FC920739
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PS10A_ARATH (26S protease regulatory subunit 10B homolog A OS=Arabidopsis thaliana GN=RPT4A PE=2 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 5.875e-63 Identity = 118/226 (52.21%), Postives = 166/226 (73.45%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 Y VG S VDK++L G +++ L+++ L EVDP+V M E SY+ +GGL QI+E++E++ELPL +PEL+ +GIKPPKGV+LYG PGTGKTLLA+A+A++ A FL+VV S +I KY+G+ +L+RE+F A + P I+F+DEIDA+G +R+ + +REIQRT++ELLNQLDGFD+ G V++I+ TNR + LDPALLRPGR+DRKI+ P Sbjct: 85 YVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLP 310
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS7_DICDI (26S protease regulatory subunit 7 OS=Dictyostelium discoideum GN=psmC2 PE=1 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 5.875e-63 Identity = 108/194 (55.67%), Postives = 155/194 (79.90%), Query Frame = 2 Query: 98 LQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 L ++D V++M+VE+ P +Y D+GG QI++++E VE+PL HPE + ++GI PPKGV++YG PGTGKTL A+AVAN T A F+RV+GSEL+QKY+G+G ++VR+LF++A I+F DE+DA+G R+D +GG+ E+QRTMLEL+NQLDGFD RG+++V++ TNR ++LDPALLRPGR+DRK++F P Sbjct: 148 LPPKIDASVTMMQVEEKPDITYKDVGGCKEQIEKLREVVEMPLLHPEKFVNLGIDPPKGVLMYGPPGTGKTLCARAVANRTDAAFVRVIGSELVQKYVGEGARMVRDLFQMARSKKACIIFFDEVDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 341
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PSMR1_HALSA (Proteasome-activating nucleotidase 1 OS=Halobacterium salinarium GN=pan1 PE=3 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 7.673e-63 Identity = 113/218 (51.83%), Postives = 164/218 (75.23%), Query Frame = 2 Query: 35 DQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFPISD 688 D LE G + + N SV +L DE D M+V+++P +YADIGGLD Q++E++EAVE PL +PE ++ +G++PP GV+L+G PGTGKT+LAKAVAN T A+F+++ GSEL++K++G+G +LVR+LF +A+ P+I+FIDEIDAV KR D+ + G+ E+QRTM++LL+++DGFD RGD+++I TNR + LD A+LRPGR DR I+ P D Sbjct: 110 DTLEVGDRVAI-NDSFSVQRVLDDETDARAQAMEVDESPSVTYADIGGLDDQLREVREAVEDPLVNPEKFDAVGVEPPSGVLLHGPPGTGKTMLAKAVANQTDASFIKMAGSELVRKFIGEGSRLVRDLFELAEQKDPAIIFIDEIDAVAAKRTDSKTSGDAEVQRTMMQLLSEMDGFDERGDIRIIAATNRFDMLDSAILRPGRFDRLIEVPNPNPD 326
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PS10B_ARATH (26S protease regulatory subunit S10B homolog B OS=Arabidopsis thaliana GN=RPT4B PE=2 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 7.673e-63 Identity = 118/226 (52.21%), Postives = 165/226 (73.01%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 Y VG S VDK++L G +++ L+++ L EVDP+V M E SY+ +GGL QI+E++E++ELPL +PEL+ +GIKPPKGV+LYG PGTGKTLLA+A+A++ A FL+VV S +I KY+G+ +L+RE+F A + P I+F+DEIDA+G +R+ + +REIQRT++ELLNQLDGFD G V++I+ TNR + LDPALLRPGR+DRKI+ P Sbjct: 85 YVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLP 310
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS6A_SCHPO (26S protease regulatory subunit 6A OS=Schizosaccharomyces pombe GN=tbp1 PE=2 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 7.673e-63 Identity = 111/225 (49.33%), Postives = 164/225 (72.89%), Query Frame = 2 Query: 5 YVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 ++ ++ V+ ++L PG I ++ ++ L E D V M+V++ P E Y+DIGGL QI+E+ EA+ LP+ + + +G+KPPKG +++G PGTGKTLLA+A A ++ATFL++ +L+Q ++GDG KLVR+ F +A + SP+I+FIDE+DA+GTKR+D+ G+RE+QRTMLELLNQLDGF S V+VI TNR+++LDPALLR GR+DRK++F P Sbjct: 132 FLPLIGLVEPEELHPGDLIGVNKDSYLIIDKLPSEYDSRVKAMEVDEKPTERYSDIGGLSKQIEELFEAIVLPMQQADKFRKLGVKPPKGCLMFGPPGTGKTLLARACAAQSNATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSDDRVKVIAATNRVDTLDPALLRSGRLDRKLEFPLP 356
