FC920739
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: MSP1_CAEEL (Mitochondrial sorting homolog OS=Caenorhabditis elegans GN=mspn-1 PE=1 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 5.943e-23 Identity = 60/159 (37.74%), Postives = 86/159 (54.09%), Query Frame = 2 Query: 167 DIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILG-TNRIESLDPALLR 640 +IGG + + E+K+ + LPL + PP+G++LYG PG GKTLLAKAVA + F+ + S L K+ G+ KL +F VA P+I+FIDEID+ D S + + DGF S GD +++G TNR +D A+LR Sbjct: 84 EIGGCEELVAELKDRIILPLRFASQSGSHLLSPPRGILLYGPPGCGKTLLAKAVARAAGCRFINLQVSNLTDKWYGESQKLAAAVFSVAQKFQPTIIFIDEIDSF---LRDRQSHDHESTAMMKAQFMTLWDGFSSSGDQIIVMGATNRPRDVDAAILR 239
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: KTNA1_RAT (Katanin p60 ATPase-containing subunit A1 OS=Rattus norvegicus GN=Katna1 PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.943e-23 Identity = 73/188 (38.83%), Postives = 102/188 (54.26%), Query Frame = 2 Query: 137 VEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGD-------VQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 + + P + DI L + ++EAV LP+ PE ++ I +P KGV++ G PGTGKTLLAKAVA TF V S L KY G+ KLVR LF +A SP+ +FIDEID++ ++R S +R ELL Q+DG + V V+ TN +D AL R R++++I P Sbjct: 200 ISQNPNVRWYDIADLVEAKKLLQEAVVLPMWMPEFFKGIR-RPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRR--GTSEEHEASRRVKAELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLP 382
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: NSF1_DROME (Vesicle-fusing ATPase 1 OS=Drosophila melanogaster GN=comt PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.762e-23 Identity = 66/180 (36.67%), Postives = 104/180 (57.78%), Query Frame = 2 Query: 170 IGGLDAQIQEI-KEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVV-GSELIQKYLGDGPKLVRELFRVADD----LSPS----IVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 IGGLD + I + A + PEL E +G K KG++LYG PGTGKTL+A+ + +A ++V G +++ KY+G+ VR LF A++ L P+ I+ DEIDA+ K+ + +G + +LL ++DG D ++ VI TNR + +D ALLRPGR++ +++ P Sbjct: 220 IGGLDKEFNSIFRRAFASRVFPPELVEQLGCKHVKGILLYGPPGTGKTLMARQIGTMLNAREPKIVNGPQILDKYVGESEANVRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAI-CKQRGSVAGNSGVHDTVVNQLLTKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLP 398
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: KTNA1_CHICK (Katanin p60 ATPase-containing subunit A1 OS=Gallus gallus GN=KATNA1 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.762e-23 Identity = 74/188 (39.36%), Postives = 102/188 (54.26%), Query Frame = 2 Query: 137 VEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGF-------DSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 + + P + DI L + +KEAV LP+ PE ++ I +P KGV++ G PGTGKTLLAKAVA TF V S L KY G+ KLVR LF +A +P+ +FIDEID++ ++R S +R ELL Q+DG D V V+ TN +D AL R R++++I P Sbjct: 201 ISQNPNIRWDDIADLVEAKKLLKEAVVLPMWMPEFFKGIR-RPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRR--GTSEEHEASRRVKAELLVQMDGVGGATENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLP 383
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: KATL1_SORAR (Katanin p60 ATPase-containing subunit A-like 1 OS=Sorex araneus GN=KATNAL1 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.762e-23 Identity = 72/188 (38.30%), Postives = 103/188 (54.79%), Query Frame = 2 Query: 137 VEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGF-------DSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 V + P + DI L+ + ++EAV LP+ P+ ++ I +P KGV++ G PGTGKT+LAKAVA TF V S L KY G+ KLVR LF +A +P+ +FIDEID++ ++R S +R ELL Q+DG D V V+ TN +D AL R R++++I P Sbjct: 199 VSRNPSIHWDDIADLEEAKKLLREAVVLPMWMPDFFKGIR-RPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRR--GTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLP 381
