FC920733
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920733 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 9.700e-59 Identity = 105/166 (63.25%), Postives = 129/166 (77.71%), Query Frame = 3 Query: 174 KIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCY---RYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPS 662 KIISR MF+ +L +RN+ CPA+GFYTYDAF+ AAK+FP+FG +G+ +RKRE+AAF QT ETTGGWP AP G YAWGYC++++ P+S+YC RY PC YYGRGP+QL+WN NY CGEAL V+LL NPDL+ATD VLSFK+A+WFWMT Q PKPS Sbjct: 4 KIISRSMFDQMLKHRNNPACPAKGFYTYDAFLAAAKSFPSFGTTGSTDVRKRELAAFLGQTSHETTGGWPSAPDGPYAWGYCFLKE-RNPSSNYCAPSPRY-PCAPGKSYYGRGPLQLSWNYNYGPCGEALRVNLLGNPDLVATDRVLSFKTALWFWMTPQAPKPS 167
BLAST of FC920733 vs. ExPASy Swiss-Prot
Match: CHI4_SOLTU (Endochitinase 4 (Fragment) OS=Solanum tuberosum GN=CHTB4 PE=2 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 9.700e-59 Identity = 110/194 (56.70%), Postives = 133/194 (68.56%), Query Frame = 3 Query: 90 GGSAQNCGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARG-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYR--YCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPS 662 G C SG G G GG++G +IS MF+ +L +RND C + FY+Y+AFI AA++F FG +G+ T RKREIAAFFAQT ETTGGWP AP G YAWGYC++R+ P DYC PC +Y+GRGPIQ++ N NY CG A+GVDLLNNPDL+ATDPV+SFKSAIWFWMT Q PKPS Sbjct: 52 GKCQSQCPSGPSPKPPTPGPGPSGGDIGSVISNSMFDQMLKHRNDNACQGKNNFYSYNAFINAARSFGGFGTTGDTTARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPG-DYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSAIWFWMTPQSPKPS 244
BLAST of FC920733 vs. ExPASy Swiss-Prot
Match: CHIT_SOLTU (Endochitinase OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 2.161e-58 Identity = 110/196 (56.12%), Postives = 135/196 (68.88%), Query Frame = 3 Query: 90 GGSAQNCGSGVVCGERDTGHGTD---GGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC--YRYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPS 662 G + CGSG C + G G GG+LG IS MF+ +L +RN+ C + FY+Y+AFI AA++FP FG SG+ RKREIAAFFAQT ETTGGW AP G YAWGYC++R+ P DYC PC +Y+GRGPIQ++ N NY CG A+GVDLLNNPDL+ATDPV+SFK+A+WFWMT Q PKPS Sbjct: 51 GNTNDYCGSGN-CQSQCPGGGPGPGPGGDLGSAISNSMFDQMLKHRNENSCQGKNFYSYNAFINAARSFPGFGTSGDINARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLRERGNP-GDYCPPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTPQSPKPS 244
BLAST of FC920733 vs. ExPASy Swiss-Prot
Match: CHI1_SOLTU (Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.073e-57 Identity = 111/194 (57.22%), Postives = 134/194 (69.07%), Query Frame = 3 Query: 90 GGSAQNCGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARG-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC--YRYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPS 662 G + CG G C + G G+LG +IS MF+ +L +RND C +G FY+Y+AFI AA +FP FG +G+ T RKREIAAFFAQT ETTGGWP AP G YAWGYC++R+ P DYC PC +Y+GRGPIQ++ N NY CG A+GVDLLNNPDL+ATD V+SFKSAIWFWMT Q PKPS Sbjct: 43 GDTNDYCGPGN-CQSQCPGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSP-GDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPS 234
BLAST of FC920733 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2) HSP 1 Score: 222.631 bits (566), Expect = 1.401e-57 Identity = 109/192 (56.77%), Postives = 130/192 (67.71%), Query Frame = 3 Query: 90 GGSAQNCGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVS-RPASDYCYRYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPS 662 GG + G G D G D G L II + F+ LL +RND RCPA GFYTY+AFI AAK FP FGN+G++ MRKREIAAF QT ETTGGWPDAP G YAWGYCY+++++ +P D Y C QY GRGPIQL+WN NY CG+ L + LL P+L+ TDPV+SFK+AIWFWM Q PKPS Sbjct: 63 GGGGGDGGDDGCDGGDDGGGDGDDGYLSDIIPKSKFDALLKFRNDARCPAAGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETTGGWPDAPCGPYAWGYCYLKEINCQPYCDPSSNY-QCVAGKQYCGRGPIQLSWNYNYGLCGDDLKLPLLQEPELVETDPVISFKTAIWFWMKPQSPKPS 253
