FC920739
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS8_MOUSE (26S protease regulatory subunit 8 OS=Mus musculus GN=Psmc5 PE=1 SV=1) HSP 1 Score: 262.307 bits (669), Expect = 1.885e-69 Identity = 125/223 (56.05%), Postives = 174/223 (78.03%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDF 670 + V + +D + + P C + + N ++ +L ++VDP+VS+M VEK P +Y IGGLD QI+EIKE +ELP+ HPEL+E +GI PKGV+LYG PGTGKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A + +PSI+F+DEID++G+ R + SGG+ E+QRTMLELLNQLDGF++ +++VI+ TNRI+ LD ALLRPGRIDRKI+F Sbjct: 95 FVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEF 317
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS8_HUMAN (26S protease regulatory subunit 8 OS=Homo sapiens GN=PSMC5 PE=1 SV=1) HSP 1 Score: 262.307 bits (669), Expect = 1.885e-69 Identity = 125/223 (56.05%), Postives = 174/223 (78.03%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDF 670 + V + +D + + P C + + N ++ +L ++VDP+VS+M VEK P +Y IGGLD QI+EIKE +ELP+ HPEL+E +GI PKGV+LYG PGTGKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A + +PSI+F+DEID++G+ R + SGG+ E+QRTMLELLNQLDGF++ +++VI+ TNRI+ LD ALLRPGRIDRKI+F Sbjct: 95 FVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEF 317
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS8_BOVIN (26S protease regulatory subunit 8 OS=Bos taurus GN=PSMC5 PE=2 SV=1) HSP 1 Score: 262.307 bits (669), Expect = 1.885e-69 Identity = 125/223 (56.05%), Postives = 174/223 (78.03%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDF 670 + V + +D + + P C + + N ++ +L ++VDP+VS+M VEK P +Y IGGLD QI+EIKE +ELP+ HPEL+E +GI PKGV+LYG PGTGKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A + +PSI+F+DEID++G+ R + SGG+ E+QRTMLELLNQLDGF++ +++VI+ TNRI+ LD ALLRPGRIDRKI+F Sbjct: 95 FVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEF 317
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS8_MANSE (26S protease regulatory subunit 8 OS=Manduca sexta PE=2 SV=1) HSP 1 Score: 261.922 bits (668), Expect = 2.463e-69 Identity = 123/215 (57.21%), Postives = 173/215 (80.47%), Query Frame = 2 Query: 26 VDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDF 670 VD + + C + + N+ ++ +L ++VDP+VS+M VEK P +Y +GGLD QI+EIKE +ELP+ HPEL++ +GI PKGV+LYG PGTGKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A + +PSI+F+DEID++G+ R ++ SGG+ E+QRTMLELLNQLDGF++ +++VI+ TNRI+ LDPALLRPGRIDRKI+F Sbjct: 99 VDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEF 313
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PSMR_THEON (Proteasome-activating nucleotidase OS=Thermococcus onnurineus (strain NA1) GN=pan PE=3 SV=1) HSP 1 Score: 261.536 bits (667), Expect = 3.216e-69 Identity = 121/226 (53.54%), Postives = 173/226 (76.55%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 + V I +++++ L+PG + + + +++V LL E DP V +V + P SY DIGGLD Q+QE++EA+ELPL HPEL+E +GI+PPKGV+LYG PG GKTL+AKA+A+ +ATF+RVVGSEL++K++G+G +LV ELF +A + +P+I+FIDEIDA+G KR D +GGERE+ RT+++LL ++DGFD G+V++I TNR + LDPALLRPGR DR I+ P Sbjct: 85 FVVRIAPWIERENLKPGARVALDQRTMAIVELLPSEKDPSVLGFEVIERPTVSYNDIGGLDKQLQELREAIELPLKHPELFEKVGIEPPKGVLLYGPPGCGKTLMAKALAHEVNATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPAIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPSGNVKIIAATNRPDILDPALLRPGRFDRLIEVPLP 310
