FC920739
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: NSF_HUMAN (Vesicle-fusing ATPase OS=Homo sapiens GN=NSF PE=1 SV=3) HSP 1 Score: 103.99 bits (258), Expect = 8.582e-22 Identity = 65/181 (35.91%), Postives = 104/181 (57.46%), Query Frame = 2 Query: 170 IGGLDAQIQEI-KEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVV-GSELIQKYLGDGPKLVRELF--------RVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTML-ELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 IGGLD + +I + A + PE+ E +G K KG++LYG PG GKTLLA+ + +A +VV G E++ KY+G+ +R+LF R+ + I+ DEIDA+ +R G + T++ +LL+++DG + ++ VI TNR + +D ALLRPGR++ K++ P Sbjct: 220 IGGLDKEFSDIFRRAFASRVFPPEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQR--GSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLP 398
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: NSF_CRIGR (Vesicle-fusing ATPase OS=Cricetulus griseus GN=NSF PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.582e-22 Identity = 65/181 (35.91%), Postives = 104/181 (57.46%), Query Frame = 2 Query: 170 IGGLDAQIQEI-KEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVV-GSELIQKYLGDGPKLVRELF--------RVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTML-ELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 IGGLD + +I + A + PE+ E +G K KG++LYG PG GKTLLA+ + +A +VV G E++ KY+G+ +R+LF R+ + I+ DEIDA+ +R G + T++ +LL+++DG + ++ VI TNR + +D ALLRPGR++ K++ P Sbjct: 220 IGGLDKEFSDIFRRAFASRVFPPEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQR--GSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLP 398
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: NSF_DICDI (Vesicle-fusing ATPase OS=Dictyostelium discoideum GN=nsfA PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.259e-21 Identity = 62/180 (34.44%), Postives = 99/180 (55.00%), Query Frame = 2 Query: 170 IGGLDAQIQEI-KEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVV-GSELIQKYLGDGPKLVRELFRVA--------DDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 IGGLDA+ ++I + A + P + + +G+ KG++LYG PGTGKTL+A+ + + +VV G ++ KY+G + +R LFR A DD I+ DE+DA+ K + G + +LL +DG +S ++ VI TNR + +D ALLRPGR++ ++ P Sbjct: 224 IGGLDAEFRDIFRRAFSSRIFPPAIVKKLGVNHVKGMLLYGPPGTGKTLIARQIGKMLNGREPKVVSGPSILNKYVGQSEENIRMLFRDAEIEQKAKGDDSGLHIIIFDELDAI-CKSRGSRQGDSGVGDSVVNQLLAMIDGVESLNNILVIGMTNRKDMIDEALLRPGRLEVHVEISLP 402
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: NSF_CAEEL (Vesicle-fusing ATPase OS=Caenorhabditis elegans GN=nsf-1 PE=1 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 4.259e-21 Identity = 61/181 (33.70%), Postives = 104/181 (57.46%), Query Frame = 2 Query: 170 IGGLDAQIQEI-KEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVV-GSELIQKYLGDGPKLVRELFRVADD--------LSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTML-ELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 IGGLD + I + A + PE E +G+K +G++L+G PGTGKTL+A+ + +A ++V G +++ KY+G+ VR+LF A++ I+ DEIDA+ +R G + T++ +LL+++DG + ++ VI TNR + +D ALLRPGR++ +++ P Sbjct: 297 IGGLDTEFSHIFRRAFASRVFPPEFIEQLGMKHVRGILLFGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESESNVRKLFADAEEEWRRCGANSGLHIIIFDEIDAICKQR--GSMAGSSSVHDTVVNQLLSKMDGVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEVSLP 475
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: YCF2_MESVI (Protein ycf2 OS=Mesostigma viride GN=ycf2 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.563e-21 Identity = 66/207 (31.88%), Postives = 108/207 (52.17%), Query Frame = 2 Query: 113 DPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSG------------------GEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 D +S ++ A ++ DIGG+++ QE+ A L + Y + P G + G PGTGKTL+AKA++ +L V GS+ + G V +LF+ ++SP I++IDEID++ +R +A+ ++ +++ L +DG+ R D+ +I TNRIE+LD A++RPGR DR+I F P Sbjct: 332 DIEISTIQKFVAKAITFRDIGGMESLKQEL--ATVAFLLKQKNYSN---SYPMGYLFAGPPGTGKTLMAKAMSYEAETPYLYVEGSQFRCREEGVANARVDDLFKQIQNISPCILYIDEIDSIAERREEANKQLEQLKTIGDSIEGSNINIDQKPSDTVLMQFLIYMDGYKKRNDLIIIGATNRIETLDDAIMRPGRFDRQIVFSPP 533
