FC920739
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: KATL1_HUMAN (Katanin p60 ATPase-containing subunit A-like 1 OS=Homo sapiens GN=KATNAL1 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.762e-23 Identity = 72/188 (38.30%), Postives = 103/188 (54.79%), Query Frame = 2 Query: 137 VEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGF-------DSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 V + P + DI L+ + ++EAV LP+ P+ ++ I +P KGV++ G PGTGKT+LAKAVA TF V S L KY G+ KLVR LF +A +P+ +FIDEID++ ++R S +R ELL Q+DG D V V+ TN +D AL R R++++I P Sbjct: 199 VSRNPSIHWDDIADLEEAKKLLREAVVLPMWMPDFFKGIR-RPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRR--GTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLP 381
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: SEC18_SCHPO (Vesicular-fusion protein sec18 OS=Schizosaccharomyces pombe GN=sec18 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.258e-22 Identity = 66/181 (36.46%), Postives = 104/181 (57.46%), Query Frame = 2 Query: 170 IGGLDAQIQEI-KEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVV-GSELIQKYLGDGPKLVRELFRVA--------DDLSPSIVFIDEIDAVGTKRYDAHSGGEREI-QRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 IGGLD++ I + A L P + E +GI KG++LYG PGTGKTL+A+ + +A ++V G E++ KY+G + VR+LF A ++ I+ DE+DA+ KR SGG+ + + + +LL ++DG D ++ VI TNR + +D ALLRPGR++ ++ P Sbjct: 271 IGGLDSEFSAIFRRAFASRLFPPGMVEKLGINHVKGILLYGPPGTGKTLIARQIGKMLNAREPKIVNGPEILNKYVGQSEENVRKLFADAEREYRDRGEESGLHIIIFDELDAICKKR--GSSGGDTGVGDQVVNQLLAKMDGVDQLNNILVIGMTNRKDMIDEALLRPGRLEVHMEISLP 449
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: NSF2_DROME (Vesicle-fusing ATPase 2 OS=Drosophila melanogaster GN=Nsf2 PE=2 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 2.950e-22 Identity = 65/180 (36.11%), Postives = 104/180 (57.78%), Query Frame = 2 Query: 170 IGGLDAQIQEI-KEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVV-GSELIQKYLGDGPKLVRELFRVADD----LSPS----IVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 IGGLD + I + A + PEL E +GIK KG++LYG PGTGKTL+A+ + +A ++V G +++ KY+G+ +R LF A++ L P+ I+ DEIDA+ K + +G + +LL ++DG + ++ VI TNR + +D ALLRPGR++ +++ P Sbjct: 225 IGGLDKEFNAIFRRAFASRVFPPELVEQLGIKHVKGILLYGPPGTGKTLMARQIGTMLNAREPKIVNGPQILDKYVGESEANIRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAI-CKARGSVAGNSGVHDTVVNQLLAKIDGVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLP 403
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: KATL1_DANRE (Katanin p60 ATPase-containing subunit A-like 1 OS=Danio rerio GN=katnal1 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.950e-22 Identity = 72/188 (38.30%), Postives = 102/188 (54.26%), Query Frame = 2 Query: 137 VEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGF-------DSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 V + P + DI L+ + ++EAV LP+ P+ ++ I +P KGV++ G PGTGKT+LAKAVA TF V S L KY G+ KLVR LF +A +P+ +FIDEID++ +R S +R ELL Q+DG D V V+ TN +D AL R R++++I P Sbjct: 197 VSRNPNIHWDDIADLEDAKKLLREAVVLPMWMPDFFKGIR-RPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICGRR--GTSDEHEASRRVKSELLVQMDGVGGAQESEDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLP 379
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: KATL2_XENLA (Katanin p60 ATPase-containing subunit A-like 2 OS=Xenopus laevis GN=katnal2 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.852e-22 Identity = 59/136 (43.38%), Postives = 85/136 (62.50%), Query Frame = 2 Query: 149 PLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQ 556 P + DI GLDA + +KEAV P+ +P+L+ I + P KG++LYG PGTGKTLLAKAVA + TF + S ++ K+ GD KLVR LF +A +PS +F+DE+++V ++R G E+ ML L + Sbjct: 253 PNVRWDDIIGLDAAKRLVKEAVVYPIRYPQLFTGI-LSPWKGLLLYGPPGTGKTLLAKAVATECNTTFFNISASTIVSKWRGDSEKLVRVLFELARYHAPSTIFLDELESVMSQR----GTGPGELDYAMLRRLEK 383
