FC920739

Overview
NameFC920739
Unique NameFC920739
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: CDC48_SOYBN (Cell division cycle protein 48 homolog OS=Glycine max GN=CDC48 PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.705e-41
Identity = 86/173 (49.71%), Postives = 116/173 (67.05%), Query Frame = 2
Query:  161 YADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679
            Y D+GG+  Q+ +I+E VELPL HP+L++ IG+KPPKG++LYG PG+GKTL+A+AVAN T A F  + G E++ K  G+    +R+ F  A+  +PSI+FIDEID++  KR   H   ER   R + +LL  +DG  SR  V VI  TNR  S+DPAL R GR DR+ID   P
Sbjct:  207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVER---RIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVP 376          

HSP 2 Score: 153.68 bits (387), Expect = 9.445e-37
Identity = 79/191 (41.36%), Postives = 118/191 (61.78%), Query Frame = 2
Query:  137 VEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFPISD*ETYFQI 709
            V + P  S+ DIGGL+   +E++E V+ P+ HPE +E  G+ P KGV+ YG PG GKTLLAKA+AN   A F+ V G EL+  + G+    VRE+F  A   +P ++F DE+D++ T+R  +         R + +LL ++DG  ++  V +I  TNR + +DPALLRPGR+D+ I    P+ D ++  QI
Sbjct:  472 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLI--YIPLPDEDSRHQI 660          
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: CDC48_CAPAN (Cell division cycle protein 48 homolog OS=Capsicum annuum GN=CAFP PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 8.255e-41
Identity = 85/173 (49.13%), Postives = 116/173 (67.05%), Query Frame = 2
Query:  161 YADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679
            Y D+GG+  Q+ +I+E VELPL HP+L++ IG+KPPKG++LYG PG+GKTL+A+AVAN T A F  + G E++ K  G+    +R+ F  A+  +PSI+FIDEID++  KR   H   ER   R + +LL  +DG  SR  V V+  TNR  S+DPAL R GR DR+ID   P
Sbjct:  207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVER---RIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVP 376          

HSP 2 Score: 150.984 bits (380), Expect = 6.122e-36
Identity = 78/191 (40.84%), Postives = 118/191 (61.78%), Query Frame = 2
Query:  137 VEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFPISD*ETYFQI 709
            V + P  S+ DIGGL+   +E++E V+ P+  PE +E  G+ P KGV+ YG PG GKTLLAKA+AN   A F+ V G EL+  + G+    VRE+F  A   +P ++F DE+D++ T+R  +         R + +LL ++DG +++  V +I  TNR + +DPALLRPGR+D+ I    P+ D ++  QI
Sbjct:  472 VVEVPNVSWEDIGGLENVKRELQETVQYPVEPPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSSGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLI--YIPLPDEDSRHQI 660          
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: CD48D_ARATH (Cell division control protein 48 homolog D OS=Arabidopsis thaliana GN=CDC48D PE=1 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 8.255e-41
Identity = 85/173 (49.13%), Postives = 116/173 (67.05%), Query Frame = 2
Query:  161 YADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679
            Y D+GG+  Q+ +I+E VELPL HP+L++ IG+KPPKG++LYG PG+GKTL+A+AVAN T A F  + G E++ K  G+    +R+ F  A+  +PSI+FIDEID++  KR   H   ER   R + +LL  +DG  SR  V V+  TNR  S+DPAL R GR DR+ID   P
Sbjct:  207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVER---RIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVP 376          