BLAST of FC920733 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.389e-57 Identity = 109/194 (56.19%), Postives = 134/194 (69.07%), Query Frame = 3 Query: 90 GGSAQNCGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARG-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCY--RYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPS 662 G + + CG G C + G G+LG +IS MF+ +L +RND C + FY+Y+AF+ AA +FP FG +G+ T RKREIAAF AQT ETTGGWP AP G YAWGYC++R+ P DYC PC +Y+GRGPIQ++ N NY CG A+GVDLLNNPDL+ATDPV+SFKSAIWFWMT Q PKPS Sbjct: 47 GNTNEYCGPGN-CQSQCPGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKNNFYSYNAFVTAAGSFPGFGTTGDITARKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPG-DYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSAIWFWMTPQSPKPS 238
BLAST of FC920733 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2) HSP 1 Score: 221.476 bits (563), Expect = 3.120e-57 Identity = 115/197 (58.38%), Postives = 136/197 (69.04%), Query Frame = 3 Query: 84 VLGGSAQNCGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGG--WPDAPGGEYAWGYCYIRQVSRPASDYCYR--YCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPS 662 V G +Q GSG G G L +ISRE F +L +RND CPARGFYTYDAFI AA++FPAF +G++ RKREIAAF AQT ETTGG W AP G YAWGYCY R+++ P+S YC PC QY+GRGP+QL+WN NY +CG A+GVDLLNNPDLL++DP +SFKSA WFWMT Q PKPS Sbjct: 33 VPGCQSQCSGSGPAPGP---------GGLTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWA-APDGPYAWGYCYNRELNPPSS-YCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTPQSPKPS 218
BLAST of FC920733 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 1.549e-56 Identity = 109/194 (56.19%), Postives = 132/194 (68.04%), Query Frame = 3 Query: 90 GGSAQNCGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARG-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCY--RYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPS 662 G + CG G C + G G+LG +IS MF+ +L +RND C + FY+Y+AFI AA +FP FG +G+ T RKREIAAF AQT ETTGGWP AP G YAWGYC++R+ P DYC PC +Y+GRGPIQ++ N NY CG A+GVDLLNNPDL+ATD V+SFKSAIWFWMT Q PKPS Sbjct: 43 GNTNDYCGPGN-CQSQCPGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKNNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFLAQTSHETTGGWPSAPDGPYAWGYCFLREQGSPG-DYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPS 234
BLAST of FC920733 vs. ExPASy Swiss-Prot
Match: CHI3_TOBAC (Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 2.023e-56 Identity = 111/204 (54.41%), Postives = 137/204 (67.16%), Query Frame = 3 Query: 90 GGSAQNCGSGVVCGERDTGHG--------TDG---GELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYCPCP-LPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPS 662 G + CG G + +G G T G G++ IIS MF+ +L +RND C + FYTY+AFI AA++F FG +G+ T RKRE+AAFFAQT ETTGGW AP G YAWGYCY+R+ P S YC + P PGQ YYGRGPIQ+++N NY CG A+G +LLNNPDL+AT+ V+SFKSAIWFWMTAQ PKPS Sbjct: 48 GNTQDYCGPGKCQSQCPSGPGPTPRPPTPTPGPSTGDISNIISSSMFDQMLKHRNDNTCQGKSFYTYNAFITAARSFRGFGTTGDTTRRKREVAAFFAQTSHETTGGWDTAPDGRYAWGYCYLREQGNPPS-YCVQSSQWPCAPGQKYYGRGPIQISYNYNYGPCGRAIGQNLLNNPDLVATNAVVSFKSAIWFWMTAQSPKPS 250
BLAST of FC920733 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 2.642e-56 Identity = 116/230 (50.43%), Postives = 144/230 (62.61%), Query Frame = 3 Query: 57 LIFSLALSFVLGGSAQNCGS---------GVVCGE----------------RDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARG-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCY--RYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPS 662 L+FS+ L L SA+ CGS G+ C + + G G+LG +IS MF+ +L +RND C +G FY+Y+AFI AA +FP FG +G+ T RKREIAAFFAQT ETTGGW AP G YAWGYC++R+ P DYC PC +Y+GRGPIQ++ N NY CG A+GVDLLNNPDL+ATD ++SFKSAIWFWMT Q PKPS Sbjct: 7 LLFSVLL---LSASAEQCGSQAGGALCASGLCCSKFGWCGNTNDYCGPGNCQSQCPGGSPGDLGGVISNSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLREQGSPG-DYCTPSNQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSIISFKSAIWFWMTPQSPKPS 232 The following BLAST results are available for this feature:
BLAST of FC920733 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920733 ID=FC920733; Name=FC920733; organism=Citrus clementina; type=EST; length=662bpback to top |