FC920729

Overview
NameFC920729
Unique NameFC920729
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length582
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920729 vs. ExPASy Swiss-Prot
Match: GTR4_PIG (Solute carrier family 2, facilitated glucose transporter member 4 (Fragment) OS=Sus scrofa GN=SLC2A4 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.173e-11
Identity = 47/155 (30.32%), Postives = 77/155 (49.68%), Query Frame = 2
Query:  146 VVLSTFVAVCGSYVFGSAIGYSSPAQSGITNDL------------------GLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAW---WLDLGRLLVGYGMGLLSYVVPVYIADITPKNLRGGFTTVHQL 547
            +VL+ F AV GS  FG  IG  +  Q  I                      G     ++L  +I ++G M  + + G I+ ++GR+  M F++ + ++   ++  +KAA     L LGR L+G   GL S +VP+Y+ +I P +LRG   T++QL
Sbjct:   19 LVLAVFSAVLGSLQFGYNIGVINAPQKVIEQSYNETWLGRQGPNGPGSIPPGTLTTLWALSVAIFSVGGMFSSFLLGIISQWLGRKKAMLFNNTLAVLAGALMGLAKAAASYEMLILGRFLIGAYSGLASGLVPMYVGEIAPTHLRGALGTLNQL 173          
BLAST of FC920729 vs. ExPASy Swiss-Prot
Match: GTR1_RABIT (Solute carrier family 2, facilitated glucose transporter member 1 OS=Oryctolagus cuniculus GN=SLC2A1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.173e-11
Identity = 37/104 (35.58%), Postives = 61/104 (58.65%), Query Frame = 2
Query:  263 YSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAW---WLDLGRLLVGYGMGLLSYVVPVYIADITPKNLRGGFTTVHQLMICIGV 565
            +SL  +I ++G MIG+   G   +  GRR +M   +++  +  V++ FSK A     L LGR ++G   GL +  VP+Y+ +++P  LRG   T+HQL I +G+
Sbjct:   65 WSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLMMNLLAFVSAVLMGFSKLAKSFEMLILGRFIIGVYCGLTTGFVPMYVGEVSPTALRGALGTLHQLGIVVGI 168          
BLAST of FC920729 vs. ExPASy Swiss-Prot
Match: HXT5_YEAST (Probable glucose transporter HXT5 OS=Saccharomyces cerevisiae GN=HXT5 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.532e-11
Identity = 52/162 (32.10%), Postives = 80/162 (49.38%), Query Frame = 2
Query:  161 FVAVC------GSYVFGSAIG--------------YSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCI--IGWVIIVFSKAAWW-LDLGRLLVGYGMGLLSYVVPVYIADITPKNLRGGFTTVHQLMICIGVSMTY 577
            FV+VC      G +VFG   G              + S   +G T    LS     L  SI  IG  IG I+  K+ D  GR+  +G   +V I  IG +I + S   W+   +GR++ G G+G ++ + P+ I++++PK LRG   + +QLMI  G+ + Y
Sbjct:   85 FVSVCCLMVAFGGFVFGWDTGTISGFVRQTDFIRRFGSTRANGTTY---LSDVRTGLMVSIFNIGCAIGGIVLSKLGDMYGRK--IGLMTVVVIYSIGIIIQIASIDKWYQYFIGRIISGLGVGGITVLAPMLISEVSPKQLRGTLVSCYQLMITFGIFLGY 241          
BLAST of FC920729 vs. ExPASy Swiss-Prot
Match: HXT3_YEAST (Low-affinity glucose transporter HXT3 OS=Saccharomyces cerevisiae GN=HXT3 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.532e-11
Identity = 46/146 (31.51%), Postives = 74/146 (50.68%), Query Frame = 2
Query:  176 GSYVFGSAIGYSSP--AQSGITNDLG---------LSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWW-LDLGRLLVGYGMGLLSYVVPVYIADITPKNLRGGFTTVHQLMICIGVSMTY 577
            G +VFG   G  S   AQ+      G         LS     L  SI  IG  IG I+  K+ D  GR+  +    ++ IIG +I + S   W+   +GR++ G G+G ++ + P+ I+++ PK +RG   + +QLMI +G+ + Y
Sbjct:   72 GGFVFGWDTGTISGFVAQTDFLRRFGMKHKDGSYYLSKVRTGLIVSIFNIGCAIGGIILAKLGDMYGRKMGLIVVVVIYIIGIIIQIASINKWYQYFIGRIISGLGVGGIAVLSPMLISEVAPKEMRGTLVSCYQLMITLGIFLGY 217          
