FC920739
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: FIGN_MOUSE (Fidgetin OS=Mus musculus GN=Fign PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.757e-18 Identity = 54/171 (31.58%), Postives = 92/171 (53.80%), Query Frame = 2 Query: 137 VEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEID-AVGTKRYDAHSGGEREIQRTMLELLNQLDGF--DSRGDVQVILGTNRIESLDPALLR 640 + + P ++DI GLD IKE V P+ + + + P + ++L+G GTGKTLL + +A+ ATF ++ GS L+ K++G+ K++ F VA PS++F+ +ID + ++ + HS + R E L QLD + + VI T++ E +D +L R Sbjct: 477 ITQGPPVDWSDIAGLDLVKAVIKEEVLWPVLRSDAFSGLTALP-RSILLFGPRGTGKTLLGRCIASQLGATFFKIAGSGLVAKWIGEAEKIIHASFLVARCRQPSVIFVSDIDMLLSSQVSEEHS----PVSRMRTEFLMQLDTVLTSAEDQIVVICATSKPEEIDESLRR 642
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: FIGN_HUMAN (Fidgetin OS=Homo sapiens GN=FIGN PE=2 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 7.518e-18 Identity = 55/171 (32.16%), Postives = 91/171 (53.22%), Query Frame = 2 Query: 137 VEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEID-AVGTKRYDAHSGGEREIQRTMLELLNQLDGF--DSRGDVQVILGTNRIESLDPALLR 640 + + P + DI GLD IKE V P+ + + + P + ++L+G GTGKTLL + +A+ ATF ++ GS L+ K+LG+ K++ F VA PS++F+ +ID + ++ + HS + R E L QLD + + VI T++ E +D +L R Sbjct: 477 ITQGPPVDWNDIAGLDLVKAVIKEEVLWPVLRSDAFSGLTALP-RSILLFGPRGTGKTLLGRCIASQLGATFFKIAGSGLVAKWLGEAEKIIHASFLVARCRQPSVIFVSDIDMLLSSQVNEEHS----PVSRMRTEFLMQLDTVLTSAEDQIVVICATSKPEEIDESLRR 642
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: YCF46_GUITH (Uncharacterized AAA domain-containing protein ycf46 OS=Guillardia theta GN=ycf46 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.418e-16 Identity = 56/171 (32.75%), Postives = 93/171 (54.39%), Query Frame = 2 Query: 149 PLESYADIGGLDAQIQEIKEAVEL-PLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGT-KRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRID 655 P+ +DIGGL+ E+K ++ + + E+ G+ PKG++L G GTGK+L AK++AN + L++ L +G+ VR++ + A+ +SP I++IDEID T ++ SG + + T + L+ + + V V+ N I+SL P LLR GR D Sbjct: 239 PVTKISDIGGLN----ELKSWLKFRAASFSKRAEEYGLPIPKGLLLVGIQGTGKSLTAKSIANEWNLPLLKLDVGRLFGGIIGESEARVRQMIQFAETISPCILWIDEIDKAFTGSNFNNDSGTTKRVFGTFITWLS-----EKKSPVFVVATANNIDSLPPELLRKGRFD 400
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: FTSHC_ARATH (Cell division protease ftsH homolog 12, chloroplastic OS=Arabidopsis thaliana GN=FTSH12 PE=2 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 5.957e-15 Identity = 53/171 (30.99%), Postives = 86/171 (50.29%), Query Frame = 2 Query: 179 LDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDG---------FDSRGDVQVILGTNRIESLDPALLRPGRIDRKI 664 L + ++ + + + + +P Y + + +GV+L G PGTGKTL A+ +A + F+ G+E K + E+F +A +P+ VF+DEIDA+ + H+ + + T L+ QLDG F R V I TNR + LD +R GRIDR++ Sbjct: 497 LGGDVWDLLDELMIYMGNPMQYYEKDVAFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDSEKSGAAK-INEMFSIARRNAPAFVFVDEIDAIAGR----HARKDPRRRATFEALIAQLDGEKEKTGIDRFSLRQAVIFICATNRPDELDLEFVRSGRIDRRL 662
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: YCF46_PORPU (Uncharacterized AAA domain-containing protein ycf46 OS=Porphyra purpurea GN=ycf46 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.016e-14 Identity = 55/164 (33.54%), Postives = 85/164 (51.83%), Query Frame = 2 Query: 167 DIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRY-DAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRID 655 DIGGLDA +K+ + + + GI PKG++L G GTGK+L AKA+AN + LR+ +L +G+ +RE+ +A+ LSP +++IDEID + Y SG + T + L+ + V V+ N I++L +LR GR D Sbjct: 229 DIGGLDALKSWLKKRSR---SFSKQSFNYGIPTPKGLLLVGIQGTGKSLTAKAIANDWTLPLLRLDIGKLFGGLVGESESRMREMVTIAEGLSPCVLWIDEIDKAFSNLYSQGDSGTSARVFGTFITWLS-----EKTTPVFVVATANTIQNLPSEMLRKGRFD 384
