FC920739
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS4_YEAST (26S protease regulatory subunit 4 homolog OS=Saccharomyces cerevisiae GN=RPT2 PE=1 SV=3) HSP 1 Score: 371.318 bits (952), Expect = 2.882e-102 Identity = 178/226 (78.76%), Postives = 211/226 (93.36%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 YYV ILSFVDK+ LEPGC++L+H+K +S+VG+LQD+ DPMVSVMK++K+P ESY+DIGGL++QIQEIKE+VELPLTHPELYE++GIKPPKGVILYG PGTGKTLLAKAVAN TSATFLR+VGSELIQKYLGDGP+L R++F+VA + +PSIVFIDEIDA+GTKRYD++SGGEREIQRTMLELLNQLDGFD RGDV+VI+ TN+IE+LDPAL+RPGRIDRKI F P Sbjct: 128 YYVSILSFVDKELLEPGCSVLLHHKTMSIVGVLQDDADPMVSVMKMDKSPTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENP 353
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS4_SCHPO (26S protease regulatory subunit 4 homolog OS=Schizosaccharomyces pombe GN=mts2 PE=2 SV=1) HSP 1 Score: 365.54 bits (937), Expect = 1.581e-100 Identity = 180/227 (79.30%), Postives = 206/227 (90.75%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFD-SRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 YYV I+SFVDKD LEPGC++L+H+K +S+VGLL D+ DPM++VMK++KAP ESYADIGGL++QIQEIKEAVELPLTHPELYE++GIKPPKGVILYG PGTGKTLLAKAVAN TSATFLRVVGSELIQKYLGDGP+LVR+LF A++ SPSIVFIDEIDA+GTKRYDA SG EREIQRTMLELLNQLDGFD S+ D++VI+ TNRI LDPAL+RPGRIDRKI F P Sbjct: 137 YYVSIMSFVDKDMLEPGCSVLLHHKAMSIVGLLLDDTDPMINVMKLDKAPTESYADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIGTKRYDAQSGAEREIQRTMLELLNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRKILFENP 363
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS4_ENCCU (26S protease regulatory subunit 4 homolog OS=Encephalitozoon cuniculi GN=RPT2 PE=1 SV=1) HSP 1 Score: 353.599 bits (906), Expect = 6.219e-97 Identity = 173/226 (76.55%), Postives = 205/226 (90.71%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 YYV I+SFVDKD LEPGC +L++ K SVVG+L+ E+DPMV+VMK+EKAP E+YADIGGL+ QIQEIKE+VELPLT+PELY+++GIKPPKGVILYG PGTGKTLLAKAVAN TSATFLRVVG+ELIQ+YLG+GPKLVRELFRVAD +PSI+FIDEIDA+G KRY+ SGG RE+QRTMLELLNQLDGFD+R D++VI+ TN+IE+LDPAL+RPGRIDRKI+F P Sbjct: 115 YYVNIMSFVDKDLLEPGCTVLLNYKDNSVVGVLEGEMDPMVNVMKLEKAPSETYADIGGLEEQIQEIKESVELPLTNPELYQEMGIKPPKGVILYGLPGTGKTLLAKAVANQTSATFLRVVGTELIQEYLGEGPKLVRELFRVADMHAPSIIFIDEIDAIGGKRYNTSSGGRREVQRTMLELLNQLDGFDTRNDIKVIMATNKIEALDPALIRPGRIDRKIEFGMP 340
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS6B_CAEEL (Probable 26S protease regulatory subunit 6B OS=Caenorhabditis elegans GN=rpt-3 PE=2 SV=1) HSP 1 Score: 288.115 bits (736), Expect = 3.209e-77 Identity = 133/226 (58.85%), Postives = 184/226 (81.42%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 YYV +LS +D++ L+PGC++ +H ++V +L E D + +++ ++ P SY DIGGLD Q QE++EAVELPLTH ELY+ IGI PP+GV++YG PG GKT+LAKAVA +T+A+F+RVVGSE +QKYLG+GP++VR++FR+A + SPSI+FIDEIDA+ TKR+DA +G +RE+QR +LELLNQ+DGFD +V+VI+ TNR ++LDPALLRPGR+DRKI+F P Sbjct: 107 YYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEADSSIQMLRPDEKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLP 332
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS6B_MANSE (26S protease regulatory subunit 6B OS=Manduca sexta PE=2 SV=1) HSP 1 Score: 281.952 bits (720), Expect = 2.299e-75 Identity = 130/226 (57.52%), Postives = 181/226 (80.09%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 YYV ILS +D++ L+P ++ +H ++V +L E D +S+++ ++ P Y+DIGG+D Q QEI+EAVELPLTH ELY IGI+PP+GV++YG PG GKT+LA AVA+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A + SP+I+FIDEIDA+ TKR+DA +G +RE+QR +LELLNQ+DGFD +V+VI+ TNR ++LDPALLRPGR+DRKI+F P Sbjct: 108 YYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLANAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLP 333
