FC920739
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: SPAST_CAEEL (Probable spastin homolog spas-1 OS=Caenorhabditis elegans GN=spas-1 PE=1 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 6.350e-25 Identity = 71/167 (42.51%), Postives = 99/167 (59.28%), Query Frame = 2 Query: 167 DIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTM-LELLNQLDGFDSRGD--VQVILGTNRIESLDPALLR--PGRI 652 D+ G + ++EAV LP +P L++ + +P KG++L+G PG GKTLLAKAVA + F + S L K++GD K +R LF++A + PSI+FIDEID++ +R S + E+ R M E L Q DG S D + VI TNR LD A+LR P RI Sbjct: 240 DVAGCHSAKAALEEAVILPALNPNLFKGLR-QPVKGILLFGPPGNGKTLLAKAVAGESKQMFFNISASSLTSKWVGDSEKTIRGLFQIARNAQPSIIFIDEIDSILCER----SEKDAEVSRRMKTEFLVQFDGATSSADDRILVIGATNRPHELDDAVLRRFPKRI 401
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: FIGL1_DROME (Fidgetin-like protein 1 OS=Drosophila melanogaster GN=CG3326 PE=2 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 6.350e-25 Identity = 67/164 (40.85%), Postives = 100/164 (60.98%), Query Frame = 2 Query: 158 SYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGERE-IQRTMLELLNQLDGFDSRGDVQVIL--GTNRIESLDPALLR 640 ++ DI GL++ EA+ +PL P+L+ + PP+GV+L+G PGTGKTL+AK++A+ A F + S L K++GD KLV+ LF VA P+I+FIDE+D++ +KR S E E R E L LDG S +++V++ TNR + LD A+ R Sbjct: 248 AWEDIAGLESAKSTFLEAIIMPLRRPDLFTGVRC-PPRGVLLFGPPGTGKTLIAKSIASQAKAKFFSINPSSLTSKWVGDAEKLVKTLFAVAAAHQPAIIFIDEVDSLLSKR----SANENESTLRLKNEFLIHLDGAASNEEIRVLVIGATNRPQELDEAVRR 406
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: MEI1_CAEEL (Meiotic spindle formation protein mei-1 OS=Caenorhabditis elegans GN=mei-1 PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.083e-24 Identity = 78/182 (42.86%), Postives = 108/182 (59.34%), Query Frame = 2 Query: 158 SYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPP-KGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDG----FDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFPISD 688 S DI G+ Q + EAV LPL PE ++ G++ P K ++L G PGTGKTL+A+A+A+ +S+TF V ++L K+ GD K+VR LF +A +PSI+FIDEID +G +R +SG +R E L Q+DG FDSR V V+ TN LD AL R R +++I P D Sbjct: 191 SLDDIIGMHDVKQVLHEAVTLPLLVPEFFQ--GLRSPWKAMVLAGPPGTGKTLIARAIASESSSTFFTVSSTDLSSKWRGDSEKIVRLLFELARFYAPSIIFIDEIDTLGGQR--GNSGEHEASRRVKSEFLVQMDGSQNKFDSR-RVFVLAATNIPWELDEALRR--RFEKRIFIPLPDID 365
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: FIGL1_XENLA (Fidgetin-like protein 1 OS=Xenopus laevis GN=fignl1 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.415e-24 Identity = 65/170 (38.24%), Postives = 99/170 (58.24%), Query Frame = 2 Query: 137 VEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDG--FDSRGDVQVILGTNRIESLDPALLR 640 ++ P ++ DI GL+ IKE V P+ P+++ + PPKG++L+G PGTGKTL+ K +A + ATF + S L K++G+G K+VR LF VA P+++FIDEID++ ++R + R I+ E L QLDG S + V+ TNR + +D A R Sbjct: 373 MDHGPPLNWDDIAGLEFAKTTIKEIVVWPMLRPDIFTGLR-GPPKGILLFGPPGTGKTLIGKCIACQSGATFFSISASSLTSKWVGEGEKMVRALFTVARCHQPAVIFIDEIDSLLSQRGEGEHESSRRIK---TEFLVQLDGATTSSEDRILVVGATNRPQEIDEAARR 538
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: SPAST_BRUMA (Probable spastin homolog Bm1_53365 OS=Brugia malayi GN=Bm1_53365 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.116e-24 Identity = 71/169 (42.01%), Postives = 106/169 (62.72%), Query Frame = 2 Query: 164 ADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSAT-FLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTM-LELLNQLDG-FDSRGDVQVILG-TNRIESLDPALLR--PGRI 652 +DI G + + ++E V LP +P L+ + +P +G++L+G PG GKTLLA+AVA +T FL V + L K++GD K+VR LF++A + P+I+FIDEID++ +R + E E+ R M E L Q+DG S+ D +++G TNR E LD A+LR P RI Sbjct: 178 SDIIGAETAKRALEETVILPTVNPSLFSGLR-QPAQGILLFGPPGNGKTLLARAVAGECGSTMFLNVSAASLTSKWVGDAEKIVRALFQIARNGQPTIIFIDEIDSILCERNEK----ETEVSRRMKTEFLIQMDGMLSSKDDRLLVIGATNRPEELDSAILRRFPKRI 341
