FC920739
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PSMR_AERPE (Proteasome-activating nucleotidase OS=Aeropyrum pernix GN=pan PE=3 SV=1) HSP 1 Score: 250.751 bits (639), Expect = 5.677e-66 Identity = 120/224 (53.57%), Postives = 169/224 (75.45%), Query Frame = 2 Query: 8 VGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 V + + VD L+PG + ++N+ ++V +L DP+V M+VE+ P + D+GGL+ QI+EI EAV LP+ +P L+ ++GI PPKGV+L+G PGTGKTLLAKAVA T ATF+RVVGSEL+ K++G+G +LVRE+FR+A + +PSI+FIDEIDA+ +KR D + G+RE+QRTML+LL +LDGFD +V+VI TNR++ +DPA+LRPGR DR I+ P Sbjct: 87 VNVAAGVDARSLKPGAIVALNNRGSTIVDVLPGRYDPLVKAMEVEERPKVFFKDVGGLEEQIREIYEAVVLPIKNPHLFRELGIDPPKGVLLHGPPGTGKTLLAKAVAGETEATFIRVVGSELVNKFIGEGARLVREIFRLAREKAPSILFIDEIDAIASKRVDIGTSGDREVQRTMLQLLAELDGFDPLDNVKVIAATNRLDLIDPAVLRPGRFDRIIEVPLP 310
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PSMR_METHJ (Proteasome-activating nucleotidase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=pan PE=3 SV=1) HSP 1 Score: 250.366 bits (638), Expect = 7.414e-66 Identity = 128/236 (54.24%), Postives = 171/236 (72.46%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFPISD*ETYFQI 709 + V + V+ L+ G ++ + L++V +L D V M++ AP E+Y DIGGL+ QI EI+EAVELP+T P+L+E IGI PPKGV+LYG PGTGKTLLAKAVA+ T A FL VGSEL+QKY+G+G +LVRELF +A + +PSIVFIDEIDA+G R +A + G+RE+QRT+++LL +DGF+ RGDV++I TNRI+ LD ALLRPGR DR I+ P+ D E + I Sbjct: 99 FLVRVSQAVNPTTLKAGVRCTLNQQSLAIVEVLPSTYDSQVYGMELVDAPTETYEDIGGLEKQIMEIREAVELPMTRPDLFEKIGINPPKGVLLYGPPGTGKTLLAKAVAHETHAIFLHTVGSELVQKYIGEGARLVRELFDLAKEKAPSIVFIDEIDAIGASRTEAMTSGDREVQRTLMQLLAAMDGFEPRGDVKIIGATNRIDILDAALLRPGRFDRIIE--IPLPDTEGRYSI 332
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS8_YEAST (26S protease regulatory subunit 8 homolog OS=Saccharomyces cerevisiae GN=RPT6 PE=1 SV=4) HSP 1 Score: 249.98 bits (637), Expect = 9.683e-66 Identity = 118/223 (52.91%), Postives = 169/223 (75.78%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDF 670 Y V + ++ L+ + + + + +L+++ DP+VS+M VEK P +Y +GGL QI+EIKE +ELP+ HPEL+E +GI PKGVILYG PGTGKTLLA+AVA+ T F+RV G+EL+QKY+G+G ++VRELF +A + +PSI+F+DEID++G+ R + GG+ E+QRTMLELLNQLDGF++ ++++I+ TNR++ LDPALLRPGRIDRKI+F Sbjct: 94 YIVDVAKDINVKDLKASQRVCLRSDSYMLHKVLENKADPLVSLMMVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEGSGGGDSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEF 316
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PSMR_METPE (Proteasome-activating nucleotidase OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=pan PE=3 SV=1) HSP 1 Score: 249.595 bits (636), Expect = 1.265e-65 Identity = 121/226 (53.54%), Postives = 171/226 (75.66%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 + VGI ++ ++++PG ++ + L++V +L D + M+V +AP E Y +IGGL+ QI EI+EAVELPL PE++ +GI+PPKGV+L+G PGTGKTLLA+AVA+ T A FLRVVGSEL+QKY+G+G +LVRELF +A SPSI+FIDEIDA+G R ++++ G+RE+ RT+++LL ++DGF +RGDV++I TNRI+ LD ALLRPGR DR I+ P Sbjct: 99 FLVGISQSLNIEEIKPGARCTLNQQSLAIVEILPTNYDAQIYGMEVIEAPSERYEEIGGLEKQINEIREAVELPLKKPEVFRKMGIEPPKGVLLHGPPGTGKTLLARAVAHQTEAHFLRVVGSELVQKYIGEGARLVRELFELAKKKSPSIIFIDEIDAIGASRTESNTSGDREVHRTLMQLLAEMDGFSNRGDVRIIGATNRIDILDRALLRPGRFDRIIEIPAP 324
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS7_CAEEL (26S protease regulatory subunit 7 OS=Caenorhabditis elegans GN=rpt-1 PE=1 SV=1) HSP 1 Score: 247.669 bits (631), Expect = 4.806e-65 Identity = 116/226 (51.33%), Postives = 165/226 (73.01%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 + V + V +E G + + + L ++DP V++M+VE+ P +Y+D+GG QI++++E VE PL HPE Y ++GI+PPKGV+LYG PGTGKTL A+AVAN T A F+RV+GSEL+QKY+G+G ++VRELF +A ++F DEIDAVG R+D GG+ E+QRTMLEL+NQLDGFD RG+++V++ TNR ++LDPAL+RPGR+DRK++F P Sbjct: 123 FVVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEKPDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFALP 348