BLAST of FC920729 vs. ExPASy Swiss-Prot
Match: GTR5_PONAB (Solute carrier family 2, facilitated glucose transporter member 5 OS=Pongo abelii GN=SLC2A5 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.532e-11
Identity = 37/104 (35.58%), Postives = 62/104 (59.62%), Query Frame = 2
Query:  263 YSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDL---GRLLVGYGMGLLSYVVPVYIADITPKNLRGGFTTVHQLMICIGV 565
            +S+  S+   G  IG+++ G + +  GR+G + F++I  I+  +++  S+ A   +L    RLLVG   G+ S VVP+Y+ ++ PKNLRG    V QL I +G+
Sbjct:   71 WSVTVSMFPFGGFIGSLLVGPLVNKFGRKGALLFNNIFSIVPAILMGCSRVAKSFELIIISRLLVGICAGVSSNVVPMYLGELAPKNLRGALGVVPQLFITVGI 174          
BLAST of FC920729 vs. ExPASy Swiss-Prot
Match: GTR3_PONAB (Solute carrier family 2, facilitated glucose transporter member 3 OS=Pongo abelii GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.532e-11
Identity = 45/157 (28.66%), Postives = 79/157 (50.32%), Query Frame = 2
Query:  146 VVLSTFVAVCGSYVFGSAIGYSSPAQSGITNDLGLSVAE--------------YSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLD---LGRLLVGYGMGLLSYVVPVYIADITPKNLRGGFTTVHQLMICIGV 565
            ++ +  VA  GS+ FG   G  +  +  I   +  ++ +              +SL  +I ++G MIG+   G   +  GRR +M   +++ + G   +   K A  ++   LGRL++G   GL +  VP+YI +I+P  LRG F T++QL I +G+
Sbjct:   10 LIFAITVATIGSFQFGYNTGVINAPEKIIKEFINKTLTDKGNAPPSEVLLTSLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLIVNLLAVTGGCFMGLCKVAKSVEMLILGRLIIGLFCGLCTGFVPMYIGEISPTALRGAFGTLNQLGIVVGI 166          
BLAST of FC920729 vs. ExPASy Swiss-Prot
Match: GTR12_MOUSE (Solute carrier family 2, facilitated glucose transporter member 12 OS=Mus musculus GN=Slc2a12 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.532e-11
Identity = 42/143 (29.37%), Postives = 73/143 (51.05%), Query Frame = 2
Query:  152 LSTFVAVCGSYVFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIADITPKNLRGGFTTVHQLMICIGVSMTYL 580
            L++  A     + G  +G  S A   I   L L+  E  +  S L IGA + ++  G + D  GRR  +  S  +  +G ++++ S +   L +GR+ +G  + L S    VYIA+I P++ RG   ++++LMI  G+   Y+
Sbjct:   46 LTSVTAAISGLLVGYELGLISGALLQIRTLLALTCHEQEMVVSSLLIGAFLASLTGGVLIDRYGRRLAIILSSCLLGLGSLVLIMSLSYTLLIMGRVAIGVSISLSSIATCVYIAEIAPQHRRGLLVSLNELMIVTGILFAYI 188          
BLAST of FC920729 vs. ExPASy Swiss-Prot
Match: XYLL3_ARATH (D-xylose-proton symporter-like 3 OS=Arabidopsis thaliana GN=At5g59250 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.000e-11
Identity = 46/152 (30.26%), Postives = 78/152 (51.32%), Query Frame = 2
Query:  146 VVLSTFVAVCGSYVFGSAIGYSS--------PAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIADITPKNLRGGFTTVHQLMICIGVSMTY 577
            V+L       G  +FG  IG +S        PA SG T     S  +  L  S    GA++G+I    +AD++GRR  +  + ++ ++G +I   +     L +GRLL G+G+GL  +  P+YIA+  P  +RG   ++ +L I +G+ + +
Sbjct:   98 VILPFIFPALGGLLFGYDIGATSGATLSLQSPALSG-TTWFNFSPVQLGLVVSGSLYGALLGSISVYGVADFLGRRRELIIAAVLYLLGSLITGCAPDLNILLVGRLLYGFGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGF 248          
BLAST of FC920729 vs. ExPASy Swiss-Prot
Match: MYCT_HUMAN (Proton myo-inositol cotransporter OS=Homo sapiens GN=SLC2A13 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.000e-11