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: SPAST_CAEBR (Probable spastin homolog spas-1 OS=Caenorhabditis briggsae GN=spas-1 PE=3 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 5.375e-24 Identity = 71/167 (42.51%), Postives = 98/167 (58.68%), Query Frame = 2 Query: 167 DIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTM-LELLNQLDGFDSRGD--VQVILGTNRIESLDPALLR--PGRI 652 D+ G + ++EAV LP +P L+ + +P KG++L+G PG GKTLLAKAVA + F + S L K++GD K +R LF++A + PSI+FIDEID++ +R S + E+ R M E L Q DG S D + VI TNR LD A+LR P RI Sbjct: 270 DVAGCHSAKATLEEAVILPALNPNLFSGLR-QPVKGILLFGPPGNGKTLLAKAVAGESKQMFFNISASSLTSKWVGDSEKTIRGLFQIARNGQPSIIFIDEIDSILCER----SEKDAEVSRRMKTEFLVQFDGATSSPDDRILVIGATNRPYELDDAVLRRFPKRI 431
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: SUR2_SCHPO (Protein sur2 OS=Schizosaccharomyces pombe GN=sur2 PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 7.021e-24 Identity = 59/126 (46.83%), Postives = 81/126 (64.29%), Query Frame = 2 Query: 161 YADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTM 538 ++DI GLD +KEAV P PEL++ + +P +G++L+G PGTGKT+LA+AVA ATF + S L KYLGD KLVR LF VA + S++F+DEID++ + R D SG E E R + Sbjct: 378 WSDIAGLDDAKNSLKEAVIYPFLRPELFQGLR-EPVQGMLLFGPPGTGKTMLARAVATEAKATFFSISASSLTSKYLGDSEKLVRALFEVAKRQTCSVIFVDEIDSILSARND--SGNEHESSRRL 500
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: SEC18_CANAL (Vesicular-fusion protein SEC18 OS=Candida albicans GN=SEC18 PE=3 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 7.021e-24 Identity = 65/180 (36.11%), Postives = 104/180 (57.78%), Query Frame = 2 Query: 170 IGGLDAQIQEI-KEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVV-GSELIQKYLGDGPKLVRELFRVAD--------DLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 IGGLDA+ Q+I + A + PEL E + K KG++LYG PGTGKTL+A+ ++ + ++V G E++ KY+G + +R LF+ A+ D ++ DE+D+V +R S G + +LL+++DG D ++ VI TNR++ +D ALLRPGR + +I+ P Sbjct: 277 IGGLDAEFQDIFRRAFNSRILPPELAEKLDYKHCKGLLLYGPPGTGKTLIARKLSKMLNGKEPKIVNGPEMLSKYVGASEENIRNLFKDAEAEYKLKGEDSDLHVIIFDELDSVFKQRGSGKSDGTGVGDNVVNQLLSKMDGVDQLNNILVIGMTNRLDLIDTALLRPGRFEIQIEISLP 456
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: SAP1_YEAST (Protein SAP1 OS=Saccharomyces cerevisiae GN=SAP1 PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 7.021e-24 Identity = 67/176 (38.07%), Postives = 99/176 (56.25%), Query Frame = 2 Query: 167 DIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAV-GTKRYDAHSGGEREIQRTMLELLNQL------------DGFDSRGD-----VQVILGTNRIESLDPALLR 640 DI GL++ +KEAV P P+L+ + +P +G++L+G PGTGKT+LA+AVA + +TF + S L KYLG+ KLVR LF +A LSPSI+F+DEID++ G++ + + R I+ L + L + D+ GD V V+ TN S+D A R Sbjct: 606 DIAGLESAKYSLKEAVVYPFLRPDLFRGLR-EPVRGMLLFGPPGTGKTMLARAVATESHSTFFSISASSLTSKYLGESEKLVRALFAIAKKLSPSIIFVDEIDSIMGSRNNENENESSRRIKNEFLVQWSSLSSAAAGSNKSNTNNSDTNGDEDDTRVLVLAATNLPWSIDEAARR 780
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: KTNA1_SALSA (Katanin p60 ATPase-containing subunit A1 OS=Salmo salar GN=katna1 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 7.021e-24 Identity = 74/188 (39.36%), Postives = 103/188 (54.79%), Query Frame = 2 Query: 137 VEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGD-------VQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 + + P + DI L+ + +KEAV LP+ PE ++ I +P KGV++ G PGTGKTLLAKAVA TF V S L KY G+ KLVR LF +A +P+ +FIDEID++ ++R S +R ELL Q+DG D V V+ TN +D AL R R++++I P Sbjct: 195 ISQNPNVKWDDIADLEEAKKLLKEAVVLPMWMPEFFKGIR-RPWKGVLMVGPPGTGKTLLAKAVATECRTTFFNVSSSTLTSKYRGESEKLVRILFEMARFYAPTTIFIDEIDSMCSRR--GTSEEHEASRRVKAELLVQMDGVGGASDNEDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLP 377 The following BLAST results are available for this feature:
BLAST of FC920739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 381
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920739 ID=FC920739; Name=FC920739; organism=Citrus clementina; type=EST; length=724bpback to top |