FC920739
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: TBP6_YEAST (Probable 26S protease subunit YTA6 OS=Saccharomyces cerevisiae GN=YTA6 PE=1 SV=2) HSP 1 Score: 117.472 bits (293), Expect = 7.501e-26 Identity = 74/188 (39.36%), Postives = 108/188 (57.45%), Query Frame = 2 Query: 161 YADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGD---------VQVILGTNRIESLDPALLRPGRIDRKIDFLFPISD*ET 697 + DI GL +KEAV P P+L++ + +P +G++L+G PGTGKT++AKAVA +++TF V S L+ KYLG+ KLVR LF +A LSPSI+FIDEID++ T R D + R I+ +L + L ++ + V V+ TN ++D A R R RK+ P+ D ET Sbjct: 470 WEDIAGLRNAKNSLKEAVVYPFLRPDLFKGLR-EPVRGMLLFGPPGTGKTMIAKAVATESNSTFFSVSASSLLSKYLGESEKLVRALFYMAKKLSPSIIFIDEIDSMLTARSDNENESSRRIKTELLIQWSSLSSATAQSEDRNNTLDSRVLVLGATNLPWAIDDAARR--RFSRKL--YIPLPDYET 652
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PEX1_YEAST (Peroxisomal ATPase PEX1 OS=Saccharomyces cerevisiae GN=PEX1 PE=1 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 9.796e-26 Identity = 62/178 (34.83%), Postives = 99/178 (55.62%), Query Frame = 2 Query: 131 MKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKI 664 +K+ K + DIG L + E +E P + ++ + ++ G++LYG PG GKTLLA AVA F+ V G E++ K++G + +RELF A + P I+F DE D++ KR +G R + +LL Q+DG + V ++ T+R + +D ALLRPGR+D+ + Sbjct: 686 VKLTKETNIKWGDIGALANAKDVLLETLEWPTKYEPIFVNCPLRLRSGILLYGYPGCGKTLLASAVAQQCGLNFISVKGPEILNKFIGASEQNIRELFERAQSVKPCILFFDEFDSIAPKRGHDSTG---VTDRVVNQLLTQMDGAEGLDGVYILAATSRPDLIDSALLRPGRLDKSV 860
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: FIGL1_HUMAN (Fidgetin-like protein 1 OS=Homo sapiens GN=FIGNL1 PE=1 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 1.671e-25 Identity = 65/170 (38.24%), Postives = 100/170 (58.82%), Query Frame = 2 Query: 137 VEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDG--FDSRGDVQVILGTNRIESLDPALLR 640 ++ P ++ DI G++ IKE V P+ P+++ + PPKG++L+G PGTGKTL+ K +A+ + ATF + S L K++G+G K+VR LF VA P+++FIDEID++ ++R D R I+ E L QLDG S + V+ TNR + +D A R Sbjct: 392 MDHGPPVNWEDIAGVEFAKATIKEIVVWPMLRPDIFTGLR-GPPKGILLFGPPGTGKTLIGKCIASQSGATFFSISASSLTSKWVGEGEKMVRALFAVARCQQPAVIFIDEIDSLLSQRGDGEHESSRRIK---TEFLVQLDGATTSSEDRILVVGATNRPQEIDEAARR 557
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: SPA5L_XENTR (Spermatogenesis-associated protein 5-like protein 1 OS=Xenopus tropicalis GN=spata5l1 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.182e-25 Identity = 64/180 (35.56%), Postives = 104/180 (57.78%), Query Frame = 2 Query: 134 KVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLS---PSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKI 664 K+++AP + +D +KE + +PL +PE +G+ PKGV+L G PG GKTLL KAVA A + + G + G+ + +R++F A + + P+++FIDE+DA+ KR ++S E R + +LL +DG DS + + T+R +++DPAL RPGR DR++ Sbjct: 184 KLQEAP---QLKVAAMDDTCASLKEIIHMPLHYPETMHKLGLPCPKGVLLIGPPGVGKTLLVKAVAREVGAYVIGLSGPAIHGSRPGESEENLRKIFEKAREAACSGPALLFIDEVDALCPKRGHSNSAPE---NRVVAQLLTLMDGIDSDNKMVTVAATSRPDAIDPALRRPGRFDREV 357 HSP 2 Score: 80.1073 bits (196), Expect = 1.327e-14 Identity = 38/105 (36.19%), Postives = 63/105 (60.00%), Query Frame = 2 Query: 125 SVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADD 439 S+ +VE P+ + IGGL+ ++++++E P+ +PE + +G+ PPKGV+LYG PG KT L KAVA S +F + ++L Y+GD K + ++ D Sbjct: 445 SIGRVEFKPVH-WEHIGGLEDIKHKLRQSIEWPMKYPEAFSRMGLTPPKGVLLYGPPGCAKTTLVKAVATSCHCSFFSISAADLFSPYVGDSEKTLAQVSNRCSD 548
