FC920739
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS7A_ARATH (26S protease regulatory subunit 7 homolog A OS=Arabidopsis thaliana GN=RPT1A PE=2 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 1.398e-64 Identity = 116/226 (51.33%), Postives = 165/226 (73.01%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 + VG+ V +E G + + + L ++DP V++M VE+ P +Y D+GG QI++++E VELP+ HPE + +GI PPKGV+ YG PGTGKTLLA+AVAN T A F+RV+GSEL+QKY+G+G ++VRELF++A IVF DE+DA+G R+D GG+ E+QRTMLE++NQLDGFD+RG+++V++ TNR ++LDPALLRPGR+DRK++F P Sbjct: 114 FVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 339
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS7_YEAST (26S protease regulatory subunit 7 homolog OS=Saccharomyces cerevisiae GN=RPT1 PE=1 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 2.385e-64 Identity = 118/226 (52.21%), Postives = 162/226 (71.68%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 + VG+ V +E G + + ++ L +DP V++M VE+ P +Y+D+GG QI++++E VELPL PE + +GI PPKG++LYG PGTGKTL A+AVAN T ATF+RV+GSEL+QKY+G+G ++VRELF +A I+F DEIDAVG R+D +GG+ E+QRTMLEL+ QLDGFD RG+++V+ TNR +LDPALLRPGRIDRK++F P Sbjct: 155 FVVGLGERVSPTDIEEGMRVGVDRSKYNIELPLPPRIDPSVTMMTVEEKPDVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLP 380
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PSMR2_HALSA (Proteasome-activating nucleotidase 2 OS=Halobacterium salinarium GN=pan2 PE=3 SV=2) HSP 1 Score: 244.973 bits (624), Expect = 3.115e-64 Identity = 116/213 (54.46%), Postives = 162/213 (76.06%), Query Frame = 2 Query: 41 LEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 LEPG + ++N L SVV L DE D VM+V+ +P Y DIGGLD Q++E++E VELP+ P L+E +GI PP GV+L+G PGTGKTL+AKAVA+ T A+F+++ GSEL+ K++G+G KLVR+LF+VA D P++VFIDEIDA+ +KR D+ + G+ E+QRTM++LL+++DGFD RGD+++I TNR + LD A+LRPGR DR I+ P Sbjct: 109 LEPGSRVAVNNSL-SVVRQLDDEADVRARVMEVDDSPDVGYEDIGGLDDQLREVRETVELPMKDPGLFETVGINPPSGVLLHGPPGTGKTLMAKAVASQTDASFIKMAGSELVHKFIGEGAKLVRDLFQVARDHEPAVVFIDEIDAIASKRTDSKTSGDAEVQRTMMQLLSEMDGFDERGDIRIIAATNRFDMLDRAILRPGRFDRLIEVPHP 320
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS7_XENLA (26S protease regulatory subunit 7 OS=Xenopus laevis GN=psmc2 PE=2 SV=1) HSP 1 Score: 244.588 bits (623), Expect = 4.068e-64 Identity = 114/226 (50.44%), Postives = 166/226 (73.45%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 + V + V +E G + + + L ++DP V++M+VE+ P +Y+D+GG QI++++E VE PL HPE + ++GI+PPKGV+L+G PGTGKTL A+AVAN T A F+RV+GSEL+QKY+G+G ++VRELF +A ++F DEIDA+G R+D +GG+ E+QRTMLEL+NQLDGFD RG+++V++ TNR ++LDPAL+RPGR+DRKI+F P Sbjct: 121 FVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLP 346
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS7_PONAB (26S protease regulatory subunit 7 OS=Pongo abelii GN=PSMC2 PE=2 SV=3) HSP 1 Score: 244.588 bits (623), Expect = 4.068e-64 Identity = 114/226 (50.44%), Postives = 166/226 (73.45%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 + V + V +E G + + + L ++DP V++M+VE+ P +Y+D+GG QI++++E VE PL HPE + ++GI+PPKGV+L+G PGTGKTL A+AVAN T A F+RV+GSEL+QKY+G+G ++VRELF +A ++F DEIDA+G R+D +GG+ E+QRTMLEL+NQLDGFD RG+++V++ TNR ++LDPAL+RPGR+DRKI+F P Sbjct: 121 FVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLP 346