HSP 2 Score: 156.762 bits (395), Expect = 1.116e-37
Identity = 79/191 (41.36%), Postives = 121/191 (63.35%), Query Frame = 2
Query:  137 VEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFPISD*ETYFQI 709
            V + P  S+ DIGGL+   +E++E V+ P+ HPE +E  G+ P KGV+ YG PG GKTLLAKA+AN   A F+ + G EL+  + G+    VRE+F  A   +P ++F DE+D++ T+R ++         R + +LL ++DG +++  V +I  TNR + +DPALLRPGR+D+ I    P+ D E+ +QI
Sbjct:  472 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLI--YIPLPDEESRYQI 660          
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: TERA_DANRE (Transitional endoplasmic reticulum ATPase OS=Danio rerio GN=vcp PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.078e-40
Identity = 84/173 (48.55%), Postives = 114/173 (65.90%), Query Frame = 2
Query:  161 YADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679
            Y DIGG+  Q+ +IKE VELPL HP L++ IG+KPP+G++LYG PGTGKTL+A+AVAN T A F  + G E++ K  G+    +R+ F  A+  +P+I+FIDE+DA+  KR   H   ER   R + +LL  +DG   R  V V+  TNR  S+DPAL R GR DR++D   P
Sbjct:  203 YDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVER---RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIP 372          

HSP 2 Score: 144.821 bits (364), Expect = 4.387e-34
Identity = 72/181 (39.78%), Postives = 110/181 (60.77%), Query Frame = 2
Query:  137 VEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679
            V + P  ++ DIGGLD   +E++E V+ P+ HP+ +   G+ P KGV+ YG PG GKTLLAKA+AN   A F+ + G EL+  + G+    VRE+F  A   +P ++F DE+D++   R      G     R + ++L ++DG  S+ +V +I  TNR + +DPA+LRPGR+D+ I    P
Sbjct:  468 VVEVPNITWEDIGGLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRVINQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLP 648          
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: TERA_XENTR (Transitional endoplasmic reticulum ATPase OS=Xenopus tropicalis GN=vcp PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.408e-40
Identity = 85/175 (48.57%), Postives = 114/175 (65.14%), Query Frame = 2
Query:  161 YADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFPIS 685
            Y DIGG   Q+ +IKE VELPL HP L++ IG+KPP+G++LYG PGTGKTL+A+AVAN T A F  + G E++ K  G+    +R+ F  A+  +P+I+FIDE+DA+  KR   H   ER   R + +LL  +DG   R  V V+  TNR  S+DPAL R GR DR++D   P S
Sbjct:  203 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVER---RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDS 374          

HSP 2 Score: 142.895 bits (359), Expect = 1.667e-33
Identity = 70/181 (38.67%), Postives = 110/181 (60.77%), Query Frame = 2
Query:  137 VEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679
            V + P  ++ DIGGL+   +E++E V+ P+ HP+ +   G+ P KGV+ YG PG GKTLLAKA+AN   A F+ + G EL+  + G+    VRE+F  A   +P ++F DE+D++   R      G     R + ++L ++DG  ++ +V +I  TNR + +DPA+LRPGR+D+ I    P
Sbjct:  468 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLP 648          
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: TERA_XENLA (Transitional endoplasmic reticulum ATPase OS=Xenopus laevis GN=vcp PE=1 SV=3)

HSP 1 Score: 166.392 bits (420), Expect = 1.408e-40
Identity = 85/175 (48.57%), Postives = 114/175 (65.14%), Query Frame = 2
Query:  161 YADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFPIS 685
            Y DIGG   Q+ +IKE VELPL HP L++ IG+KPP+G++LYG PGTGKTL+A+AVAN T A F  + G E++ K  G+    +R+ F  A+  +P+I+FIDE+DA+  KR   H   ER   R + +LL  +DG   R  V V+  TNR  S+DPAL R GR DR++D   P S
Sbjct:  203 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVER---RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDS 374          

HSP 2 Score: 141.739 bits (356), Expect = 3.714e-33
Identity = 70/181 (38.67%), Postives = 109/181 (60.22%), Query Frame = 2
Query:  137 VEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679
            V + P  ++ DIGGL+   +E++E V+ P+ HP+ +   G+ P KGV+ YG PG GKTLLAKA+AN   A F+ + G EL+  + G+    VRE+F  A   +P ++F DE+D++   R      G     R + ++L ++DG   + +V +I  TNR + +DPA+LRPGR+D+ I    P
Sbjct:  468 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLP 648          
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: TERA_RAT (Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus GN=Vcp PE=1 SV=3)

