FC920739
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS6B_SCHPO (26S protease regulatory subunit 6B homolog OS=Schizosaccharomyces pombe GN=rpt3 PE=2 SV=1) HSP 1 Score: 274.248 bits (700), Expect = 4.795e-73 Identity = 127/223 (56.95%), Postives = 178/223 (79.82%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDF 670 Y V ILS +D++ L+P ++ + ++V +L E D +S+++ ++ P SYAD+GGLD Q QE++EAVELPLT +LY IGI PP+GV+LYG PGTGKT+L KAVANST+A F+RVVGSE +QKYLG+GP++VR++FR+A + +P+I+FIDEIDA+ TKR+DA +G +RE+QR ++ELL Q+DGFD +V+VI+ TNR ++LDPALLRPGR+DRKI+F Sbjct: 80 YVVRILSTLDRELLKPSASVALQRHSNALVDILPPEADSSISMLRPDERPDVSYADVGGLDVQKQEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTAANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENAPAIIFIDEIDAIATKRFDAQTGADREVQRILIELLTQMDGFDQGANVKVIMATNRADTLDPALLRPGRLDRKIEF 302
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS6B_ASPNG (26S protease regulatory subunit 6B homolog OS=Aspergillus niger GN=tbpA PE=3 SV=1) HSP 1 Score: 273.863 bits (699), Expect = 6.262e-73 Identity = 128/223 (57.40%), Postives = 180/223 (80.72%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDF 670 Y V ILS +D+++L+P ++ +H ++V +L E D ++++ + P +YAD+GGLD Q QEI+EAVELPLT +LY+ IGI PP+GV+LYG PGTGKT+L KAVANST+A+F+RV GSE +QKYLG+GP++VR++FR+A + SP+I+FIDEIDA+ TKR+DA +G +RE+QR +LELLNQ+DGF+ +V+VI+ TNR ++LDPALLRPGR+DRKI+F Sbjct: 112 YVVRILSTLDREKLKPSSSVALHRHSNALVDILPPEADSSIAMLGENEKPDVTYADVGGLDMQKQEIREAVELPLTQFDLYKQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRVNGSEFVQKYLGEGPRMVRDVFRMARENSPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFEQSSNVKVIMATNRADTLDPALLRPGRLDRKIEF 334
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS6B_MOUSE (26S protease regulatory subunit 6B OS=Mus musculus GN=Psmc4 PE=1 SV=1) HSP 1 Score: 273.478 bits (698), Expect = 8.179e-73 Identity = 126/226 (55.75%), Postives = 179/226 (79.20%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 YYV ++S +D++ L+P ++ +H ++V +L D + ++ ++ P YADIGG+D Q QE++EAVELPLTH ELY+ IGI PP+GV++YG PG GKT+LAKAVA+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A + +P+I+FIDEIDA+ TKR+DA +G +RE+QR +LELLNQ+DGFD +V+VI+ TNR ++LDPALLRPGR+DRKI+F P Sbjct: 111 YYVRMVSTIDRELLKPNASVALHKHSNALVDVLPPAADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLP 336
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS6B_ENCCU (26S protease regulatory subunit 6B homolog OS=Encephalitozoon cuniculi GN=ECU08_1970 PE=1 SV=1) HSP 1 Score: 273.092 bits (697), Expect = 1.068e-72 Identity = 128/226 (56.64%), Postives = 173/226 (76.55%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 + V ILS VD++ L+P + +H ++VG+L EVD + VM + P +Y D+GGLD Q QEIKE VELPL +LY IGI PP+GV+LYG PGTGKT+L KAVAN T ATF+RV GSE +QKYLG+GP++VR++FR+A + +PSIVFIDE+D++ TKR+DA + +RE+QR ++ELLNQ+DGFD +V+VI+ TNR +++DPALLRPGR+DRKI+F P Sbjct: 80 FVVRILSTVDRELLKPNTTVALHRHSSAIVGVLPPEVDSTIPVMGESEKPSVTYGDVGGLDVQKQEIKETVELPLLQSDLYRQIGIDPPQGVLLYGPPGTGKTMLVKAVANHTKATFIRVNGSEFVQKYLGEGPRMVRDVFRLAREKAPSIVFIDEVDSIATKRFDASTSADREVQRVLIELLNQMDGFDPAANVKVIMATNRADTIDPALLRPGRLDRKIEFPLP 305
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PSMR_ARCFU (Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus GN=pan PE=1 SV=1) HSP 1 Score: 272.322 bits (695), Expect = 1.822e-72 Identity = 128/226 (56.64%), Postives = 178/226 (78.76%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 + V ++++++L+PG + ++ + L++V +L DPMV +VE+ P SY DIGGLD QI+EI+EAVELPL PEL+ ++GI+PPKGV+LYG PGTGKTLLAKAVAN T ATF+RVVGSE +QKY+G+G +LVRE+F++A + +PSI+FIDE+DA+ +R ++ + G+RE+QRTM++LL +LDGFD RGDV+VI TNRI+ LDPA+LRPGR DR I+ P Sbjct: 87 FVVNTSQYINEEELKPGARVALNQQTLAIVNVLPTSKDPMVYGFEVEEKPEVSYEDIGGLDVQIEEIREAVELPLLKPELFAEVGIEPPKGVLLYGPPGTGKTLLAKAVANQTRATFIRVVGSEFVQKYIGEGARLVREVFQLAKEKAPSIIFIDELDAIAARRTNSDTSGDREVQRTMMQLLAELDGFDPRGDVKVIGATNRIDILDPAILRPGRFDRIIEVPLP 312