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: YKX4_SCHPO (Uncharacterized AAA domain-containing protein C328.04 OS=Schizosaccharomyces pombe GN=SPAC328.04 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.031e-22 Identity = 54/122 (44.26%), Postives = 79/122 (64.75%), Query Frame = 2 Query: 167 DIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQR 532 DI GL+ +KEAV P P+L++ + +P +G++L+G PGTGKT+LA+AVA + + F + S L K+LG+ KLVR LF +A LSPSI+F+DEID++ + R + G E E R Sbjct: 460 DISGLEFAKHSLKEAVVYPFLRPDLFQGLR-EPARGMLLFGPPGTGKTMLARAVATESRSVFFSISASSLTSKFLGESEKLVRALFTLAKKLSPSIIFVDEIDSLLSAR--SSDGNEHETSR 578
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: ATD1A_DANRE (ATPase family AAA domain-containing protein 1-A OS=Danio rerio GN=atad1a PE=2 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 6.571e-22 Identity = 65/194 (33.51%), Postives = 108/194 (55.67%), Query Frame = 2 Query: 74 KLLSVVGLLQDEVDPMVSVMKVEKAPLE-SYADIGGLDAQIQEIKEAVELPLTHPELYEDIGI-KPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTM-LELLNQLDGFDSRGDVQVIL--GTNRIESLDPALLR 640 K + V G+ E + ++ + V+ ++ ++ D+ GLD I E+++ V LP L+ + +PPKGV+LYG PG GKTL+AKA A ++ F+ + S L K+ G+ KL +F +A + P I+F+DEID+ R S + E M + ++ DG D+ + QV++ TNR + +D A+LR Sbjct: 63 KQIGVEGVSLTEYEMNIATLLVDPRSIKVTWRDVAGLDEIISEMQDTVILPFQKRHLFSGSKLLQPPKGVLLYGPPGCGKTLIAKATAKASGCRFINLQASTLTDKWYGESQKLTAAVFSLAVKIQPCIIFLDEIDSFLRNR----SSMDHEATAMMKAQFMSLWDGLDTGENSQVMVMGATNRPQDVDAAILR 252
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: NSF_RAT (Vesicle-fusing ATPase OS=Rattus norvegicus GN=Nsf PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.582e-22 Identity = 65/181 (35.91%), Postives = 104/181 (57.46%), Query Frame = 2 Query: 170 IGGLDAQIQEI-KEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVV-GSELIQKYLGDGPKLVRELF--------RVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTML-ELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 IGGLD + +I + A + PE+ E +G K KG++LYG PG GKTLLA+ + +A +VV G E++ KY+G+ +R+LF R+ + I+ DEIDA+ +R G + T++ +LL+++DG + ++ VI TNR + +D ALLRPGR++ K++ P Sbjct: 220 IGGLDKEFSDIFRRAFASRVFPPEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQR--GSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLP 398
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: NSF_PONAB (Vesicle-fusing ATPase OS=Pongo abelii GN=NSF PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.582e-22 Identity = 65/181 (35.91%), Postives = 104/181 (57.46%), Query Frame = 2 Query: 170 IGGLDAQIQEI-KEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVV-GSELIQKYLGDGPKLVRELF--------RVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTML-ELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 IGGLD + +I + A + PE+ E +G K KG++LYG PG GKTLLA+ + +A +VV G E++ KY+G+ +R+LF R+ + I+ DEIDA+ +R G + T++ +LL+++DG + ++ VI TNR + +D ALLRPGR++ K++ P Sbjct: 220 IGGLDKEFSDIFRRAFASRVFPPEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQR--GSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLP 398
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: NSF_MOUSE (Vesicle-fusing ATPase OS=Mus musculus GN=Nsf PE=1 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 8.582e-22 Identity = 65/181 (35.91%), Postives = 104/181 (57.46%), Query Frame = 2 Query: 170 IGGLDAQIQEI-KEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVV-GSELIQKYLGDGPKLVRELF--------RVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTML-ELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 IGGLD + +I + A + PE+ E +G K KG++LYG PG GKTLLA+ + +A +VV G E++ KY+G+ +R+LF R+ + I+ DEIDA+ +R G + T++ +LL+++DG + ++ VI TNR + +D ALLRPGR++ K++ P Sbjct: 220 IGGLDKEFSDIFRRAFASRVFPPEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQR--GSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLP 398 The following BLAST results are available for this feature:
BLAST of FC920739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 381
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920739 ID=FC920739; Name=FC920739; organism=Citrus clementina; type=EST; length=724bpback to top |