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: KTNA1_STRPU (Katanin p60 ATPase-containing subunit OS=Strongylocentrotus purpuratus GN=KATNA1 PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.182e-25 Identity = 79/192 (41.15%), Postives = 110/192 (57.29%), Query Frame = 2 Query: 137 VEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREI-QRTMLELLNQLDGF-------DSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFPISD 688 V++ P +ADI GL + ++EAV LPL P+ ++ I +P KGV++ G PGTGKT+LAKAVA TF V + L KY G+ KLVR LF +A +PS +FIDEID++ +KR +G E E +R ELL Q+DG +S V V+ TN +D AL R R++++I P D Sbjct: 225 VQRNPNVHWADIAGLTEAKRLLEEAVVLPLWMPDYFKGIR-RPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSASLTSKYHGESEKLVRLLFEMARFYAPSTIFIDEIDSICSKR---GTGSEHEASRRVKSELLIQMDGVSGPSAGEESSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPEID 410
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: SPA5L_BOVIN (Spermatogenesis-associated protein 5-like protein 1 OS=Bos taurus GN=SPATA5L1 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.850e-25 Identity = 64/168 (38.10%), Postives = 97/168 (57.74%), Query Frame = 2 Query: 170 IGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLS---PSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKI 664 +GGL ++E + LPL +P +G++ P+GV+L G PG GKT L +AVA T A L V L G+ + VR +F+ A +L+ P+++F+DE+DA+ +R H E R + ++L LDG +V V+ TNR ++LDPAL RPGR DR++ Sbjct: 202 LGGLSEAADSLRELLRLPLRYPRALASLGLEVPRGVLLAGPPGVGKTQLVRAVARETGAELLAVSAPALQGARPGETEENVRRIFKRARELASRRPTLLFLDEVDALCPRRGGPHQAPE---SRVVAQVLTLLDGIGEDREVVVVGSTNRPDALDPALRRPGRFDREV 366 HSP 2 Score: 114.39 bits (285), Expect = 6.350e-25 Identity = 77/230 (33.48%), Postives = 120/230 (52.17%), Query Frame = 2 Query: 104 DEVDPMVSVMKVEKAPLES-----------YADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQ-RTMLELLNQLDG-----FDSRG--------------------------DVQVILGTNRIESLDPALLRPGRIDRKI 664 DE D + + K++ + S + IGGL+ ++K+++E PL P + +G+ PKGV+LYG PG KT L +A+A S +F+ V G++L ++GD K++ ++FR A +P+IVF+DEID++ R + S E +Q R + LLN+LDG + RG +V V+ TNR + LD ALLRPGR+D+ I Sbjct: 435 DETDFLEAFKKIQPSSFRSVIGVTDIKPVGWEQIGGLEDVKLKLKQSIEWPLKFPREFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSCRCSFVSVSGADLFSPFVGDSEKILSQVFRQARANTPAIVFLDEIDSILGSR--SISRTECNVQDRVLSVLLNELDGVGLKTIERRGSKSDQHGKCKQLEKNEELEFQEIFNSNVIVVAATNRPDVLDDALLRPGRLDKII 662