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS10_CAEEL (Probable 26S protease regulatory subunit S10B OS=Caenorhabditis elegans GN=rpt-4 PE=1 SV=2) HSP 1 Score: 239.195 bits (609), Expect = 1.709e-62 Identity = 116/226 (51.33%), Postives = 163/226 (72.12%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 Y VG ++K++L+ G + + L+++ L EVDP+V M E SY+D+GGL QI+E++E VELPL +PEL++ +GI PPKG +L+G PGTGKTLLA+AVA+ FL+VV S ++ KY+G+ +++RE+F A D P IVF+DEIDA+G +R+ + +REIQRT++ELLNQLDGFDS G V+VI+ TNR ++LDPALLRPGR+DRKI+ P Sbjct: 96 YVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLP 321
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS10_SPETR (26S protease regulatory subunit S10B OS=Spermophilus tridecemlineatus GN=PSMC6 PE=2 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 2.916e-62 Identity = 115/226 (50.88%), Postives = 162/226 (71.68%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 Y VG +DK +L+PG + + L+++ L EVDP+V M E SY++IGGL QI+E++E +ELPLT+PEL++ +GI PPKG +LYG PGTGKTLLA+AVA+ FL+VV S ++ KY+G+ +L+RE+F A D P I+F+DEIDA+G +R+ + +REIQRT++ELLNQ+DGFD+ V++I+ TNR ++LDPALLRPGR+DRKI P Sbjct: 79 YVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLP 304
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS10_MOUSE (26S protease regulatory subunit S10B OS=Mus musculus GN=Psmc6 PE=1 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 2.916e-62 Identity = 115/226 (50.88%), Postives = 162/226 (71.68%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 Y VG +DK +L+PG + + L+++ L EVDP+V M E SY++IGGL QI+E++E +ELPLT+PEL++ +GI PPKG +LYG PGTGKTLLA+AVA+ FL+VV S ++ KY+G+ +L+RE+F A D P I+F+DEIDA+G +R+ + +REIQRT++ELLNQ+DGFD+ V++I+ TNR ++LDPALLRPGR+DRKI P Sbjct: 79 YVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLP 304
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS10_HUMAN (26S protease regulatory subunit S10B OS=Homo sapiens GN=PSMC6 PE=1 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 2.916e-62 Identity = 115/226 (50.88%), Postives = 162/226 (71.68%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 Y VG +DK +L+PG + + L+++ L EVDP+V M E SY++IGGL QI+E++E +ELPLT+PEL++ +GI PPKG +LYG PGTGKTLLA+AVA+ FL+VV S ++ KY+G+ +L+RE+F A D P I+F+DEIDA+G +R+ + +REIQRT++ELLNQ+DGFD+ V++I+ TNR ++LDPALLRPGR+DRKI P Sbjct: 79 YVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLP 304
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS10_BOVIN (26S protease regulatory subunit S10B OS=Bos taurus GN=PSMC6 PE=2 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 2.916e-62 Identity = 115/226 (50.88%), Postives = 162/226 (71.68%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 Y VG +DK +L+PG + + L+++ L EVDP+V M E SY++IGGL QI+E++E +ELPLT+PEL++ +GI PPKG +LYG PGTGKTLLA+AVA+ FL+VV S ++ KY+G+ +L+RE+F A D P I+F+DEIDA+G +R+ + +REIQRT++ELLNQ+DGFD+ V++I+ TNR ++LDPALLRPGR+DRKI P Sbjct: 79 YVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLP 304 The following BLAST results are available for this feature:
BLAST of FC920739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 381
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920739 ID=FC920739; Name=FC920739; organism=Citrus clementina; type=EST; length=724bpback to top |