HSP 1 Score: 166.007 bits (419), Expect = 1.839e-40
Identity = 84/173 (48.55%), Postives = 113/173 (65.32%), Query Frame = 2
Query:  161 YADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679
            Y DIGG   Q+ +IKE VELPL HP L++ IG+KPP+G++LYG PGTGKTL+A+AVAN T A F  + G E++ K  G+    +R+ F  A+  +P+I+FIDE+DA+  KR   H   ER   R + +LL  +DG   R  V V+  TNR  S+DPAL R GR DR++D   P
Sbjct:  203 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVER---RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIP 372          

HSP 2 Score: 142.895 bits (359), Expect = 1.667e-33
Identity = 70/181 (38.67%), Postives = 110/181 (60.77%), Query Frame = 2
Query:  137 VEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679
            V + P  ++ DIGGL+   +E++E V+ P+ HP+ +   G+ P KGV+ YG PG GKTLLAKA+AN   A F+ + G EL+  + G+    VRE+F  A   +P ++F DE+D++   R      G     R + ++L ++DG  ++ +V +I  TNR + +DPA+LRPGR+D+ I    P
Sbjct:  468 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLP 648          
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: TERA_PIG (Transitional endoplasmic reticulum ATPase OS=Sus scrofa GN=VCP PE=1 SV=5)

HSP 1 Score: 166.007 bits (419), Expect = 1.839e-40
Identity = 84/173 (48.55%), Postives = 113/173 (65.32%), Query Frame = 2
Query:  161 YADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679
            Y DIGG   Q+ +IKE VELPL HP L++ IG+KPP+G++LYG PGTGKTL+A+AVAN T A F  + G E++ K  G+    +R+ F  A+  +P+I+FIDE+DA+  KR   H   ER   R + +LL  +DG   R  V V+  TNR  S+DPAL R GR DR++D   P
Sbjct:  203 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVER---RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIP 372          

HSP 2 Score: 141.739 bits (356), Expect = 3.714e-33
Identity = 69/181 (38.12%), Postives = 110/181 (60.77%), Query Frame = 2
Query:  137 VEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679
            V + P  ++ DIGGL+   +E+++ V+ P+ HP+ +   G+ P KGV+ YG PG GKTLLAKA+AN   A F+ + G EL+  + G+    VRE+F  A   +P ++F DE+D++   R      G     R + ++L ++DG  ++ +V +I  TNR + +DPA+LRPGR+D+ I    P
Sbjct:  468 VVEVPQVTWEDIGGLEDVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLP 648          
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: TERA_MOUSE (Transitional endoplasmic reticulum ATPase OS=Mus musculus GN=Vcp PE=1 SV=4)

HSP 1 Score: 166.007 bits (419), Expect = 1.839e-40
Identity = 84/173 (48.55%), Postives = 113/173 (65.32%), Query Frame = 2
Query:  161 YADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679
            Y DIGG   Q+ +IKE VELPL HP L++ IG+KPP+G++LYG PGTGKTL+A+AVAN T A F  + G E++ K  G+    +R+ F  A+  +P+I+FIDE+DA+  KR   H   ER   R + +LL  +DG   R  V V+  TNR  S+DPAL R GR DR++D   P
Sbjct:  203 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVER---RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIP 372          

HSP 2 Score: 142.895 bits (359), Expect = 1.667e-33
Identity = 70/181 (38.67%), Postives = 110/181 (60.77%), Query Frame = 2
Query:  137 VEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679
            V + P  ++ DIGGL+   +E++E V+ P+ HP+ +   G+ P KGV+ YG PG GKTLLAKA+AN   A F+ + G EL+  + G+    VRE+F  A   +P ++F DE+D++   R      G     R + ++L ++DG  ++ +V +I  TNR + +DPA+LRPGR+D+ I    P
Sbjct:  468 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLP 648          
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: TERA_HUMAN (Transitional endoplasmic reticulum ATPase OS=Homo sapiens GN=VCP PE=1 SV=4)

