +G   GL S +VP+Y+ +I P +LRG   T++QL I  G+
Sbjct:   24 LVLAVFSAVLGSLQFGYNIGVINAPQKVIEQSYNETWLGRQGPEGPGSIPPGTLTTLWALSVAIFSVGGMISSFLIGIISQWLGRKRAMLFNNALAVLGGTLMGLAKAAASYEMLILGRFFIGAYSGLTSGLVPMYVGEIAPTHLRGALGTLNQLAIVTGI 184          
BLAST of FC920729 vs. ExPASy Swiss-Prot
Match: HXT14_YEAST (Hexose transporter HXT14 OS=Saccharomyces cerevisiae GN=HXT14 PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 2.137e-13
Identity = 49/161 (30.43%), Postives = 81/161 (50.31%), Query Frame = 2
Query:  149 VLSTFVAVCGSYVFGSAIG--------YSSPAQSGITNDLG-----------LSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWW-LDLGRLLVGYGMGLLSYVVPVYIADITPKNLRGGFTTVHQLMICIGVSM 571
            VL   V   G ++FG  IG         S   + G TN +            L+  +  L  SI  I   +GA+   KI D+IGR+G + F+ +V  IG  I + S   W+ L LGR + G G+G+ + +VP+++++ +P  +RG   + +QL++  G+ M
Sbjct:   61 VLLCLVISLGGFIFGWDIGTIGGMTNMVSFQEKFGTTNIIHDDETIFVSTKKLTDLQIGLIISIFNISCGVGALTLSKIGDWIGRKGGIWFALVVYCIGITIQILSYGRWYFLTLGRAVTGIGVGVTTVLVPMFLSENSPLKIRGSMVSTYQLIVTFGILM 221          
BLAST of FC920729 vs. ExPASy Swiss-Prot
Match: GTR4_HUMAN (Solute carrier family 2, facilitated glucose transporter member 4 OS=Homo sapiens GN=SLC2A4 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.137e-13
Identity = 50/161 (31.06%), Postives = 82/161 (50.93%), Query Frame = 2
Query:  146 VVLSTFVAVCGSYVFGSAIGYSSPAQSGITNDL------------------GLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAW---WLDLGRLLVGYGMGLLSYVVPVYIADITPKNLRGGFTTVHQLMICIGV 565
            +VL+ F AV GS  FG  IG  +  Q  I                      G     ++L  +I ++G MI + + G I+ ++GR+  M  ++++ ++G  ++  + AA     L LGR L+G   GL S +VP+Y+ +I P +LRG   T++QL I IG+
Sbjct:   24 LVLAVFSAVLGSLQFGYNIGVINAPQKVIEQSYNETWLGRQGPEGPSSIPPGTLTTLWALSVAIFSVGGMISSFLIGIISQWLGRKRAMLVNNVLAVLGGSLMGLANAAASYEMLILGRFLIGAYSGLTSGLVPMYVGEIAPTHLRGALGTLNQLAIVIGI 184          
BLAST of FC920729 vs. ExPASy Swiss-Prot
Match: GTR4_RAT (Solute carrier family 2, facilitated glucose transporter member 4 OS=Rattus norvegicus GN=Slc2a4 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.791e-13
Identity = 49/161 (30.43%), Postives = 82/161 (50.93%), Query Frame = 2
Query:  146 VVLSTFVAVCGSYVFGSAIGYSSPAQSGITNDL------------------GLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLD---LGRLLVGYGMGLLSYVVPVYIADITPKNLRGGFTTVHQLMICIGV 565
            +VL+ F AV GS  FG  IG  +  Q  I                      G     ++L  +I ++G MI + + G I+ ++GR+  M  ++++ ++G  ++  + AA   +   LGR L+G   GL S +VP+Y+ +I P +LRG   T++QL I IG+
Sbjct:   24 LVLAVFSAVLGSLQFGYNIGVINAPQKVIEQSYNATWLGRQGPGGPDSIPQGTLTTLWALSVAIFSVGGMISSFLIGIISQWLGRKRAMLANNVLAVLGGALMGLANAAASYEILILGRFLIGAYSGLTSGLVPMYVGEIAPTHLRGALGTLNQLAIVIGI 184          
BLAST of FC920729 vs. ExPASy Swiss-Prot
Match: GTR3_SHEEP (Solute carrier family 2, facilitated glucose transporter member 3 OS=Ovis aries GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.791e-13
Identity = 49/157 (31.21%), Postives = 83/157 (52.87%), Query Frame = 2
Query:  146 VVLSTFVAVCGSYVFGSAIGYSSPAQSGITNDLGLSVAE--------------YSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLD---LGRLLVGYGMGLLSYVVPVYIADITPKNLRGGFTTVHQLMICIGV 565
            ++ +  +A  GS+ FG   G  +  ++ I + L  ++ E              +SL  +I ++G MIG+   G   +  GRR +M   +++ I G  ++ F K A  ++   LGRL++G   GL +  VP+YI +I+P  LRG F T++QL I IG+
Sbjct:   10 LIFAISIATIGSFQFGYNTGVINAPEAIIKDFLNYTLEERSETPPSSVLLTSLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLIVNLLAIAGGCLMGFCKIAESVEMLILGRLIIGLFCGLCTGFVPMYIGEISPTALRGAFGTLNQLGIVIGI 166          