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PSMR_METMA (Proteasome-activating nucleotidase OS=Methanosarcina mazei GN=pan PE=3 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 1.071e-64 Identity = 116/226 (51.33%), Postives = 168/226 (74.34%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 + V + ++D+ +L PG + ++ L++ ++ +P V+ M+V ++ Y IGGLD QIQE++EAVELPLT PE + IGI+PPKGV+LYG PGTGKTLLAKAVA+ T+ATF+RVVGSEL+QKY+GDG KLVRE+F +A +PSI+FIDE+D++ +R + +G +RE+QRT+++LL ++DGFD R ++++I TNR + LDPA+LRPGR DR + P Sbjct: 105 FLVNVSQYIDEKKLLPGAKVALNQHTLAIAEVIPSTEEPFVAAMEVIESVEVDYDQIGGLDEQIQELQEAVELPLTSPERFARIGIEPPKGVLLYGLPGTGKTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETTGADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMP 330
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PSMR_SULSO (Proteasome-activating nucleotidase OS=Sulfolobus solfataricus GN=pan PE=3 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 1.398e-64 Identity = 115/224 (51.34%), Postives = 170/224 (75.89%), Query Frame = 2 Query: 8 VGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 V I S +D+ ++PG ++ ++ + +++ +L + DP+V M++ + P +Y++IGGL+ QI+E++E VELPL +PE++ +IG++PPKGV+LYG PGTGKT+LAKAVA ++A F+ VV SE QK++G+G ++VRELF +A +PSI+FIDEIDA+G KR D + GEREIQRT+++LL +LDGFD +V++I TNRI+ LDPALLRPGR DR I+ P Sbjct: 82 VNIASHIDQKLIKPGISVALNQRGSTILEVLPQKEDPIVKTMEIIERPNVTYSEIGGLEEQIRELREVVELPLKNPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFDPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLP 305
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS7_SPIOL (26S protease regulatory subunit 7 OS=Spinacia oleracea GN=RPT1 PE=2 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 1.398e-64 Identity = 116/226 (51.33%), Postives = 165/226 (73.01%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 + VG+ V +E G + + + L ++DP V++M VE+ P +Y D+GG QI++++E VELP+ HPE + +GI PPKGV+ YG PGTGKTLLA+AVAN T A F+RV+GSEL+QKY+G+G ++VRELF++A IVF DE+DA+G R+D GG+ E+QRTMLE++NQLDGFD+RG+++V++ TNR ++LDPALLRPGR+DRK++F P Sbjct: 114 FVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 339
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS7_PRUPE (26S protease regulatory subunit 7 OS=Prunus persica GN=RPT1 PE=2 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 1.398e-64 Identity = 116/226 (51.33%), Postives = 165/226 (73.01%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 + VG+ V +E G + + + L ++DP V++M VE+ P +Y D+GG QI++++E VELP+ HPE + +GI PPKGV+ YG PGTGKTLLA+AVAN T A F+RV+GSEL+QKY+G+G ++VRELF++A IVF DE+DA+G R+D GG+ E+QRTMLE++NQLDGFD+RG+++V++ TNR ++LDPALLRPGR+DRK++F P Sbjct: 113 FVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 338
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS7_ORYSJ (26S protease regulatory subunit 7 OS=Oryza sativa subsp. japonica GN=RPT1A PE=2 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 1.398e-64 Identity = 116/226 (51.33%), Postives = 165/226 (73.01%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 + VG+ V +E G + + + L ++DP V++M VE+ P +Y D+GG QI++++E VELP+ HPE + +GI PPKGV+ YG PGTGKTLLA+AVAN T A F+RV+GSEL+QKY+G+G ++VRELF++A IVF DE+DA+G R+D GG+ E+QRTMLE++NQLDGFD+RG+++V++ TNR ++LDPALLRPGR+DRK++F P Sbjct: 114 FVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 339 The following BLAST results are available for this feature:
BLAST of FC920739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 381
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920739 ID=FC920739; Name=FC920739; organism=Citrus clementina; type=EST; length=724bpback to top |