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS8_ENCCU (26S protease regulatory subunit 8 homolog OS=Encephalitozoon cuniculi GN=RPT6 PE=1 SV=1) HSP 1 Score: 261.151 bits (666), Expect = 4.200e-69 Identity = 127/223 (56.95%), Postives = 173/223 (77.58%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDF 670 Y V + V+ D+L+ G + + + V +L +VDP+VS+M VEK P +Y IGGLD QI+EI+E +ELP+ HPEL+E++GI PKGV+LYG PGTGKTLLA+AVA+ T F+RV GSEL+QKY+G+G +LVRELF +A + +PSI+F+DEID++G+ R D++ G + E+QRTMLELLNQLDGF+S +++VI+ TNRI+ LDPALLR GRIDRKI+F Sbjct: 142 YLVKVEPGVNYDELKAGVRVALRSDSYDVHRILPTKVDPLVSLMMVEKVPDSTYQMIGGLDEQIKEIREVIELPIKHPELFENLGIAQPKGVLLYGPPGTGKTLLARAVAHHTQCKFIRVSGSELVQKYIGEGSRLVRELFIMAREHAPSIIFMDEIDSIGSTRGDSNKGSDSEVQRTMLELLNQLDGFESHNNIKVIMATNRIDILDPALLRTGRIDRKIEF 364
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PSMR_PYRAB (Proteasome-activating nucleotidase OS=Pyrococcus abyssi GN=pan PE=3 SV=1) HSP 1 Score: 260.766 bits (665), Expect = 5.486e-69 Identity = 121/226 (53.54%), Postives = 172/226 (76.11%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 + V I ++++D+L PG + + + ++++ LL DP V +V + P +Y DIGGL Q+QE++EA+ELPL HPEL+E++GI PPKGV+LYG PG GKTL+AKA+A+ +ATF+RVVGSEL++KY+G+G +LV ELF +A + +P+I+FIDEIDA+G KR D +GGERE+ RT+++LL ++DGFD RG+V+VI TNR + LDPALLRPGR DR I+ P Sbjct: 86 FVVRIAPWIERDKLRPGARVALDQRTMAIIELLPSSKDPTVLGFEVIERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLP 311
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PSMR_PYRFU (Proteasome-activating nucleotidase OS=Pyrococcus furiosus GN=pan PE=3 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 7.165e-69 Identity = 121/226 (53.54%), Postives = 171/226 (75.66%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 + V I ++DK +L PG + + + ++++ +L DP V +V + P +Y DIGGL Q+QE++EA+ELPL HPEL+E++GI PPKGV+LYG PG GKTL+AKA+A+ +ATF+RVVGSEL++KY+G+G +LV ELF +A + +P+I+FIDEIDA+G KR D +GGERE+ RT+++LL ++DGFD RG+V+VI TNR + LDPALLRPGR DR I+ P Sbjct: 83 FVVRIAPWIDKSKLRPGTRVALDQRTMAIIEILPASKDPAVLGFEVVERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKAIAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRLDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLP 308
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PSMR_METVS (Proteasome-activating nucleotidase OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=pan PE=3 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 7.165e-69 Identity = 125/229 (54.59%), Postives = 176/229 (76.86%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFPISD 688 + V + FV+ D + PG + ++ + L+VV +L E D M++E+ P + DIGGL+ QI++IKE VELPL +PEL+E +GI PPKGV+LYG PGTGKTLLAKAVA T+A+F+RVVGSEL++K++G+G KLVR++F++A + SP I+FIDEIDAV +KR ++ +GG+RE+QRT+++LL ++DGFDSRGDV++I TNR + LDPA+LRPGR DR I+ P D Sbjct: 94 FLVNLSQFVEPDDIVPGARVCLNQQTLAVVEVLPKEKDYRAMAMELEEKPDILFGDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVARETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEIAAPDED 322
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS8_SCHPO (26S protease regulatory subunit 8 homolog OS=Schizosaccharomyces pombe GN=let1 PE=2 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 7.165e-69 Identity = 125/230 (54.35%), Postives = 177/230 (76.96%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSG-GEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFPISD 688 Y V I +D +++P + + N ++ +L ++VDP+VS+M VEK P +Y +GGL+ QI+EIKE +ELP+ HPEL+E +GI PKG++LYG PGTGKTLLA+AVA+ T F+RV GSEL+QKY+G+G ++VRELF +A + +PSI+F+DEID++G+ R D+ G G+ E+QRTMLELLNQLDGF++ +++VI+ TNRI+ LDPALLRPGRIDRKI+F P ++ Sbjct: 91 YVVDISPDIDIKEIKPNIRVALRNDSYQLIKILPNKVDPLVSLMMVEKIPDSTYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSDSSGGSGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPSAE 320 The following BLAST results are available for this feature:
BLAST of FC920739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 381
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920739 ID=FC920739; Name=FC920739; organism=Citrus clementina; type=EST; length=724bpback to top |