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: KATL1_RAT (Katanin p60 ATPase-containing subunit A-like 1 OS=Rattus norvegicus GN=Katnal1 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.762e-23 Identity = 72/188 (38.30%), Postives = 103/188 (54.79%), Query Frame = 2 Query: 137 VEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGF-------DSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 V + P + DI L+ + ++EAV LP+ P+ ++ I +P KGV++ G PGTGKT+LAKAVA TF V S L KY G+ KLVR LF +A +P+ +FIDEID++ ++R S +R ELL Q+DG D V V+ TN +D AL R R++++I P Sbjct: 197 VSRNPSIHWDDIADLEEAKKLLREAVVLPMWMPDFFKGIR-RPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRR--GTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLP 379
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: KATL1_RABIT (Katanin p60 ATPase-containing subunit A-like 1 OS=Oryctolagus cuniculus GN=KATNAL1 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.762e-23 Identity = 72/188 (38.30%), Postives = 103/188 (54.79%), Query Frame = 2 Query: 137 VEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGF-------DSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 V + P + DI L+ + ++EAV LP+ P+ ++ I +P KGV++ G PGTGKT+LAKAVA TF V S L KY G+ KLVR LF +A +P+ +FIDEID++ ++R S +R ELL Q+DG D V V+ TN +D AL R R++++I P Sbjct: 199 VSRNPSIHWDDIADLEEAKKLLREAVVLPMWMPDFFKGIR-RPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRR--GTSDEHEASRRVKSELLVQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLP 381
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: KATL1_PAPAN (Katanin p60 ATPase-containing subunit A-like 1 OS=Papio anubis GN=KATNAL1 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.762e-23 Identity = 72/188 (38.30%), Postives = 103/188 (54.79%), Query Frame = 2 Query: 137 VEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGF-------DSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 V + P + DI L+ + ++EAV LP+ P+ ++ I +P KGV++ G PGTGKT+LAKAVA TF V S L KY G+ KLVR LF +A +P+ +FIDEID++ ++R S +R ELL Q+DG D V V+ TN +D AL R R++++I P Sbjct: 199 VSRNPSIHWDDIADLEEAKKLLREAVVLPMWMPDFFKGIR-RPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRR--GTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLP 381
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: KATL1_OTOGA (Katanin p60 ATPase-containing subunit A-like 1 OS=Otolemur garnettii GN=KATNAL1 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.762e-23 Identity = 72/188 (38.30%), Postives = 103/188 (54.79%), Query Frame = 2 Query: 137 VEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGF-------DSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 V + P + DI L+ + ++EAV LP+ P+ ++ I +P KGV++ G PGTGKT+LAKAVA TF V S L KY G+ KLVR LF +A +P+ +FIDEID++ ++R S +R ELL Q+DG D V V+ TN +D AL R R++++I P Sbjct: 199 VSRNPSIHWDDIADLEEAKKLLREAVVLPMWMPDFFKGIR-RPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRR--GTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLP 381
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: KATL1_MOUSE (Katanin p60 ATPase-containing subunit A-like 1 OS=Mus musculus GN=Katnal1 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.762e-23 Identity = 72/188 (38.30%), Postives = 103/188 (54.79%), Query Frame = 2 Query: 137 VEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGF-------DSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 V + P + DI L+ + ++EAV LP+ P+ ++ I +P KGV++ G PGTGKT+LAKAVA TF V S L KY G+ KLVR LF +A +P+ +FIDEID++ ++R S +R ELL Q+DG D V V+ TN +D AL R R++++I P Sbjct: 197 VSRNPSIHWDDIADLEEAKKLLREAVVLPMWMPDFFKGIR-RPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRR--GTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLP 379 The following BLAST results are available for this feature:
BLAST of FC920739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 381
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920739 ID=FC920739; Name=FC920739; organism=Citrus clementina; type=EST; length=724bpback to top |