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: FIGL1_RAT (Fidgetin-like protein 1 OS=Rattus norvegicus GN=Fignl1 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.850e-25 Identity = 65/170 (38.24%), Postives = 99/170 (58.24%), Query Frame = 2 Query: 137 VEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDG--FDSRGDVQVILGTNRIESLDPALLR 640 ++ P + DI G++ IKE V P+ P+++ + PPKG++L+G PGTGKTL+ K +A+ + ATF + S L K++G+G K+VR LF VA P+++FIDEID++ ++R D R I+ E L QLDG S + V+ TNR + +D A R Sbjct: 395 MDHGPPVHWEDIAGVEFAKATIKEIVVWPMMRPDIFTGLR-GPPKGILLFGPPGTGKTLIGKCIASQSGATFFSISASSLTSKWVGEGEKMVRALFAVARCQQPAVIFIDEIDSLLSQRGDGEHESSRRIK---TEFLVQLDGATTSSEDRILVVGATNRPQEIDEAARR 560
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: FIGL1_MOUSE (Fidgetin-like protein 1 OS=Mus musculus GN=Fignl1 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.723e-25 Identity = 65/170 (38.24%), Postives = 99/170 (58.24%), Query Frame = 2 Query: 137 VEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDG--FDSRGDVQVILGTNRIESLDPALLR 640 ++ P + DI G++ IKE V P+ P+++ + PPKG++L+G PGTGKTL+ K +A+ + ATF + S L K++G+G K+VR LF VA P+++FIDEID++ ++R D R I+ E L QLDG S + V+ TNR + +D A R Sbjct: 401 MDHGPPVHWDDIAGVEFAKATIKEIVVWPMMRPDIFTGLR-GPPKGILLFGPPGTGKTLIGKCIASQSGATFFSISASSLTSKWVGEGEKMVRALFAVARCQQPAVIFIDEIDSLLSQRGDGEHESSRRIK---TEFLVQLDGATTSSEDRILVVGATNRPQEIDEAARR 566
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: FIGL1_XENTR (Fidgetin-like protein 1 OS=Xenopus tropicalis GN=fignl1 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.862e-25 Identity = 65/170 (38.24%), Postives = 100/170 (58.82%), Query Frame = 2 Query: 137 VEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGD--VQVILGTNRIESLDPALLR 640 ++ P ++ DI GL+ IKE V P+ P+++ + PPKG++L+G PGTGKTL+ K +A + ATF + S L K++G+G K+VR LF VA P+++FIDEID++ ++R + R I+ E L QLDG + D + V+ TNR + +D A R Sbjct: 374 MDHGPPLNWDDIAGLEFAKTTIKEIVVWPMLRPDIFTGLR-GPPKGILLFGPPGTGKTLIGKCIACQSGATFFSISASSLTSKWVGEGEKMVRALFTVARCHQPAVIFIDEIDSLLSQRGEGEHESSRRIK---TEFLVQLDGATTSSDDRILVVGATNRPQEIDEAARR 539
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: VPS4_DICDI (Vacuolar protein sorting-associated protein 4 OS=Dictyostelium discoideum GN=vps4 PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.350e-25 Identity = 69/176 (39.20%), Postives = 106/176 (60.23%), Query Frame = 2 Query: 137 VEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKI 664 V P + D+ GL + +KEAV P+ P+++ KP KG++LYG PGTGK+ LAKAVA S+TF + S+++ K+LGD KLV++LF +A + + S++FIDE+D++ + R D S R I+ L +N + G DS G + V+ TN LD A+ R R +++I Sbjct: 126 VTTKPNVKWDDVAGLYQAKEYLKEAVIFPIKFPQMFTG-NRKPWKGILLYGPPGTGKSYLAKAVATEISSTFFSISPSDIVTKWLGDSEKLVKQLFEMAREKNNSVIFIDEVDSLCSSRNDQESESARRIKTEFLIQMNGV-GNDSDG-ILVLAATNIPWGLDLAIRR--RFEKRI 296 The following BLAST results are available for this feature:
BLAST of FC920739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 381
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920739 ID=FC920739; Name=FC920739; organism=Citrus clementina; type=EST; length=724bpback to top |