BLAST of FC920729 vs. ExPASy Swiss-Prot
Match: GTR3_CANFA (Solute carrier family 2, facilitated glucose transporter member 3 OS=Canis familiaris GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.791e-13
Identity = 48/157 (30.57%), Postives = 83/157 (52.87%), Query Frame = 2
Query:  146 VVLSTFVAVCGSYVFGSAIGYSSPAQSGITNDLGLSVAE--------------YSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLD---LGRLLVGYGMGLLSYVVPVYIADITPKNLRGGFTTVHQLMICIGV 565
            ++ +  +A  GS+ FG   G  +  ++ I + L  ++ E              +SL  +I ++G MIG+   G   +  GRR +M   +++ + G  ++ F K A  ++   LGRL++G   GL +  VP+YI +I+P  LRG F T++QL I IG+
Sbjct:   10 LIFALSIATIGSFQFGYNTGVINAPETIIKDFLNYTLEEKSENLPTEVLLTSLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLMVNLLAVAGGCLMGFCKIAQSVEMLILGRLIIGLFCGLCTGFVPMYIGEISPTALRGAFGTLNQLGIVIGI 166          
BLAST of FC920729 vs. ExPASy Swiss-Prot
Match: GTR12_HUMAN (Solute carrier family 2, facilitated glucose transporter member 12 OS=Homo sapiens GN=SLC2A12 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.645e-13
Identity = 45/143 (31.47%), Postives = 75/143 (52.45%), Query Frame = 2
Query:  152 LSTFVAVCGSYVFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIADITPKNLRGGFTTVHQLMICIGVSMTYL 580
            LS+  A     + G  +G  S A   I   L LS  E  +  S L IGA++ ++  G + D  GRR  +  S  +  +G ++++ S +   L +GR+ +G  + L S    VYIA+I P++ RG   ++++LMI IG+   Y+
Sbjct:   42 LSSVTAAVSGLLVGYELGIISGALLQIKTLLALSCHEQEMVVSSLVIGALLASLTGGVLIDRYGRRTAIILSSCLLGLGSLVLILSLSYTVLIVGRIAIGVSISLSSIATCVYIAEIAPQHRRGLLVSLNELMIVIGILSAYI 184          
The following BLAST results are available for this feature:
BLAST of FC920729 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
GTR10_XENLA1.253e-1326.39Solute carrier family 2, facilitated glucose trans... [more]
PLT4_ARATH1.636e-1330.34Probable polyol transporter 4 OS=Arabidopsis thali... [more]
GTR5_HORSE1.636e-1333.54Solute carrier family 2, facilitated glucose trans... [more]
GTR4_BOVIN1.636e-1331.06Solute carrier family 2, facilitated glucose trans... [more]
HXT14_YEAST2.137e-1330.43Hexose transporter HXT14 OS=Saccharomyces cerevisi... [more]
GTR4_HUMAN2.137e-1331.06Solute carrier family 2, facilitated glucose trans... [more]
GTR4_RAT2.791e-1330.43Solute carrier family 2, facilitated glucose trans... [more]
GTR3_SHEEP2.791e-1331.21Solute carrier family 2, facilitated glucose trans... [more]
GTR3_CANFA2.791e-1330.57Solute carrier family 2, facilitated glucose trans... [more]
GTR12_HUMAN3.645e-1331.47Solute carrier family 2, facilitated glucose trans... [more]

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Properties
Property NameValue
Genbank descriptionC32012C09EF RVDevelop1 Citrus clementina cDNA clone C32012C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920729 ID=FC920729; Name=FC920729; organism=Citrus clementina; type=EST; length=582bp
TGTGAAATTTTTGTGATCTCTGGCAAAGAAAGTGTTACCGGAAGAAGGGT
TATCGAGCTCTTTGCTTAAGGAGAAGTCTCAGGTACATGGTGCTGGCAGT
AGTGGCGGTGAGAGTGGAAGTGGAAGTGCTTCTGCCACAAGTGCTGTTGT
GCTCAGCACTTTCGTTGCTGTCTGTGGTTCCTATGTTTTTGGTTCTGCTA
TTGGGTATTCATCACCTGCTCAGTCTGGAATAACCAATGATCTTGGTCTT
TCTGTCGCGGAGTATTCACTTTTCGGTTCAATATTGACGATCGGAGCTAT
GATAGGTGCAATAATGAGTGGGAAAATAGCGGATTACATTGGCCGAAGAG
GTACAATGGGCTTCTCAGACATAGTTTGCATCATTGGATGGGTTATAATT
GTATTCTCGAAGGCTGCTTGGTGGCTAGATCTTGGAAGGCTGTTGGTGGG
ATATGGGATGGGTCTCCTTTCTTACGTGGTACCTGTGTATATAGCTGATA
TCACACCCAAAAATCTTCGAGGAGGATTTACAACAGTCCATCAGTTGATG
ATATGTATTGGCGTGTCAATGACATATCTCAT
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