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS7_MOUSE (26S protease regulatory subunit 7 OS=Mus musculus GN=Psmc2 PE=1 SV=5) HSP 1 Score: 244.588 bits (623), Expect = 4.068e-64 Identity = 114/226 (50.44%), Postives = 166/226 (73.45%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 + V + V +E G + + + L ++DP V++M+VE+ P +Y+D+GG QI++++E VE PL HPE + ++GI+PPKGV+L+G PGTGKTL A+AVAN T A F+RV+GSEL+QKY+G+G ++VRELF +A ++F DEIDA+G R+D +GG+ E+QRTMLEL+NQLDGFD RG+++V++ TNR ++LDPAL+RPGR+DRKI+F P Sbjct: 121 FVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLP 346
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS7_MACFA (26S protease regulatory subunit 7 OS=Macaca fascicularis GN=PSMC2 PE=2 SV=3) HSP 1 Score: 244.588 bits (623), Expect = 4.068e-64 Identity = 114/226 (50.44%), Postives = 166/226 (73.45%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 + V + V +E G + + + L ++DP V++M+VE+ P +Y+D+GG QI++++E VE PL HPE + ++GI+PPKGV+L+G PGTGKTL A+AVAN T A F+RV+GSEL+QKY+G+G ++VRELF +A ++F DEIDA+G R+D +GG+ E+QRTMLEL+NQLDGFD RG+++V++ TNR ++LDPAL+RPGR+DRKI+F P Sbjct: 121 FVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLP 346
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS7_HUMAN (26S protease regulatory subunit 7 OS=Homo sapiens GN=PSMC2 PE=1 SV=3) HSP 1 Score: 244.588 bits (623), Expect = 4.068e-64 Identity = 114/226 (50.44%), Postives = 166/226 (73.45%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 + V + V +E G + + + L ++DP V++M+VE+ P +Y+D+GG QI++++E VE PL HPE + ++GI+PPKGV+L+G PGTGKTL A+AVAN T A F+RV+GSEL+QKY+G+G ++VRELF +A ++F DEIDA+G R+D +GG+ E+QRTMLEL+NQLDGFD RG+++V++ TNR ++LDPAL+RPGR+DRKI+F P Sbjct: 121 FVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLP 346
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS7_BOVIN (26S protease regulatory subunit 7 OS=Bos taurus GN=PSMC2 PE=2 SV=3) HSP 1 Score: 244.588 bits (623), Expect = 4.068e-64 Identity = 114/226 (50.44%), Postives = 166/226 (73.45%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 + V + V +E G + + + L ++DP V++M+VE+ P +Y+D+GG QI++++E VE PL HPE + ++GI+PPKGV+L+G PGTGKTL A+AVAN T A F+RV+GSEL+QKY+G+G ++VRELF +A ++F DEIDA+G R+D +GG+ E+QRTMLEL+NQLDGFD RG+++V++ TNR ++LDPAL+RPGR+DRKI+F P Sbjct: 121 FVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLP 346
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS6A_ENCCU (26S protease regulatory subunit 6A OS=Encephalitozoon cuniculi GN=RPT5 PE=1 SV=1) HSP 1 Score: 244.588 bits (623), Expect = 4.068e-64 Identity = 119/227 (52.42%), Postives = 162/227 (71.37%), Query Frame = 2 Query: 5 YVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVS--VMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 Y+ I + +L PG + +H V L + D V V+K + P E+Y DIGGL+ QI+E+ EA+ L LTHPE +E + IKPPKGV++YG PGTGKTL+A+A A+ T+ATFL++ G +L+Q Y+GDG +LVR+ F +A + P+I+FIDEIDA+G KR D+ G+RE+QRTMLELLNQLDGF S +V++I TNR++ LDPALLR GR+DRKI+F P Sbjct: 93 YLPITGLIPNSELRPGDLVALHKDTNIVFEKLPPDYDMKVGGMVLKSDAKPDETYEDIGGLERQIEELNEAIVLSLTHPERFEKLNIKPPKGVLMYGPPGTGKTLMARACASKTNATFLKLAGPQLVQMYIGDGARLVRDAFALAKERKPTIIFIDEIDAIGAKRSDSDQTGDREVQRTMLELLNQLDGFSSSEEVKIIAATNRVDILDPALLRSGRLDRKIEFPLP 319 The following BLAST results are available for this feature:
BLAST of FC920739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 381
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920739 ID=FC920739; Name=FC920739; organism=Citrus clementina; type=EST; length=724bpback to top |