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS6B_ARATH (26S protease regulatory subunit 6B homolog OS=Arabidopsis thaliana GN=RPT3 PE=1 SV=1) HSP 1 Score: 278.485 bits (711), Expect = 2.542e-74 Identity = 130/226 (57.52%), Postives = 179/226 (79.20%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 YYV ILS ++++ L+P ++ +H ++V +L E D +S++ + P SY DIGG D Q QEI+EAVELPLTH ELY+ IGI PP+GV+LYG PGTGKT+LAKAVAN T+A F+RVVGSE +QKYLG+GP++VR++FR+A + +P+I+FIDE+DA+ T R+DA +G +RE+QR ++ELLNQ+DGFD +V+VI+ TNR ++LDPALLRPGR+DRKI+F P Sbjct: 101 YYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLP 326
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS6B_RAT (26S protease regulatory subunit 6B OS=Rattus norvegicus GN=Psmc4 PE=1 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 3.320e-74 Identity = 129/226 (57.08%), Postives = 180/226 (79.65%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 YYV ILS +D++ L+P ++ +H ++V +L E D + ++ ++ P YADIGG+D Q QE++EAVELPLTH ELY+ IGI PP+GV++YG PG GKT+LAKAVA+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A + +P+I+FIDEIDA+ TKR+DA +G +RE+QR +LELLNQ+DGFD +V+VI+ TNR ++LDPALLRPGR+DRKI+F P Sbjct: 111 YYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLP 336
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS6B_MACFA (26S protease regulatory subunit 6B OS=Macaca fascicularis GN=PSMC4 PE=2 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 3.320e-74 Identity = 129/226 (57.08%), Postives = 180/226 (79.65%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 YYV ILS +D++ L+P ++ +H ++V +L E D + ++ ++ P YADIGG+D Q QE++EAVELPLTH ELY+ IGI PP+GV++YG PG GKT+LAKAVA+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A + +P+I+FIDEIDA+ TKR+DA +G +RE+QR +LELLNQ+DGFD +V+VI+ TNR ++LDPALLRPGR+DRKI+F P Sbjct: 111 YYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLP 336
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS6B_HUMAN (26S protease regulatory subunit 6B OS=Homo sapiens GN=PSMC4 PE=1 SV=2) HSP 1 Score: 278.1 bits (710), Expect = 3.320e-74 Identity = 129/226 (57.08%), Postives = 180/226 (79.65%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 YYV ILS +D++ L+P ++ +H ++V +L E D + ++ ++ P YADIGG+D Q QE++EAVELPLTH ELY+ IGI PP+GV++YG PG GKT+LAKAVA+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A + +P+I+FIDEIDA+ TKR+DA +G +RE+QR +LELLNQ+DGFD +V+VI+ TNR ++LDPALLRPGR+DRKI+F P Sbjct: 111 YYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLP 336
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS6B_BOVIN (26S protease regulatory subunit 6B OS=Bos taurus GN=PSMC4 PE=2 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 3.320e-74 Identity = 129/226 (57.08%), Postives = 180/226 (79.65%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 YYV ILS +D++ L+P ++ +H ++V +L E D + ++ ++ P YADIGG+D Q QE++EAVELPLTH ELY+ IGI PP+GV++YG PG GKT+LAKAVA+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A + +P+I+FIDEIDA+ TKR+DA +G +RE+QR +LELLNQ+DGFD +V+VI+ TNR ++LDPALLRPGR+DRKI+F P Sbjct: 111 YYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLP 336 The following BLAST results are available for this feature:
BLAST of FC920739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 381
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920739 ID=FC920739; Name=FC920739; organism=Citrus clementina; type=EST; length=724bpback to top |