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS6B_DICDI (26S protease regulatory subunit 6B homolog OS=Dictyostelium discoideum GN=psmC4 PE=1 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 3.108e-72 Identity = 130/224 (58.04%), Postives = 177/224 (79.02%), Query Frame = 2 Query: 8 VGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 V ILS +D++ L+P ++ + ++V L E D + ++ ++ P ESY+DIGG D Q QE++EAVELPLTH LY+ IGI PP+GV+LYG PGTGKT+LAKAVA+ TSA F+RVVGSE +QKYLG+GP+LVR++FR+A + SP+I+FIDEIDA+ TKR+DA +G +RE+QR ++ELLNQ+DGFD +V+VI+ TNR ++LDPALLRPGR+DRKI+F P Sbjct: 98 VRILSTIDRELLKPSASVALQRHSNALVDTLPPESDSSIHLLGADEKPSESYSDIGGGDIQKQEMREAVELPLTHHNLYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTSAAFIRVVGSEFVQKYLGEGPRLVRDVFRLARENSPAIIFIDEIDAIATKRFDAQTGADREVQRILMELLNQMDGFDVSVNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLP 321
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS6B_SOLTU (26S protease regulatory subunit 6B homolog OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 270.781 bits (691), Expect = 5.301e-72 Identity = 127/226 (56.19%), Postives = 178/226 (78.76%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 YYV ILS ++++ L+P ++ + ++V +L E D +S++ + P +Y DIGG D Q QEI+EAVELPLTH ELY+ IGI PP+GV+LYG PGTGKT+LAKAVA+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A + +P+I+FIDE+DA+ T R+DA +G +RE+QR ++ELLNQ+DGFD +V+VI+ TNR ++LDPALLRPGR+DRKI+F P Sbjct: 106 YYVRILSTINRELLKPSASVGLDRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLP 331
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS6B_YEAST (26S protease regulatory subunit 6B homolog OS=Saccharomyces cerevisiae GN=RPT3 PE=1 SV=1) HSP 1 Score: 268.47 bits (685), Expect = 2.631e-71 Identity = 126/223 (56.50%), Postives = 174/223 (78.03%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDF 670 Y V ILS +D++ L+P ++ +H ++V +L + D +SVM + P +YAD+GGLD Q QEI+EAVELPL +LYE IGI PP+GV+LYG PGTGKT+L KAVANST A F+RV GSE + KYLG+GP++VR++FR+A + +PSI+FIDE+D++ TKR+DA +G +RE+QR ++ELL Q+DGFD +V+VI+ TNR ++LDPALLRPGR+DRKI+F Sbjct: 118 YVVRILSTLDRELLKPSMSVALHRHSNALVDILPPDSDSSISVMGENEKPDVTYADVGGLDMQKQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLARENAPSIIFIDEVDSIATKRFDAQTGSDREVQRILIELLTQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEF 340
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PSMR_PYRKO (Proteasome-activating nucleotidase OS=Pyrococcus kodakaraensis GN=pan PE=3 SV=1) HSP 1 Score: 266.159 bits (679), Expect = 1.306e-70 Identity = 124/226 (54.87%), Postives = 175/226 (77.43%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 + V I ++++D+L+PG + + + +++V LL E DP V +V + P +Y DIGGL+ Q+QE++EA+ELPL HPEL+E +GI+PPKGV+LYG PG GKTL+AKAVAN +ATF+RVVGSEL++K++G+G +LV ELF +A + +P+I+FIDEIDA+G KR D +GGERE+ RT+++LL ++DGFD RG+V+VI TNR + LDPALLRPGR DR I+ P Sbjct: 84 FVVRIAPWIERDKLKPGARVALDQRTMAIVELLPSEKDPSVLGFEVIERPKVTYNDIGGLEKQLQELREAIELPLKHPELFEQVGIEPPKGVLLYGPPGCGKTLMAKAVANHVNATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLP 309
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS8_NAEFO (26S protease regulatory subunit 8 homolog OS=Naegleria fowleri PE=2 SV=1) HSP 1 Score: 265.003 bits (676), Expect = 2.909e-70 Identity = 129/227 (56.83%), Postives = 175/227 (77.09%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYD-AHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 Y V I ++ L PG + + N ++ +L +++DP+VS+MKVEK P +Y +GGLD QI+EIKE +ELP+ HPEL+E +GI PKGVI+YG PGTGKTLLA+AVA+ T TF+RV GSEL+QKY+G+G K+VRELF +A + +PSI+F+DEID++G+ R + GG+ E+QRTMLELLNQLDGF+S ++++I+ TNRI+ LDPALLRPGRIDRKI+F P Sbjct: 102 YIVDIDKSIELKDLTPGVRVALRNDSYALHKILPNKIDPLVSLMKVEKVPDATYEMVGGLDEQIKEIKEVIELPIKHPELFESLGIAQPKGVIMYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSKMVRELFVMAREHAPSIIFMDEIDSIGSTRTEGGKGGGDSEVQRTMLELLNQLDGFESTQNIKIIMATNRIDILDPALLRPGRIDRKIEFPNP 328 The following BLAST results are available for this feature:
BLAST of FC920739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 381
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920739 ID=FC920739; Name=FC920739; organism=Citrus clementina; type=EST; length=724bpback to top |