Identity = 44/138 (31.88%), Postives = 67/138 (48.55%), Query Frame = 2
Query:  149 VLSTFVAVCGSYVFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIADITPKNLRGGFTTVHQLMICIG 562
            V++ F A+ G ++FG   G  S A   +   L L      L  S     A + A+  G +    GRR  +  +  +   G  ++  +     L  GRL+VG G+G+ S  VPVYIA+++P NLRG   T++ L I  G
Sbjct:   64 VVAVFSAL-GGFLFGYDTGVVSGAMLLLKRQLSLDALWQELLVSSTVGAAAVSALAGGALNGVFGRRAAILLASALFTAGSAVLAAANNKETLLAGRLVVGLGIGIASMTVPVYIAEVSPPNLRGRLVTINTLFITGG 200          
BLAST of FC920729 vs. ExPASy Swiss-Prot
Match: HXT7_YEAST (High-affinity hexose transporter HXT6 OS=Saccharomyces cerevisiae GN=HXT7 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.000e-11
Identity = 38/111 (34.23%), Postives = 64/111 (57.66%), Query Frame = 2
Query:  248 LSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWW-LDLGRLLVGYGMGLLSYVVPVYIADITPKNLRGGFTTVHQLMICIGVSMTY 577
            LS     L  SI  IG  IG I+  K+ D  GR+  +    ++ IIG +I + S   W+   +GR++ G G+G ++ + P+ I++++PK+LRG   + +QLMI  G+ + Y
Sbjct:  110 LSKVRTGLIVSIFNIGCAIGGIILSKLGDMYGRKVGLIVVVVIYIIGIIIQIASINKWYQYFIGRIISGLGVGGIAVLSPMLISEVSPKHLRGTLVSCYQLMITAGIFLGY 220          
The following BLAST results are available for this feature:
BLAST of FC920729 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
GTR4_PIG1.173e-1130.32Solute carrier family 2, facilitated glucose trans... [more]
GTR1_RABIT1.173e-1135.58Solute carrier family 2, facilitated glucose trans... [more]
HXT5_YEAST1.532e-1132.10Probable glucose transporter HXT5 OS=Saccharomyces... [more]
HXT3_YEAST1.532e-1131.51Low-affinity glucose transporter HXT3 OS=Saccharom... [more]
GTR5_PONAB1.532e-1135.58Solute carrier family 2, facilitated glucose trans... [more]
GTR3_PONAB1.532e-1128.66Solute carrier family 2, facilitated glucose trans... [more]
GTR12_MOUSE1.532e-1129.37Solute carrier family 2, facilitated glucose trans... [more]
XYLL3_ARATH2.000e-1130.26D-xylose-proton symporter-like 3 OS=Arabidopsis th... [more]
MYCT_HUMAN2.000e-1131.88Proton myo-inositol cotransporter OS=Homo sapiens ... [more]
HXT7_YEAST2.000e-1134.23High-affinity hexose transporter HXT6 OS=Saccharom... [more]

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Properties
Property NameValue
Genbank descriptionC32012C09EF RVDevelop1 Citrus clementina cDNA clone C32012C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920729 ID=FC920729; Name=FC920729; organism=Citrus clementina; type=EST; length=582bp
TGTGAAATTTTTGTGATCTCTGGCAAAGAAAGTGTTACCGGAAGAAGGGT
TATCGAGCTCTTTGCTTAAGGAGAAGTCTCAGGTACATGGTGCTGGCAGT
AGTGGCGGTGAGAGTGGAAGTGGAAGTGCTTCTGCCACAAGTGCTGTTGT
GCTCAGCACTTTCGTTGCTGTCTGTGGTTCCTATGTTTTTGGTTCTGCTA
TTGGGTATTCATCACCTGCTCAGTCTGGAATAACCAATGATCTTGGTCTT
TCTGTCGCGGAGTATTCACTTTTCGGTTCAATATTGACGATCGGAGCTAT
GATAGGTGCAATAATGAGTGGGAAAATAGCGGATTACATTGGCCGAAGAG
GTACAATGGGCTTCTCAGACATAGTTTGCATCATTGGATGGGTTATAATT
GTATTCTCGAAGGCTGCTTGGTGGCTAGATCTTGGAAGGCTGTTGGTGGG
ATATGGGATGGGTCTCCTTTCTTACGTGGTACCTGTGTATATAGCTGATA
TCACACCCAAAAATCTTCGAGGAGGATTTACAACAGTCCATCAGTTGATG
ATATGTATTGGCGTGTCAATGACATATCTCAT
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