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: YCF46_PORYE (Uncharacterized AAA domain-containing protein ycf46 OS=Porphyra yezoensis GN=ycf46 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.264e-14 Identity = 54/164 (32.93%), Postives = 85/164 (51.83%), Query Frame = 2 Query: 167 DIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEID-AVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRID 655 DIGGLD Q +++ + + + GI PKG++L G GTGK+L AKA+A+ LR+ +L +G+ +RE+ +++ LSP I++IDEID A SG + T + L+ + + V V+ N+I+SL +LR GR D Sbjct: 229 DIGGLDVLKQWLQKRSR---SFSKQSLNYGIPSPKGLLLVGIQGTGKSLTAKAIASDWMLPLLRLDMGKLFGGLVGESESKMREMINISEGLSPCILWIDEIDKAFSGLHSQGDSGTSARVFGTFITWLS-----EKKAPVFVVATANKIQSLPSEMLRKGRFD 384
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: FIGL2_HUMAN (Putative fidgetin-like protein 2 OS=Homo sapiens GN=FIGNL2 PE=5 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.123e-13 Identity = 60/184 (32.61%), Postives = 92/184 (50.00%), Query Frame = 2 Query: 110 VDP----MVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYD-AHSGGEREIQRTMLELLNQLDGFDSRG--DVQVILGTNRIESLDPALLR 640 VDP +V+ V+ P +AD+ G A ++E + PL P Y ++PP+ V+L+G G GK LL + +A AT LR+ G+ L +G +L++ F A PS++ I E++A+ R D A +GG ++ LL LDG G V V+ T+R +LD A R Sbjct: 370 VDPGALELVTSKMVDCGPPVQWADVAGQGALKAALEEELVWPLLRPPAYPG-SLRPPRTVLLFGPRGAGKALLGRCLATQLGATLLRLRGATLAAPGAAEGARLLQAAFAAARCRPPSVLLISELEALLPARDDGAAAGGALQV-----PLLACLDGGCGAGADGVLVVGTTSRPAALDEATRR 547
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: YR476_MIMIV (Putative AAA family ATPase R476 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R476 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.503e-13 Identity = 64/203 (31.53%), Postives = 102/203 (50.25%), Query Frame = 2 Query: 110 VDPMVSVMKVEKAP---LESYADIGGLDAQIQEIKEAVELPL-THPELYEDIGIKPPKGVILYGEPGTGKTLLAK---AVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDL-------SP-SIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGR--IDRKID 667 ++ V ++ K P LE Y +GG+ +++ + + L + Y G++P KG+IL+G PGTGKT L++ + F + G E+ K++G +R +F+ A D SP +V IDEIDA+ R + S G + + L ++DG + ++ I TNR+E LDPA +R GR I KID Sbjct: 549 INNSVEQTEISKNPVQELEKY--VGGISKELETVVRTLCLSRGILKQEYLARGLRPVKGIILHGPPGTGKTSLSRNLGKILGCEGDRFRLMSGPEIFNKWVGGSESNIRAIFKPAKDAWKKHGDKSPVYMVVIDEIDAMLPSR--SGSDGNPVRDSVVNQFLAEMDGLEVFNNLICIGITNRLELLDPATIRSGRFGIHIKID 747
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: YCF46_GRATL (Uncharacterized AAA domain-containing protein ycf46 OS=Gracilaria tenuistipitata var. liui GN=ycf46 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.269e-13 Identity = 50/157 (31.85%), Postives = 82/157 (52.23%), Query Frame = 2 Query: 245 EDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYD-AHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP-ISD*ETYFQI 709 ++ G+ PKG++L G GTGK+L+AKA++ + L++ ++ +G + +R + + A+ SP I++IDEID T+ + SG + TML L+ + + V VI N++ SL LLR GR D P + + E FQI Sbjct: 253 KNYGLTVPKGILLIGIQGTGKSLIAKAISGQWNLPLLKLDMGKIFASLVGQSEERMRHMIKTAEQSSPCILWIDEIDKCFTRLNNYTDSGTNGRVLSTMLTWLS-----EKKKPVFVIATANQVLSLPSELLRKGRFDEIFFLNLPSLEEREKIFQI 404
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: BCS1_XENLA (Mitochondrial chaperone BCS1 OS=Xenopus laevis GN=bcs1l PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.059e-11 Identity = 59/178 (33.15%), Postives = 84/178 (47.19%), Query Frame = 2 Query: 143 KAPLESYADIGGLDAQI-QEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQR----TMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRK 661 + PL S G+ +I Q++K +E +P+ Y D GI +G +LYG PG GK+ A+A + + L L D + L VA SI+ ++++DA R D + Q T LLN LDG S V + TN I+ LDPAL+RPGR+D K Sbjct: 185 RRPLSSVVLEQGISEKIVQDVKGFIE----NPKWYSDRGIPYRRGYLLYGPPGCGKSSFITALAGELEYSICLM---SLSDSSLSDDR--LNHLLSVAPQ--QSIILLEDVDAAFVSR-DLNKQNPTAYQGMGRLTFSGLLNALDGVASTEARIVFMTTNHIDRLDPALIRPGRVDVK 350 The following BLAST results are available for this feature:
BLAST of FC920739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 381
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920739 ID=FC920739; Name=FC920739; organism=Citrus clementina; type=EST; length=724bpback to top |