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: SEC18_YEAST (Vesicular-fusion protein SEC18 OS=Saccharomyces cerevisiae GN=SEC18 PE=1 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.239e-20 Identity = 61/180 (33.89%), Postives = 101/180 (56.11%), Query Frame = 2 Query: 170 IGGLDAQIQEI-KEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVV-GSELIQKYLGDGPKLVRELFRVA--------DDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 +GGLD + +I + A + P + E +GI KG++LYG PGTGKTL+A+ + +A ++V G E++ KY+G + +R LF+ A ++ S I+ DE+D+V K+ + G + +LL ++DG D ++ VI TNR + +D ALLRPGR + +++ P Sbjct: 241 VGGLDKEFTKIFRRAFASRIFPPSVIEKLGISHVKGLLLYGPPGTGKTLIARKIGTMLNAKEPKIVNGPEILSKYVGSSEENIRNLFKDAEAEYRAKGEESSLHIIIFDELDSV-FKQRGSRGDGTGVGDNVVNQLLAKMDGVDQLNNILVIGMTNRKDLIDSALLRPGRFEVQVEIHLP 419
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: FIGN_DANRE (Fidgetin OS=Danio rerio GN=fign PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 8.033e-20 Identity = 58/176 (32.95%), Postives = 98/176 (55.68%), Query Frame = 2 Query: 119 MVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGD--VQVILGTNRIESLDPALLR 640 MV+ +++ ++DI GL+ IK+ V P+ P+++ + P + ++L+G GTG+TLL + +A+ A FL + GS L+ K+LG+G K+V+ F +A PS+VFI ++D + + E + R ELL QLDG S + V V+ T++ E +D +L R Sbjct: 449 MVTTEILQQTSPVDWSDIAGLEMAKATIKDEVLWPILRPDMFSGLATLP-RSILLFGPQGTGRTLLGRCMASQLGAAFLLLSGSALVTKWLGEGEKIVQASFLIARCRQPSVVFISDVDLL----LSSQLSEESPVNRIKSELLLQLDGVLSSPEEHVLVVCSTSKPEEIDESLRR 619
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: NSF_ARATH (Vesicle-fusing ATPase OS=Arabidopsis thaliana GN=NSF PE=2 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.370e-19 Identity = 66/195 (33.85%), Postives = 108/195 (55.38%), Query Frame = 2 Query: 125 SVMKVEKAPLESYADIGGLDAQIQEI-KEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVV-GSELIQKYLGDGPKLVRELF-------RVADDLSP-SIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 ++ K ++ LES IGGL A+ +I + A + P + +GIK KG++L+G PGTGKTL+A+ + + ++V G E++ K++G+ K VR+LF R D S ++ DEIDA+ R G + +LL ++DG ++ +V +I TNR + LD ALLRPGR++ +++ P Sbjct: 203 NIFKHKEFNLESLG-IGGLGAEFADIFRRAFASRVFPPHVTSRLGIKHVKGMLLFGPPGTGKTLMARQIGKMLNGKDPKIVNGPEVLSKFVGETEKNVRDLFADAEQDQRTLGDASELHVIIFDEIDAICKSRGSTRDGTGVH-DSIVNQLLTKIDGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVQVEISLP 395
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS2_METTH (Putative 26S protease regulatory subunit homolog MTH_1011 OS=Methanobacterium thermoautotrophicum GN=MTH_1011 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.789e-19 Identity = 53/153 (34.64%), Postives = 87/153 (56.86%), Query Frame = 2 Query: 224 LTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVG-TKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 L P+ + D P+ V+ +G PGTGKT+LAK++AN + + LI +++GDG + + EL+ +A +PS++FIDE+DA+G +RY + G ++ + LL ++DG + V I TN E LD A+ R + +I+F P Sbjct: 146 LEDPDRFRDWA---PRNVLFHGSPGTGKTMLAKSLANELKVPLYLIKATSLIGEHVGDGARQIHELYELASKTAPSVIFIDEMDAIGLDRRYQSLRG---DVSEVVNALLTEMDGINQNWGVVTIGATNNPELLDKAI--RSRFEEEIEFKLP 290
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS2_METTM (Putative 26S protease regulatory subunit homolog MTH1011 OS=Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133) PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.207e-19 Identity = 53/156 (33.97%), Postives = 88/156 (56.41%), Query Frame = 2 Query: 224 LTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVG-TKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFPISD 688 L P+ + D P+ V+ +G PGTGKT+LAK++AN + + LI +++GDG + + EL+ +A +PS++FIDE+DA+G +R+ + G ++ + LL ++DG + V I TN E LD A+ R + +I+F P D Sbjct: 146 LEDPDRFRDWA---PRNVLFHGSPGTGKTMLAKSLANELRVPLYLIKATSLIGEHVGDGARQIHELYELASKTAPSVIFIDEMDAIGLDRRFQSLRG---DVSEVVNALLTEMDGINQNWGVVTIGATNNPELLDNAI--RSRFEEEIEFKLPGDD 293 The following BLAST results are available for this feature:
BLAST of FC920739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 381
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920739 ID=FC920739; Name=FC920739; organism=Citrus clementina; type=EST; length=724bpback to top |