HSP 1 Score: 166.007 bits (419), Expect = 1.839e-40
Identity = 84/173 (48.55%), Postives = 113/173 (65.32%), Query Frame = 2
Query:  161 YADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679
            Y DIGG   Q+ +IKE VELPL HP L++ IG+KPP+G++LYG PGTGKTL+A+AVAN T A F  + G E++ K  G+    +R+ F  A+  +P+I+FIDE+DA+  KR   H   ER   R + +LL  +DG   R  V V+  TNR  S+DPAL R GR DR++D   P
Sbjct:  203 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVER---RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIP 372          

HSP 2 Score: 142.895 bits (359), Expect = 1.667e-33
Identity = 70/181 (38.67%), Postives = 110/181 (60.77%), Query Frame = 2
Query:  137 VEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679
            V + P  ++ DIGGL+   +E++E V+ P+ HP+ +   G+ P KGV+ YG PG GKTLLAKA+AN   A F+ + G EL+  + G+    VRE+F  A   +P ++F DE+D++   R      G     R + ++L ++DG  ++ +V +I  TNR + +DPA+LRPGR+D+ I    P
Sbjct:  468 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLP 648          
The following BLAST results are available for this feature:
BLAST of FC920739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 381
Match NameE-valueIdentityDescription
CDC48_SOYBN3.705e-4149.71Cell division cycle protein 48 homolog OS=Glycine ... [more]
CDC48_CAPAN8.255e-4149.13Cell division cycle protein 48 homolog OS=Capsicum... [more]
CD48D_ARATH8.255e-4149.13Cell division control protein 48 homolog D OS=Arab... [more]
TERA_DANRE1.078e-4048.55Transitional endoplasmic reticulum ATPase OS=Danio... [more]
TERA_XENTR1.408e-4048.57Transitional endoplasmic reticulum ATPase OS=Xenop... [more]
TERA_XENLA1.408e-4048.57Transitional endoplasmic reticulum ATPase OS=Xenop... [more]
TERA_RAT1.839e-4048.55Transitional endoplasmic reticulum ATPase OS=Rattu... [more]
TERA_PIG1.839e-4048.55Transitional endoplasmic reticulum ATPase OS=Sus s... [more]
TERA_MOUSE1.839e-4048.55Transitional endoplasmic reticulum ATPase OS=Mus m... [more]
TERA_HUMAN1.839e-4048.55Transitional endoplasmic reticulum ATPase OS=Homo ... [more]

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Properties
Property NameValue
Genbank descriptionC32012D12EF RVDevelop1 Citrus clementina cDNA clone C32012D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920739 ID=FC920739; Name=FC920739; organism=Citrus clementina; type=EST; length=724bp
GTATTACGTCGGGATCTTGTCCTTTGTTGATAAGGATCAGCTGGAGCCTG
GCTGTGCTATTTTGATGCACAATAAGCTTCTTTCGGTCGTTGGGCTTCTG
CAAGATGAAGTAGATCCAATGGTGTCTGTGATGAAGGTTGAGAAGGCTCC
ATTGGAGTCTTATGCTGATATTGGAGGTTTAGATGCACAGATACAGGAGA
TTAAAGAAGCTGTTGAGCTTCCTCTTACCCATCCTGAACTTTATGAAGAT
ATCGGTATCAAGCCTCCTAAGGGAGTTATATTGTATGGAGAGCCTGGAAC
AGGCAAGACACTGCTTGCAAAGGCTGTGGCAAATTCAACATCTGCAACTT
TCTTGCGTGTTGTCGGTAGTGAATTAATTCAGAAGTACTTGGGTGATGGA
CCAAAATTAGTAAGGGAACTTTTCAGAGTTGCTGATGATCTGTCACCTTC
TATCGTCTTCATTGATGAAATTGATGCAGTTGGTACGAAGAGGTATGATG
CCCACTCAGGTGGCGAACGTGAAATTCAGAGAACCATGTTGGAGTTGCTG
AACCAGTTGGATGGGTTTGATTCTAGAGGAGATGTNCAAGTAATTCTTGG
CACCAACCGAATTGAAAGCCTGGATCCAGCTTTACTTCGGCCAGGTCGAA
TAGATAGAAAGATTGATTTCCTCTTCCCGATATCAGACTAGGAGACGTAT
TTCCAGATTCCACATCAGGATGAC
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